Result of FASTA (omim) for
pFN21AE0096
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0096, 1835 aa
1>>>pF1KE0096 1835 - 1835 aa - 1835 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 15.0452+/-0.000597; mu= -22.5240+/- 0.037
mean_var=616.3857+/-130.053, 0's: 0 Z-trim(119.0): 140 B-trim: 0 in 0/58
Lambda= 0.051659
statistics sampled from 32454 (32592) to 32454 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.689), E-opt: 0.2 (0.382), width: 16
Scan time: 21.720
The best scores are: opt bits E(85289)
NP_689854 (OMIM: 609539) AT-rich interactive domai (1835) 12195 926.0 0
XP_006719335 (OMIM: 609539) PREDICTED: AT-rich int (1793) 11908 904.6 0
XP_011536327 (OMIM: 609539) PREDICTED: AT-rich int (1291) 8561 655.1 1.3e-186
>>NP_689854 (OMIM: 609539) AT-rich interactive domain-co (1835 aa)
initn: 12195 init1: 12195 opt: 12195 Z-score: 4933.0 bits: 926.0 E(85289): 0
Smith-Waterman score: 12195; 100.0% identity (100.0% similar) in 1835 aa overlap (1-1835:1-1835)
10 20 30 40 50 60
pF1KE0 MANSTGKAPPDERRKGLAFLDELRQFHHSRGSPFKKIPAVGGKELDLHGLYTRVTTLGGF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 MANSTGKAPPDERRKGLAFLDELRQFHHSRGSPFKKIPAVGGKELDLHGLYTRVTTLGGF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 AKVSEKNQWGEIVEEFNFPRSCSNAAFALKQYYLRYLEKYEKVHHFGEDDDEVPPGNPKP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 AKVSEKNQWGEIVEEFNFPRSCSNAAFALKQYYLRYLEKYEKVHHFGEDDDEVPPGNPKP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 QLPIGAIPSSYNYQQHSVSDYLRQSYGLSMDFNSPNDYNKLVLSLLSGLPNEVDFAINVC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 QLPIGAIPSSYNYQQHSVSDYLRQSYGLSMDFNSPNDYNKLVLSLLSGLPNEVDFAINVC
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 TLLSNESKHVMQLEKDPKIITLLLANAGVFDDTLGSFSTVFGEEWKEKTDRDFVKFWKDI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 TLLSNESKHVMQLEKDPKIITLLLANAGVFDDTLGSFSTVFGEEWKEKTDRDFVKFWKDI
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 VDDNEVRDLISDRNKSHEGTSGEWIWESLFHPPRKLGINDIEGQRVLQIAVILRNLSFEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 VDDNEVRDLISDRNKSHEGTSGEWIWESLFHPPRKLGINDIEGQRVLQIAVILRNLSFEE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE0 GNVKLLAANRTCLRFLLLSAHSHFISLRQLGLDTLGNIAAELLLDPVDFKTTHLMFHTVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 GNVKLLAANRTCLRFLLLSAHSHFISLRQLGLDTLGNIAAELLLDPVDFKTTHLMFHTVT
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE0 KCLMSRDRFLKMRGMEILGNLCKAEDNGVLICEYVDQDSYREIICHLTLPDVLLVISTLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 KCLMSRDRFLKMRGMEILGNLCKAEDNGVLICEYVDQDSYREIICHLTLPDVLLVISTLE
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE0 VLYMLTEMGDVACTKIAKVEKSIDMLVCLVSMDIQMFGPDALAAVKLIEHPSSSHQMLSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 VLYMLTEMGDVACTKIAKVEKSIDMLVCLVSMDIQMFGPDALAAVKLIEHPSSSHQMLSE
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE0 IRPQAIEQVQTQTHVASAPASRAVVAQHVAPPPGIVEIDSEKFACQWLNAHFEVNPDCSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 IRPQAIEQVQTQTHVASAPASRAVVAQHVAPPPGIVEIDSEKFACQWLNAHFEVNPDCSV
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE0 SRAEMYSEYLSTCSKLARGGILTSTGFYKCLRTVFPNHTVKRVEDSSSNGQAHIHVVGVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 SRAEMYSEYLSTCSKLARGGILTSTGFYKCLRTVFPNHTVKRVEDSSSNGQAHIHVVGVK
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE0 RRAIPLPIQMYYQQQPVSTSVVRVDSVPDVSPAPSPAGIPHGSQTIGNHFQRTPVANQSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 RRAIPLPIQMYYQQQPVSTSVVRVDSVPDVSPAPSPAGIPHGSQTIGNHFQRTPVANQSS
610 620 630 640 650 660
670 680 690 700 710 720
pF1KE0 NLTATQMSFPVQGVHTVAQTVSRIPQNPSPHTHQQQNAPVTVIQSKAPIPCEVVKATVIQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 NLTATQMSFPVQGVHTVAQTVSRIPQNPSPHTHQQQNAPVTVIQSKAPIPCEVVKATVIQ
670 680 690 700 710 720
730 740 750 760 770 780
pF1KE0 NSIPQTGVPVSIAVGGGPPQSSVVQNHSTGPQPVTVVNSQTLLHHPSVIPQQSPLHTVVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 NSIPQTGVPVSIAVGGGPPQSSVVQNHSTGPQPVTVVNSQTLLHHPSVIPQQSPLHTVVP
730 740 750 760 770 780
790 800 810 820 830 840
pF1KE0 GQIPSGTPVTVIQQAVPQSHMFGRVQNIPACTSTVSQGQQLITTSPQPVQTSSQQTSAGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 GQIPSGTPVTVIQQAVPQSHMFGRVQNIPACTSTVSQGQQLITTSPQPVQTSSQQTSAGS
790 800 810 820 830 840
850 860 870 880 890 900
pF1KE0 QSQDTVIIAPPQYVTTSASNIVSATSVQNFQVATGQMVTIAGVPSPQASRVGFQNIAPKP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 QSQDTVIIAPPQYVTTSASNIVSATSVQNFQVATGQMVTIAGVPSPQASRVGFQNIAPKP
850 860 870 880 890 900
910 920 930 940 950 960
pF1KE0 LPSQQVSSTVVQQPIQQPQQPTQQSVVIVSQPAQQGQTYAPAIHQIVLANPAALPAGQTV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 LPSQQVSSTVVQQPIQQPQQPTQQSVVIVSQPAQQGQTYAPAIHQIVLANPAALPAGQTV
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KE0 QLTGQPNITPSSSPSPVPATNNQVPTAMSSSSTPQSQGPPPTVSQMLSVKRQQQQQHSPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 QLTGQPNITPSSSPSPVPATNNQVPTAMSSSSTPQSQGPPPTVSQMLSVKRQQQQQHSPA
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KE0 PPPQQVQVQVQQPQQVQMQVQPQQSNAGVGQPASGESSLIKQLLLPKRGPSTPGGKLILP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 PPPQQVQVQVQQPQQVQMQVQPQQSNAGVGQPASGESSLIKQLLLPKRGPSTPGGKLILP
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KE0 APQIPPPNNARAPSPQVVYQVASNQAAGFGVQGQTPAQQLLVGQQNVQLVPSAMPPSGGV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 APQIPPPNNARAPSPQVVYQVASNQAAGFGVQGQTPAQQLLVGQQNVQLVPSAMPPSGGV
1090 1100 1110 1120 1130 1140
1150 1160 1170 1180 1190 1200
pF1KE0 QTVPISNLQILPGPLISNSPATIFQGTSGNQVTITVVPNTSFAPATVSQGNATQLIAPAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 QTVPISNLQILPGPLISNSPATIFQGTSGNQVTITVVPNTSFAPATVSQGNATQLIAPAG
1150 1160 1170 1180 1190 1200
1210 1220 1230 1240 1250 1260
pF1KE0 ITMSGTQTGVGLPVQTLPATQASPAGQSSCTTATPPFKGDKIICQKEEEAKEATGLHVHE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 ITMSGTQTGVGLPVQTLPATQASPAGQSSCTTATPPFKGDKIICQKEEEAKEATGLHVHE
1210 1220 1230 1240 1250 1260
1270 1280 1290 1300 1310 1320
pF1KE0 RKIEVMENPSCRRGATNTSNGDTKENEMHVGSLLNGRKYSDSSLPPSNSGKIQSETNQCS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 RKIEVMENPSCRRGATNTSNGDTKENEMHVGSLLNGRKYSDSSLPPSNSGKIQSETNQCS
1270 1280 1290 1300 1310 1320
1330 1340 1350 1360 1370 1380
pF1KE0 LISNGPSLELGENGASGKQNSEQIDMQDIKSDLRKPLVNGICDFDKGDGSHLSKNIPNHK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 LISNGPSLELGENGASGKQNSEQIDMQDIKSDLRKPLVNGICDFDKGDGSHLSKNIPNHK
1330 1340 1350 1360 1370 1380
1390 1400 1410 1420 1430 1440
pF1KE0 TSNHVGNGEISPMEPQGTLDITQQDTAKGDQLERISNGPVLTLGGSSVSSIQEASNAATQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 TSNHVGNGEISPMEPQGTLDITQQDTAKGDQLERISNGPVLTLGGSSVSSIQEASNAATQ
1390 1400 1410 1420 1430 1440
1450 1460 1470 1480 1490 1500
pF1KE0 QFSGTDLLNGPLASSLNSDVPQQRPSVVVSPHSTTSVIQGHQIIAVPDSGSKVSHSPALS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 QFSGTDLLNGPLASSLNSDVPQQRPSVVVSPHSTTSVIQGHQIIAVPDSGSKVSHSPALS
1450 1460 1470 1480 1490 1500
1510 1520 1530 1540 1550 1560
pF1KE0 SDVRSTNGTAECKTVKRPAEDTDRETVAGIPNKVGVRIVTISDPNNAGCSATMVAVPAGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 SDVRSTNGTAECKTVKRPAEDTDRETVAGIPNKVGVRIVTISDPNNAGCSATMVAVPAGA
1510 1520 1530 1540 1550 1560
1570 1580 1590 1600 1610 1620
pF1KE0 DPSTVAKVAIESAVQQKQQHPPTYVQNVVPQNTPMPPSPAVQVQGQPNSSQPSPFSGSSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 DPSTVAKVAIESAVQQKQQHPPTYVQNVVPQNTPMPPSPAVQVQGQPNSSQPSPFSGSSQ
1570 1580 1590 1600 1610 1620
1630 1640 1650 1660 1670 1680
pF1KE0 PGDPMRKPGQNFMCLWQSCKKWFQTPSQVFYHAATEHGGKDVYPGQCLWEGCEPFQRQRF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 PGDPMRKPGQNFMCLWQSCKKWFQTPSQVFYHAATEHGGKDVYPGQCLWEGCEPFQRQRF
1630 1640 1650 1660 1670 1680
1690 1700 1710 1720 1730 1740
pF1KE0 SFITHLQDKHCSKDALLAGLKQDEPGQAGSQKSSTKQPTVGGTSSTPRAQKAIVNHPSAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 SFITHLQDKHCSKDALLAGLKQDEPGQAGSQKSSTKQPTVGGTSSTPRAQKAIVNHPSAA
1690 1700 1710 1720 1730 1740
1750 1760 1770 1780 1790 1800
pF1KE0 LMALRRGSRNLVFRDFTDEKEGPITKHIRLTAALILKNIGKYSECGRRLLKRHENNLSVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 LMALRRGSRNLVFRDFTDEKEGPITKHIRLTAALILKNIGKYSECGRRLLKRHENNLSVL
1750 1760 1770 1780 1790 1800
1810 1820 1830
pF1KE0 AISNMEASSTLAKCLYELNFTVQSKEQEKDSEMLQ
:::::::::::::::::::::::::::::::::::
NP_689 AISNMEASSTLAKCLYELNFTVQSKEQEKDSEMLQ
1810 1820 1830
>>XP_006719335 (OMIM: 609539) PREDICTED: AT-rich interac (1793 aa)
initn: 11908 init1: 11908 opt: 11908 Z-score: 4817.5 bits: 904.6 E(85289): 0
Smith-Waterman score: 11908; 100.0% identity (100.0% similar) in 1788 aa overlap (1-1788:1-1788)
10 20 30 40 50 60
pF1KE0 MANSTGKAPPDERRKGLAFLDELRQFHHSRGSPFKKIPAVGGKELDLHGLYTRVTTLGGF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MANSTGKAPPDERRKGLAFLDELRQFHHSRGSPFKKIPAVGGKELDLHGLYTRVTTLGGF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 AKVSEKNQWGEIVEEFNFPRSCSNAAFALKQYYLRYLEKYEKVHHFGEDDDEVPPGNPKP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 AKVSEKNQWGEIVEEFNFPRSCSNAAFALKQYYLRYLEKYEKVHHFGEDDDEVPPGNPKP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 QLPIGAIPSSYNYQQHSVSDYLRQSYGLSMDFNSPNDYNKLVLSLLSGLPNEVDFAINVC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 QLPIGAIPSSYNYQQHSVSDYLRQSYGLSMDFNSPNDYNKLVLSLLSGLPNEVDFAINVC
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 TLLSNESKHVMQLEKDPKIITLLLANAGVFDDTLGSFSTVFGEEWKEKTDRDFVKFWKDI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 TLLSNESKHVMQLEKDPKIITLLLANAGVFDDTLGSFSTVFGEEWKEKTDRDFVKFWKDI
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 VDDNEVRDLISDRNKSHEGTSGEWIWESLFHPPRKLGINDIEGQRVLQIAVILRNLSFEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 VDDNEVRDLISDRNKSHEGTSGEWIWESLFHPPRKLGINDIEGQRVLQIAVILRNLSFEE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE0 GNVKLLAANRTCLRFLLLSAHSHFISLRQLGLDTLGNIAAELLLDPVDFKTTHLMFHTVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GNVKLLAANRTCLRFLLLSAHSHFISLRQLGLDTLGNIAAELLLDPVDFKTTHLMFHTVT
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE0 KCLMSRDRFLKMRGMEILGNLCKAEDNGVLICEYVDQDSYREIICHLTLPDVLLVISTLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 KCLMSRDRFLKMRGMEILGNLCKAEDNGVLICEYVDQDSYREIICHLTLPDVLLVISTLE
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE0 VLYMLTEMGDVACTKIAKVEKSIDMLVCLVSMDIQMFGPDALAAVKLIEHPSSSHQMLSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 VLYMLTEMGDVACTKIAKVEKSIDMLVCLVSMDIQMFGPDALAAVKLIEHPSSSHQMLSE
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE0 IRPQAIEQVQTQTHVASAPASRAVVAQHVAPPPGIVEIDSEKFACQWLNAHFEVNPDCSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 IRPQAIEQVQTQTHVASAPASRAVVAQHVAPPPGIVEIDSEKFACQWLNAHFEVNPDCSV
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE0 SRAEMYSEYLSTCSKLARGGILTSTGFYKCLRTVFPNHTVKRVEDSSSNGQAHIHVVGVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 SRAEMYSEYLSTCSKLARGGILTSTGFYKCLRTVFPNHTVKRVEDSSSNGQAHIHVVGVK
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE0 RRAIPLPIQMYYQQQPVSTSVVRVDSVPDVSPAPSPAGIPHGSQTIGNHFQRTPVANQSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 RRAIPLPIQMYYQQQPVSTSVVRVDSVPDVSPAPSPAGIPHGSQTIGNHFQRTPVANQSS
610 620 630 640 650 660
670 680 690 700 710 720
pF1KE0 NLTATQMSFPVQGVHTVAQTVSRIPQNPSPHTHQQQNAPVTVIQSKAPIPCEVVKATVIQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 NLTATQMSFPVQGVHTVAQTVSRIPQNPSPHTHQQQNAPVTVIQSKAPIPCEVVKATVIQ
670 680 690 700 710 720
730 740 750 760 770 780
pF1KE0 NSIPQTGVPVSIAVGGGPPQSSVVQNHSTGPQPVTVVNSQTLLHHPSVIPQQSPLHTVVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 NSIPQTGVPVSIAVGGGPPQSSVVQNHSTGPQPVTVVNSQTLLHHPSVIPQQSPLHTVVP
730 740 750 760 770 780
790 800 810 820 830 840
pF1KE0 GQIPSGTPVTVIQQAVPQSHMFGRVQNIPACTSTVSQGQQLITTSPQPVQTSSQQTSAGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GQIPSGTPVTVIQQAVPQSHMFGRVQNIPACTSTVSQGQQLITTSPQPVQTSSQQTSAGS
790 800 810 820 830 840
850 860 870 880 890 900
pF1KE0 QSQDTVIIAPPQYVTTSASNIVSATSVQNFQVATGQMVTIAGVPSPQASRVGFQNIAPKP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 QSQDTVIIAPPQYVTTSASNIVSATSVQNFQVATGQMVTIAGVPSPQASRVGFQNIAPKP
850 860 870 880 890 900
910 920 930 940 950 960
pF1KE0 LPSQQVSSTVVQQPIQQPQQPTQQSVVIVSQPAQQGQTYAPAIHQIVLANPAALPAGQTV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LPSQQVSSTVVQQPIQQPQQPTQQSVVIVSQPAQQGQTYAPAIHQIVLANPAALPAGQTV
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KE0 QLTGQPNITPSSSPSPVPATNNQVPTAMSSSSTPQSQGPPPTVSQMLSVKRQQQQQHSPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 QLTGQPNITPSSSPSPVPATNNQVPTAMSSSSTPQSQGPPPTVSQMLSVKRQQQQQHSPA
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KE0 PPPQQVQVQVQQPQQVQMQVQPQQSNAGVGQPASGESSLIKQLLLPKRGPSTPGGKLILP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PPPQQVQVQVQQPQQVQMQVQPQQSNAGVGQPASGESSLIKQLLLPKRGPSTPGGKLILP
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KE0 APQIPPPNNARAPSPQVVYQVASNQAAGFGVQGQTPAQQLLVGQQNVQLVPSAMPPSGGV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 APQIPPPNNARAPSPQVVYQVASNQAAGFGVQGQTPAQQLLVGQQNVQLVPSAMPPSGGV
1090 1100 1110 1120 1130 1140
1150 1160 1170 1180 1190 1200
pF1KE0 QTVPISNLQILPGPLISNSPATIFQGTSGNQVTITVVPNTSFAPATVSQGNATQLIAPAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 QTVPISNLQILPGPLISNSPATIFQGTSGNQVTITVVPNTSFAPATVSQGNATQLIAPAG
1150 1160 1170 1180 1190 1200
1210 1220 1230 1240 1250 1260
pF1KE0 ITMSGTQTGVGLPVQTLPATQASPAGQSSCTTATPPFKGDKIICQKEEEAKEATGLHVHE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 ITMSGTQTGVGLPVQTLPATQASPAGQSSCTTATPPFKGDKIICQKEEEAKEATGLHVHE
1210 1220 1230 1240 1250 1260
1270 1280 1290 1300 1310 1320
pF1KE0 RKIEVMENPSCRRGATNTSNGDTKENEMHVGSLLNGRKYSDSSLPPSNSGKIQSETNQCS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 RKIEVMENPSCRRGATNTSNGDTKENEMHVGSLLNGRKYSDSSLPPSNSGKIQSETNQCS
1270 1280 1290 1300 1310 1320
1330 1340 1350 1360 1370 1380
pF1KE0 LISNGPSLELGENGASGKQNSEQIDMQDIKSDLRKPLVNGICDFDKGDGSHLSKNIPNHK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LISNGPSLELGENGASGKQNSEQIDMQDIKSDLRKPLVNGICDFDKGDGSHLSKNIPNHK
1330 1340 1350 1360 1370 1380
1390 1400 1410 1420 1430 1440
pF1KE0 TSNHVGNGEISPMEPQGTLDITQQDTAKGDQLERISNGPVLTLGGSSVSSIQEASNAATQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 TSNHVGNGEISPMEPQGTLDITQQDTAKGDQLERISNGPVLTLGGSSVSSIQEASNAATQ
1390 1400 1410 1420 1430 1440
1450 1460 1470 1480 1490 1500
pF1KE0 QFSGTDLLNGPLASSLNSDVPQQRPSVVVSPHSTTSVIQGHQIIAVPDSGSKVSHSPALS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 QFSGTDLLNGPLASSLNSDVPQQRPSVVVSPHSTTSVIQGHQIIAVPDSGSKVSHSPALS
1450 1460 1470 1480 1490 1500
1510 1520 1530 1540 1550 1560
pF1KE0 SDVRSTNGTAECKTVKRPAEDTDRETVAGIPNKVGVRIVTISDPNNAGCSATMVAVPAGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 SDVRSTNGTAECKTVKRPAEDTDRETVAGIPNKVGVRIVTISDPNNAGCSATMVAVPAGA
1510 1520 1530 1540 1550 1560
1570 1580 1590 1600 1610 1620
pF1KE0 DPSTVAKVAIESAVQQKQQHPPTYVQNVVPQNTPMPPSPAVQVQGQPNSSQPSPFSGSSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 DPSTVAKVAIESAVQQKQQHPPTYVQNVVPQNTPMPPSPAVQVQGQPNSSQPSPFSGSSQ
1570 1580 1590 1600 1610 1620
1630 1640 1650 1660 1670 1680
pF1KE0 PGDPMRKPGQNFMCLWQSCKKWFQTPSQVFYHAATEHGGKDVYPGQCLWEGCEPFQRQRF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PGDPMRKPGQNFMCLWQSCKKWFQTPSQVFYHAATEHGGKDVYPGQCLWEGCEPFQRQRF
1630 1640 1650 1660 1670 1680
1690 1700 1710 1720 1730 1740
pF1KE0 SFITHLQDKHCSKDALLAGLKQDEPGQAGSQKSSTKQPTVGGTSSTPRAQKAIVNHPSAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 SFITHLQDKHCSKDALLAGLKQDEPGQAGSQKSSTKQPTVGGTSSTPRAQKAIVNHPSAA
1690 1700 1710 1720 1730 1740
1750 1760 1770 1780 1790 1800
pF1KE0 LMALRRGSRNLVFRDFTDEKEGPITKHIRLTAALILKNIGKYSECGRRLLKRHENNLSVL
::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LMALRRGSRNLVFRDFTDEKEGPITKHIRLTAALILKNIGKYSECGRRNMNED
1750 1760 1770 1780 1790
1810 1820 1830
pF1KE0 AISNMEASSTLAKCLYELNFTVQSKEQEKDSEMLQ
>>XP_011536327 (OMIM: 609539) PREDICTED: AT-rich interac (1291 aa)
initn: 8561 init1: 8561 opt: 8561 Z-score: 3471.4 bits: 655.1 E(85289): 1.3e-186
Smith-Waterman score: 8561; 100.0% identity (100.0% similar) in 1291 aa overlap (545-1835:1-1291)
520 530 540 550 560 570
pF1KE0 IVEIDSEKFACQWLNAHFEVNPDCSVSRAEMYSEYLSTCSKLARGGILTSTGFYKCLRTV
::::::::::::::::::::::::::::::
XP_011 MYSEYLSTCSKLARGGILTSTGFYKCLRTV
10 20 30
580 590 600 610 620 630
pF1KE0 FPNHTVKRVEDSSSNGQAHIHVVGVKRRAIPLPIQMYYQQQPVSTSVVRVDSVPDVSPAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FPNHTVKRVEDSSSNGQAHIHVVGVKRRAIPLPIQMYYQQQPVSTSVVRVDSVPDVSPAP
40 50 60 70 80 90
640 650 660 670 680 690
pF1KE0 SPAGIPHGSQTIGNHFQRTPVANQSSNLTATQMSFPVQGVHTVAQTVSRIPQNPSPHTHQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SPAGIPHGSQTIGNHFQRTPVANQSSNLTATQMSFPVQGVHTVAQTVSRIPQNPSPHTHQ
100 110 120 130 140 150
700 710 720 730 740 750
pF1KE0 QQNAPVTVIQSKAPIPCEVVKATVIQNSIPQTGVPVSIAVGGGPPQSSVVQNHSTGPQPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QQNAPVTVIQSKAPIPCEVVKATVIQNSIPQTGVPVSIAVGGGPPQSSVVQNHSTGPQPV
160 170 180 190 200 210
760 770 780 790 800 810
pF1KE0 TVVNSQTLLHHPSVIPQQSPLHTVVPGQIPSGTPVTVIQQAVPQSHMFGRVQNIPACTST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TVVNSQTLLHHPSVIPQQSPLHTVVPGQIPSGTPVTVIQQAVPQSHMFGRVQNIPACTST
220 230 240 250 260 270
820 830 840 850 860 870
pF1KE0 VSQGQQLITTSPQPVQTSSQQTSAGSQSQDTVIIAPPQYVTTSASNIVSATSVQNFQVAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VSQGQQLITTSPQPVQTSSQQTSAGSQSQDTVIIAPPQYVTTSASNIVSATSVQNFQVAT
280 290 300 310 320 330
880 890 900 910 920 930
pF1KE0 GQMVTIAGVPSPQASRVGFQNIAPKPLPSQQVSSTVVQQPIQQPQQPTQQSVVIVSQPAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GQMVTIAGVPSPQASRVGFQNIAPKPLPSQQVSSTVVQQPIQQPQQPTQQSVVIVSQPAQ
340 350 360 370 380 390
940 950 960 970 980 990
pF1KE0 QGQTYAPAIHQIVLANPAALPAGQTVQLTGQPNITPSSSPSPVPATNNQVPTAMSSSSTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QGQTYAPAIHQIVLANPAALPAGQTVQLTGQPNITPSSSPSPVPATNNQVPTAMSSSSTP
400 410 420 430 440 450
1000 1010 1020 1030 1040 1050
pF1KE0 QSQGPPPTVSQMLSVKRQQQQQHSPAPPPQQVQVQVQQPQQVQMQVQPQQSNAGVGQPAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QSQGPPPTVSQMLSVKRQQQQQHSPAPPPQQVQVQVQQPQQVQMQVQPQQSNAGVGQPAS
460 470 480 490 500 510
1060 1070 1080 1090 1100 1110
pF1KE0 GESSLIKQLLLPKRGPSTPGGKLILPAPQIPPPNNARAPSPQVVYQVASNQAAGFGVQGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GESSLIKQLLLPKRGPSTPGGKLILPAPQIPPPNNARAPSPQVVYQVASNQAAGFGVQGQ
520 530 540 550 560 570
1120 1130 1140 1150 1160 1170
pF1KE0 TPAQQLLVGQQNVQLVPSAMPPSGGVQTVPISNLQILPGPLISNSPATIFQGTSGNQVTI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TPAQQLLVGQQNVQLVPSAMPPSGGVQTVPISNLQILPGPLISNSPATIFQGTSGNQVTI
580 590 600 610 620 630
1180 1190 1200 1210 1220 1230
pF1KE0 TVVPNTSFAPATVSQGNATQLIAPAGITMSGTQTGVGLPVQTLPATQASPAGQSSCTTAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TVVPNTSFAPATVSQGNATQLIAPAGITMSGTQTGVGLPVQTLPATQASPAGQSSCTTAT
640 650 660 670 680 690
1240 1250 1260 1270 1280 1290
pF1KE0 PPFKGDKIICQKEEEAKEATGLHVHERKIEVMENPSCRRGATNTSNGDTKENEMHVGSLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PPFKGDKIICQKEEEAKEATGLHVHERKIEVMENPSCRRGATNTSNGDTKENEMHVGSLL
700 710 720 730 740 750
1300 1310 1320 1330 1340 1350
pF1KE0 NGRKYSDSSLPPSNSGKIQSETNQCSLISNGPSLELGENGASGKQNSEQIDMQDIKSDLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NGRKYSDSSLPPSNSGKIQSETNQCSLISNGPSLELGENGASGKQNSEQIDMQDIKSDLR
760 770 780 790 800 810
1360 1370 1380 1390 1400 1410
pF1KE0 KPLVNGICDFDKGDGSHLSKNIPNHKTSNHVGNGEISPMEPQGTLDITQQDTAKGDQLER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KPLVNGICDFDKGDGSHLSKNIPNHKTSNHVGNGEISPMEPQGTLDITQQDTAKGDQLER
820 830 840 850 860 870
1420 1430 1440 1450 1460 1470
pF1KE0 ISNGPVLTLGGSSVSSIQEASNAATQQFSGTDLLNGPLASSLNSDVPQQRPSVVVSPHST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ISNGPVLTLGGSSVSSIQEASNAATQQFSGTDLLNGPLASSLNSDVPQQRPSVVVSPHST
880 890 900 910 920 930
1480 1490 1500 1510 1520 1530
pF1KE0 TSVIQGHQIIAVPDSGSKVSHSPALSSDVRSTNGTAECKTVKRPAEDTDRETVAGIPNKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TSVIQGHQIIAVPDSGSKVSHSPALSSDVRSTNGTAECKTVKRPAEDTDRETVAGIPNKV
940 950 960 970 980 990
1540 1550 1560 1570 1580 1590
pF1KE0 GVRIVTISDPNNAGCSATMVAVPAGADPSTVAKVAIESAVQQKQQHPPTYVQNVVPQNTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GVRIVTISDPNNAGCSATMVAVPAGADPSTVAKVAIESAVQQKQQHPPTYVQNVVPQNTP
1000 1010 1020 1030 1040 1050
1600 1610 1620 1630 1640 1650
pF1KE0 MPPSPAVQVQGQPNSSQPSPFSGSSQPGDPMRKPGQNFMCLWQSCKKWFQTPSQVFYHAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MPPSPAVQVQGQPNSSQPSPFSGSSQPGDPMRKPGQNFMCLWQSCKKWFQTPSQVFYHAA
1060 1070 1080 1090 1100 1110
1660 1670 1680 1690 1700 1710
pF1KE0 TEHGGKDVYPGQCLWEGCEPFQRQRFSFITHLQDKHCSKDALLAGLKQDEPGQAGSQKSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TEHGGKDVYPGQCLWEGCEPFQRQRFSFITHLQDKHCSKDALLAGLKQDEPGQAGSQKSS
1120 1130 1140 1150 1160 1170
1720 1730 1740 1750 1760 1770
pF1KE0 TKQPTVGGTSSTPRAQKAIVNHPSAALMALRRGSRNLVFRDFTDEKEGPITKHIRLTAAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TKQPTVGGTSSTPRAQKAIVNHPSAALMALRRGSRNLVFRDFTDEKEGPITKHIRLTAAL
1180 1190 1200 1210 1220 1230
1780 1790 1800 1810 1820 1830
pF1KE0 ILKNIGKYSECGRRLLKRHENNLSVLAISNMEASSTLAKCLYELNFTVQSKEQEKDSEML
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ILKNIGKYSECGRRLLKRHENNLSVLAISNMEASSTLAKCLYELNFTVQSKEQEKDSEML
1240 1250 1260 1270 1280 1290
pF1KE0 Q
:
XP_011 Q
1835 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 03:24:53 2016 done: Fri Nov 4 03:24:56 2016
Total Scan time: 21.720 Total Display time: 0.300
Function used was FASTA [36.3.4 Apr, 2011]