Result of FASTA (ccds) for
pFN21AE0061
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0061, 937 aa
1>>>pF1KE0061 937 - 937 aa - 937 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.2450+/- 0.001; mu= 13.3080+/- 0.060
mean_var=143.5735+/-28.408, 0's: 0 Z-trim(108.8): 192 B-trim: 105 in 2/50
Lambda= 0.107038
statistics sampled from 10284 (10478) to 10284 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.665), E-opt: 0.2 (0.322), width: 16
Scan time: 4.970
The best scores are: opt bits E(32554)
CCDS54918.1 PCDHA7 gene_id:56141|Hs108|chr5 ( 937) 6164 964.4 0
CCDS54917.1 PCDHA5 gene_id:56143|Hs108|chr5 ( 936) 5007 785.7 0
CCDS47285.1 PCDHA12 gene_id:56137|Hs108|chr5 ( 941) 4884 766.7 0
CCDS54920.1 PCDHA9 gene_id:9752|Hs108|chr5 ( 950) 4505 708.2 1.9e-203
CCDS54916.1 PCDHA4 gene_id:56144|Hs108|chr5 ( 947) 4239 667.1 4.4e-191
CCDS54915.1 PCDHA3 gene_id:56145|Hs108|chr5 ( 950) 4100 645.6 1.3e-184
CCDS4240.1 PCDHA13 gene_id:56136|Hs108|chr5 ( 950) 4015 632.5 1.1e-180
CCDS54913.1 PCDHA1 gene_id:56147|Hs108|chr5 ( 950) 3991 628.8 1.5e-179
CCDS47281.1 PCDHA6 gene_id:56142|Hs108|chr5 ( 950) 3989 628.5 1.8e-179
CCDS54919.1 PCDHA8 gene_id:56140|Hs108|chr5 ( 950) 3956 623.4 6.3e-178
CCDS54914.1 PCDHA2 gene_id:56146|Hs108|chr5 ( 948) 3939 620.8 3.9e-177
CCDS47284.1 PCDHA11 gene_id:56138|Hs108|chr5 ( 949) 3929 619.2 1.1e-176
CCDS64269.1 PCDHA2 gene_id:56146|Hs108|chr5 ( 808) 3927 618.9 1.2e-176
CCDS54921.1 PCDHA10 gene_id:56139|Hs108|chr5 ( 948) 3911 616.5 7.8e-176
CCDS75326.1 PCDHA11 gene_id:56138|Hs108|chr5 ( 810) 3909 616.1 8.5e-176
CCDS75325.1 PCDHA10 gene_id:56139|Hs108|chr5 ( 844) 3901 614.9 2.1e-175
CCDS75327.1 PCDHA12 gene_id:56137|Hs108|chr5 ( 792) 3867 609.6 7.5e-174
CCDS54912.1 PCDHA1 gene_id:56147|Hs108|chr5 ( 686) 2584 411.4 2.9e-114
CCDS34255.1 PCDHA10 gene_id:56139|Hs108|chr5 ( 685) 2564 408.3 2.5e-113
CCDS47282.1 PCDHA6 gene_id:56142|Hs108|chr5 ( 686) 2546 405.6 1.7e-112
CCDS75348.1 PCDHGC3 gene_id:5098|Hs108|chr5 ( 863) 2006 322.2 2.6e-87
CCDS4261.1 PCDHGC3 gene_id:5098|Hs108|chr5 ( 934) 2006 322.3 2.8e-87
CCDS75336.1 PCDHGA7 gene_id:56108|Hs108|chr5 ( 817) 1957 314.7 4.7e-85
CCDS54927.1 PCDHGA7 gene_id:56108|Hs108|chr5 ( 932) 1957 314.7 5.2e-85
CCDS75350.1 PCDHGC5 gene_id:56097|Hs108|chr5 ( 878) 1947 313.1 1.5e-84
CCDS4263.1 PCDHGC5 gene_id:56097|Hs108|chr5 ( 944) 1947 313.2 1.5e-84
CCDS75330.1 PCDHGB1 gene_id:56104|Hs108|chr5 ( 810) 1936 311.4 4.4e-84
CCDS54923.1 PCDHGB1 gene_id:56104|Hs108|chr5 ( 927) 1936 311.5 4.9e-84
CCDS47289.1 PCDHGA2 gene_id:56113|Hs108|chr5 ( 932) 1927 310.1 1.3e-83
CCDS75346.1 PCDHGA12 gene_id:26025|Hs108|chr5 ( 820) 1919 308.8 2.8e-83
CCDS75343.1 PCDHGA10 gene_id:56106|Hs108|chr5 ( 850) 1919 308.8 2.8e-83
CCDS4260.1 PCDHGA12 gene_id:26025|Hs108|chr5 ( 932) 1919 308.8 3.1e-83
CCDS47292.1 PCDHGA10 gene_id:56106|Hs108|chr5 ( 936) 1919 308.8 3.1e-83
CCDS75331.1 PCDHGA4 gene_id:56111|Hs108|chr5 ( 851) 1894 304.9 4.1e-82
CCDS58979.2 PCDHGA4 gene_id:56111|Hs108|chr5 ( 962) 1894 305.0 4.5e-82
CCDS4257.1 PCDHB15 gene_id:56121|Hs108|chr5 ( 787) 1892 304.6 4.8e-82
CCDS54924.1 PCDHGB2 gene_id:56103|Hs108|chr5 ( 931) 1889 304.2 7.6e-82
CCDS75334.1 PCDHGB3 gene_id:56102|Hs108|chr5 ( 814) 1884 303.4 1.2e-81
CCDS58980.1 PCDHGB3 gene_id:56102|Hs108|chr5 ( 929) 1884 303.4 1.3e-81
CCDS75335.1 PCDHGA6 gene_id:56109|Hs108|chr5 ( 818) 1882 303.1 1.4e-81
CCDS54926.1 PCDHGA6 gene_id:56109|Hs108|chr5 ( 932) 1882 303.1 1.6e-81
CCDS75345.1 PCDHGA11 gene_id:56105|Hs108|chr5 ( 837) 1881 302.9 1.6e-81
CCDS47294.1 PCDHGA11 gene_id:56105|Hs108|chr5 ( 935) 1881 303.0 1.8e-81
CCDS75338.1 PCDHGA8 gene_id:9708|Hs108|chr5 ( 820) 1877 302.3 2.5e-81
CCDS47291.1 PCDHGA8 gene_id:9708|Hs108|chr5 ( 932) 1877 302.4 2.7e-81
CCDS75332.1 PCDHGB2 gene_id:56103|Hs108|chr5 ( 811) 1874 301.8 3.4e-81
CCDS58981.1 PCDHGA9 gene_id:56107|Hs108|chr5 ( 932) 1873 301.7 4.2e-81
CCDS75341.1 PCDHGA9 gene_id:56107|Hs108|chr5 ( 828) 1867 300.8 7.3e-81
CCDS75333.1 PCDHGA5 gene_id:56110|Hs108|chr5 ( 813) 1866 300.6 8e-81
CCDS54925.1 PCDHGA5 gene_id:56110|Hs108|chr5 ( 931) 1866 300.7 8.9e-81
>>CCDS54918.1 PCDHA7 gene_id:56141|Hs108|chr5 (937 aa)
initn: 6164 init1: 6164 opt: 6164 Z-score: 5150.6 bits: 964.4 E(32554): 0
Smith-Waterman score: 6164; 100.0% identity (100.0% similar) in 937 aa overlap (1-937:1-937)
10 20 30 40 50 60
pF1KE0 MVCPNGYDPGGRHLLLFIIILAAWEAGRGQLHYSVPEEAKHGNFVGRIAQDLGLELAELV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 MVCPNGYDPGGRHLLLFIIILAAWEAGRGQLHYSVPEEAKHGNFVGRIAQDLGLELAELV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 PRLFRAVCKFRGDLLEVNLQNGILFVNSRIDREELCGRSAECSIHLEVIVERPLQVFHVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 PRLFRAVCKFRGDLLEVNLQNGILFVNSRIDREELCGRSAECSIHLEVIVERPLQVFHVD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 VEVKDINDNPPVFPATQRNLFIAESRPLDSRFPLEGASDADIGENALLTYRLSPNEYFFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 VEVKDINDNPPVFPATQRNLFIAESRPLDSRFPLEGASDADIGENALLTYRLSPNEYFFL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 DVPTSNQQVKPLGLVLRKLLDREETPELHLLLTATDGGKPELTGTVQLLITVLDNNDNAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 DVPTSNQQVKPLGLVLRKLLDREETPELHLLLTATDGGKPELTGTVQLLITVLDNNDNAP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 VFDRTLYTVKLPENVSIGTLVIHPNASDLDEGLNGDIIYSFSSDVSPDIKSKFHMDPLSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 VFDRTLYTVKLPENVSIGTLVIHPNASDLDEGLNGDIIYSFSSDVSPDIKSKFHMDPLSG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE0 AITVIGHMDFEESRAHKIPVEAVDKGFPPLAGHCTVLVEVVDVNDNAPQLTLTSLSLPIP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 AITVIGHMDFEESRAHKIPVEAVDKGFPPLAGHCTVLVEVVDVNDNAPQLTLTSLSLPIP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE0 EDAQPGTVITLISVFDRDFGVNGQVTCSLTPRVPFKLVSTFKNYYSLVLDSALDRESVSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 EDAQPGTVITLISVFDRDFGVNGQVTCSLTPRVPFKLVSTFKNYYSLVLDSALDRESVSA
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE0 YELVVTARDGGSPSLWATASVSVEVADVNDNAPAFAQPEYTVFVKENNPPGCHIFTVSAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 YELVVTARDGGSPSLWATASVSVEVADVNDNAPAFAQPEYTVFVKENNPPGCHIFTVSAG
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE0 DADAQKNALVSYSLVELRVGERALSSYVSVHAESGKVYALQPLDHEELELLQFQVSARDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 DADAQKNALVSYSLVELRVGERALSSYVSVHAESGKVYALQPLDHEELELLQFQVSARDA
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE0 GVPPLGSNVTLQVFVLDENDNAPALLAPRVGGTGGAVRELVPRSVGAGHVVAKVRAVDAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 GVPPLGSNVTLQVFVLDENDNAPALLAPRVGGTGGAVRELVPRSVGAGHVVAKVRAVDAD
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE0 SGYNAWLSYELQPVAAGASIPFRVGLYTGEISTTRALDETDAPRHRLLVLVKDHGEPSLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 SGYNAWLSYELQPVAAGASIPFRVGLYTGEISTTRALDETDAPRHRLLVLVKDHGEPSLT
610 620 630 640 650 660
670 680 690 700 710 720
pF1KE0 ATATVLVSLVESGQAPKASSRASLGIAGPETELVDVNVYLIIAICAVSSLLVLTLLLYTA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 ATATVLVSLVESGQAPKASSRASLGIAGPETELVDVNVYLIIAICAVSSLLVLTLLLYTA
670 680 690 700 710 720
730 740 750 760 770 780
pF1KE0 LRCSAPSSEGACSLVKPTLVCSSAVGSWSFSQQRRQRVCSGEGPPKTDLMAFSPSLPQGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 LRCSAPSSEGACSLVKPTLVCSSAVGSWSFSQQRRQRVCSGEGPPKTDLMAFSPSLPQGP
730 740 750 760 770 780
790 800 810 820 830 840
pF1KE0 SSTDNPRQPNPDWRYSASLRAGMHSSVHLEEAGILRAGPGGPDQQWPTVSSATPEPEAGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 SSTDNPRQPNPDWRYSASLRAGMHSSVHLEEAGILRAGPGGPDQQWPTVSSATPEPEAGE
790 800 810 820 830 840
850 860 870 880 890 900
pF1KE0 VSPPVGAGVNSNSWTFKYGPGNPKQSGPGELPDKFIIPGSPAIISIRQEPTNSQIDKSDF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 VSPPVGAGVNSNSWTFKYGPGNPKQSGPGELPDKFIIPGSPAIISIRQEPTNSQIDKSDF
850 860 870 880 890 900
910 920 930
pF1KE0 ITFGKKEETKKKKKKKKGNKTQEKKEKGNSTTDNSDQ
:::::::::::::::::::::::::::::::::::::
CCDS54 ITFGKKEETKKKKKKKKGNKTQEKKEKGNSTTDNSDQ
910 920 930
>>CCDS54917.1 PCDHA5 gene_id:56143|Hs108|chr5 (936 aa)
initn: 5007 init1: 5007 opt: 5007 Z-score: 4185.1 bits: 785.7 E(32554): 0
Smith-Waterman score: 5007; 82.7% identity (91.9% similar) in 927 aa overlap (11-937:10-936)
10 20 30 40 50 60
pF1KE0 MVCPNGYDPGGRHLLLFIIILAAWEAGRGQLHYSVPEEAKHGNFVGRIAQDLGLELAELV
: .:::. ..:: :.:: ::::::.:::::::.:::::::::::::::::
CCDS54 MVYSRRGSLGSRLLLLWLLLAYWKAGSGQLHYSIPEEAKHGTFVGRIAQDLGLELAELV
10 20 30 40 50
70 80 90 100 110 120
pF1KE0 PRLFRAVCKFRGDLLEVNLQNGILFVNSRIDREELCGRSAECSIHLEVIVERPLQVFHVD
:::::.. : :::::::::::::::::::::::::: : :::::::::::.::::::::.
CCDS54 PRLFRVASKGRGDLLEVNLQNGILFVNSRIDREELCRRRAECSIHLEVIVDRPLQVFHVE
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE0 VEVKDINDNPPVFPATQRNLFIAESRPLDSRFPLEGASDADIGENALLTYRLSPNEYFFL
: ::::::::: : .. ::: ::: ::::::::::: ::: :: : :::.::::: :
CCDS54 VAVKDINDNPPRFSRQEQRLFILESRMPDSRFPLEGASDLDIGANAQLRYRLNPNEYFDL
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE0 DVPTSNQQVKPLGLVLRKLLDREETPELHLLLTATDGGKPELTGTVQLLITVLDNNDNAP
:: :...... : ::::: :::::: : .::. :::::::::::::::::.::: :::::
CCDS54 DVKTNEEETNFLELVLRKSLDREETQEHRLLVIATDGGKPELTGTVQLLINVLDANDNAP
180 190 200 210 220 230
250 260 270 280 290 300
pF1KE0 VFDRTLYTVKLPENVSIGTLVIHPNASDLDEGLNGDIIYSFSSDVSPDIKSKFHMDPLSG
::...:.:.: ::. :::::. :::: :::.: .:.: ::. : :.:::: .. .:
CCDS54 EFDKSIYNVRLLENAPSGTLVIKLNASDADEGINKEIVYFFSNLVLDDVKSKFIINSNTG
240 250 260 270 280 290
310 320 330 340 350 360
pF1KE0 AITVIGHMDFEESRAHKIPVEAVDKGFPPLAGHCTVLVEVVDVNDNAPQLTLTSLSLPIP
: : :..:.:. ...: ..:.::. ::.::: :.:...:::::.:....:.: ::.
CCDS54 EIKVNGELDYEDYNSYEINIDAMDKSTFPLSGHCKVVVKLLDVNDNTPEMAITTLFLPVK
300 310 320 330 340 350
370 380 390 400 410 420
pF1KE0 EDAQPGTVITLISVFDRDFGVNGQVTCSLTPRVPFKLVSTFKNYYSLVLDSALDRESVSA
::: .:::.:::: ::: :.:::::::: :.:::::::::::::::::::::::::::.
CCDS54 EDAPLSTVIALISVSDRDSGANGQVTCSLMPHVPFKLVSTFKNYYSLVLDSALDRESVSV
360 370 380 390 400 410
430 440 450 460 470 480
pF1KE0 YELVVTARDGGSPSLWATASVSVEVADVNDNAPAFAQPEYTVFVKENNPPGCHIFTVSAG
::::::::::::::::::::::::::::::::::::::.::::::::::::::::::::
CCDS54 YELVVTARDGGSPSLWATASVSVEVADVNDNAPAFAQPQYTVFVKENNPPGCHIFTVSAR
420 430 440 450 460 470
490 500 510 520 530 540
pF1KE0 DADAQKNALVSYSLVELRVGERALSSYVSVHAESGKVYALQPLDHEELELLQFQVSARDA
:::::.:::::::::: ::::: ::::::::::::::::::::::::.::::::::::::
CCDS54 DADAQENALVSYSLVERRVGERPLSSYVSVHAESGKVYALQPLDHEEVELLQFQVSARDA
480 490 500 510 520 530
550 560 570 580 590 600
pF1KE0 GVPPLGSNVTLQVFVLDENDNAPALLAPRVGGTGGAVRELVPRSVGAGHVVAKVRAVDAD
::::::::::::::::::::::::::.:::::::::: :::::::::::::::::::: :
CCDS54 GVPPLGSNVTLQVFVLDENDNAPALLVPRVGGTGGAVSELVPRSVGAGHVVAKVRAVDPD
540 550 560 570 580 590
610 620 630 640 650 660
pF1KE0 SGYNAWLSYELQPVAAGASIPFRVGLYTGEISTTRALDETDAPRHRLLVLVKDHGEPSLT
:::::::::::::. ..: ::::::::::::::::.::::.:::::::::::::::: ::
CCDS54 SGYNAWLSYELQPAPGSARIPFRVGLYTGEISTTRSLDETEAPRHRLLVLVKDHGEPPLT
600 610 620 630 640 650
670 680 690 700 710 720
pF1KE0 ATATVLVSLVESGQAPKASSRASLGIAGPETELVDVNVYLIIAICAVSSLLVLTLLLYTA
::::::::::::::::::::::: : .:::. ::::::::::::::::::::::::::::
CCDS54 ATATVLVSLVESGQAPKASSRASAGAVGPEAALVDVNVYLIIAICAVSSLLVLTLLLYTA
660 670 680 690 700 710
730 740 750 760 770 780
pF1KE0 LRCSAPSSEGACSLVKPTLVCSSAVGSWSFSQQRRQRVCSGEGPPKTDLMAFSPSLPQGP
::::: .:..:. ::::.:::::::::.::::::::::::.:::::::::::::::::
CCDS54 LRCSAQPTEAVCTRGKPTLLCSSAVGSWSYSQQRRQRVCSGEAPPKTDLMAFSPSLPQGP
720 730 740 750 760 770
790 800 810 820 830 840
pF1KE0 SSTDNPRQPNPDWRYSASLRAGMHSSVHLEEAGILRAGPGGPDQQWPTVSSATPEPEAGE
.:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 TSTDNPRQPNPDWRYSASLRAGMHSSVHLEEAGILRAGPGGPDQQWPTVSSATPEPEAGE
780 790 800 810 820 830
850 860 870 880 890 900
pF1KE0 VSPPVGAGVNSNSWTFKYGPGNPKQSGPGELPDKFIIPGSPAIISIRQEPTNSQIDKSDF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 VSPPVGAGVNSNSWTFKYGPGNPKQSGPGELPDKFIIPGSPAIISIRQEPTNSQIDKSDF
840 850 860 870 880 890
910 920 930
pF1KE0 ITFGKKEETKKKKKKKKGNKTQEKKEKGNSTTDNSDQ
:::::::::::::::::::::::::::::::::::::
CCDS54 ITFGKKEETKKKKKKKKGNKTQEKKEKGNSTTDNSDQ
900 910 920 930
>>CCDS47285.1 PCDHA12 gene_id:56137|Hs108|chr5 (941 aa)
initn: 3862 init1: 3862 opt: 4884 Z-score: 4082.4 bits: 766.7 E(32554): 0
Smith-Waterman score: 4884; 80.7% identity (90.6% similar) in 942 aa overlap (1-937:3-941)
10 20 30 40 50
pF1KE0 MVCPNGYDPGGRHLLLFIIILAAWEAGRGQLHYSVPEEAKHGNFVGRIAQDLGLELAE
.. : : ::...::: ...:::::.: ::::::: ::::::.:::::::::::::::
CCDS47 MVIIGPRG--PGSQRLLLSLLLLAAWEVGSGQLHYSVYEEAKHGTFVGRIAQDLGLELAE
10 20 30 40 50
60 70 80 90 100 110
pF1KE0 LVPRLFRAVCKFRGDLLEVNLQNGILFVNSRIDREELCGRSAECSIHLEVIVERPLQVFH
:::::::.. : .::::::::::::::::::::::.::::::::::::::::.:::::::
CCDS47 LVPRLFRVASKRHGDLLEVNLQNGILFVNSRIDREKLCGRSAECSIHLEVIVDRPLQVFH
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE0 VDVEVKDINDNPPVFPATQRNLFIAESRPLDSRFPLEGASDADIGENALLTYRLSPNEYF
::::::::::::::: .... ..:: ::::.:::::::::::: :.:::: :: :: :
CCDS47 VDVEVKDINDNPPVFREREQKVPVSESAPLDSHFPLEGASDADIGVNSLLTYALSLNENF
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE0 FLDVPTS-NQQVKPLGLVLRKLLDREETPELHLLLTATDGGKPELTGTVQLLITVLDNND
: . :. .... : ::::::::::.::.:.::: . :::::::::.::. ::::: ::
CCDS47 ELKIKTKKDKSILPE-LVLRKLLDREQTPKLNLLLMVIDGGKPELTGSVQIQITVLDVND
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE0 NAPVFDRTLYTVKLPENVSIGTLVIHPNASDLDEGLNGDIIYSFSSDVSPDIKSKFHMDP
:.:.::. : : : :::. : ::. :::: ::::::.: :... . . : : ..:
CCDS47 NGPAFDKPSYKVVLSENVQNDTRVIQLNASDPDEGLNGEISYGIKMILPVSEKCMFSINP
240 250 260 270 280 290
300 310 320 330 340 350
pF1KE0 LSGAITVIGHMDFEESRAHKIPVEAVDKGFPPLAGHCTVLVEVVDVNDNAPQLTLTSLSL
.: : . :..::::. :..: :.:.:::.: .::: :::::.:::::.:.. .:::::
CCDS47 DTGEIRIYGELDFEENNAYEIQVNAIDKGIPSMAGHSMVLVEVLDVNDNVPEVMVTSLSL
300 310 320 330 340 350
360 370 380 390 400 410
pF1KE0 PIPEDAQPGTVITLISVFDRDFGVNGQVTCSLTPRVPFKLVSTFKNYYSLVLDSALDRES
:. :::: ::::.:::: ::: :.:::: :::::.::::::::.::::::::::::::::
CCDS47 PVQEDAQVGTVIALISVSDRDSGANGQVICSLTPHVPFKLVSTYKNYYSLVLDSALDRES
360 370 380 390 400 410
420 430 440 450 460 470
pF1KE0 VSAYELVVTARDGGSPSLWATASVSVEVADVNDNAPAFAQPEYTVFVKENNPPGCHIFTV
:::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::
CCDS47 VSAYELVVTARDGGSPSLWATARVSVEVADVNDNAPAFAQPEYTVFVKENNPPGCHIFTV
420 430 440 450 460 470
480 490 500 510 520 530
pF1KE0 SAGDADAQKNALVSYSLVELRVGERALSSYVSVHAESGKVYALQPLDHEELELLQFQVSA
:: :::::::::::::::: ::::.:::::::::::::::::::::::::::::::::::
CCDS47 SAWDADAQKNALVSYSLVERRVGEHALSSYVSVHAESGKVYALQPLDHEELELLQFQVSA
480 490 500 510 520 530
540 550 560 570 580 590
pF1KE0 RDAGVPPLGSNVTLQVFVLDENDNAPALLAPRVGGTGGAVRELVPRSVGAGHVVAKVRAV
:::::::::::::::::::::::::::::: .:..:::: :::::::::::::::::::
CCDS47 RDAGVPPLGSNVTLQVFVLDENDNAPALLATPAGSAGGAVSELVPRSVGAGHVVAKVRAV
540 550 560 570 580 590
600 610 620 630 640 650
pF1KE0 DADSGYNAWLSYELQPVAAGASIPFRVGLYTGEISTTRALDETDAPRHRLLVLVKDHGEP
::::::::::::::::.:.:: :::.:::::::::::: :::.:::::::::::::::::
CCDS47 DADSGYNAWLSYELQPAAVGAHIPFHVGLYTGEISTTRILDEADAPRHRLLVLVKDHGEP
600 610 620 630 640 650
660 670 680 690 700 710
pF1KE0 SLTATATVLVSLVESGQAPKASSRASLGIAGPETELVDVNVYLIIAICAVSSLLVLTLLL
.::.::::::::::.:::::.:::::.: . ::. :::.:::::::::::::::::::::
CCDS47 ALTSTATVLVSLVENGQAPKTSSRASVGAVDPEAALVDINVYLIIAICAVSSLLVLTLLL
660 670 680 690 700 710
720 730 740 750 760 770
pF1KE0 YTALRCSAPSSEGACSLVKPTLVCSSAVGSWSFSQQRRQRVCSGEGPPKTDLMAFSPSLP
::::::::: . . :. ::::::::::::::.::::::::::.:.:::::::::::::
CCDS47 YTALRCSAPPTVSRCAPGKPTLVCSSAVGSWSYSQQRRQRVCSAESPPKTDLMAFSPSLQ
720 730 740 750 760 770
780 790 800 810 820 830
pF1KE0 QGPSSTDNP----RQPNPDWRYSASLRAGMHSSVHLEEAGILRAGPGGPDQQWPTVSSAT
. . :: :::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 LSREDCLNPPSEPRQPNPDWRYSASLRAGMHSSVHLEEAGILRAGPGGPDQQWPTVSSAT
780 790 800 810 820 830
840 850 860 870 880 890
pF1KE0 PEPEAGEVSPPVGAGVNSNSWTFKYGPGNPKQSGPGELPDKFIIPGSPAIISIRQEPTNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 PEPEAGEVSPPVGAGVNSNSWTFKYGPGNPKQSGPGELPDKFIIPGSPAIISIRQEPTNS
840 850 860 870 880 890
900 910 920 930
pF1KE0 QIDKSDFITFGKKEETKKKKKKKKGNKTQEKKEKGNSTTDNSDQ
::::::::::::::::::::::::::::::::::::::::::::
CCDS47 QIDKSDFITFGKKEETKKKKKKKKGNKTQEKKEKGNSTTDNSDQ
900 910 920 930 940
>>CCDS54920.1 PCDHA9 gene_id:9752|Hs108|chr5 (950 aa)
initn: 4485 init1: 4485 opt: 4505 Z-score: 3766.0 bits: 708.2 E(32554): 1.9e-203
Smith-Waterman score: 5493; 90.1% identity (94.6% similar) in 943 aa overlap (8-937:8-950)
10 20 30 40 50 60
pF1KE0 MVCPNGYDPGGRHLLLFIIILAAWEAGRGQLHYSVPEEAKHGNFVGRIAQDLGLELAELV
:: :. ::: ..::: : .: :::::::::::.::.:::::::::::::::::
CCDS54 MLYSSRGDPEGQPLLLSLLILAMWVVGSGQLHYSVPEEAEHGTFVGRIAQDLGLELAELV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 PRLFRAVCKFRGDLLEVNLQNGILFVNSRIDREELCGRSAECSIHLEVIVERPLQVFHVD
::::. : ::::::::::::::::::::::::::::::::::::::::.:::::::::
CCDS54 PRLFQLDSKGRGDLLEVNLQNGILFVNSRIDREELCGRSAECSIHLEVIVDRPLQVFHVD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 VEVKDINDNPPVFPATQRNLFIAESRPLDSRFPLEGASDADIGENALLTYRLSPNEYFFL
:::::::::::::::::.::::::::::::::::::::::::::::::::::::::::::
CCDS54 VEVKDINDNPPVFPATQKNLFIAESRPLDSRFPLEGASDADIGENALLTYRLSPNEYFFL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 DVPTSNQQVKPLGLVLRKLLDREETPELHLLLTATDGGKPELTGTVQLLITVLDNNDNAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 DVPTSNQQVKPLGLVLRKLLDREETPELHLLLTATDGGKPELTGTVQLLITVLDNNDNAP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 VFDRTLYTVKLPENVSIGTLVIHPNASDLDEGLNGDIIYSFSSDVSPDIKSKFHMDPLSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 VFDRTLYTVKLPENVSIGTLVIHPNASDLDEGLNGDIIYSFSSDVSPDIKSKFHMDPLSG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE0 AITVIGHMDFEESRAHKIPVEAVDKGFPPLAGHCTVLVEVVDVNDNAPQLTLTSLSLPIP
:::::::::::::::::::::::::::::::::::.:::::::::::::::. .::.:.
CCDS54 AITVIGHMDFEESRAHKIPVEAVDKGFPPLAGHCTLLVEVVDVNDNAPQLTIKTLSVPVK
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE0 EDAQPGTVITLISVFDRDFGVNGQVTCSLTPRVPFKLVSTFKNYYSLVLDSALDRESVSA
:::: ::::.::::.: : .::::::::::.::::::::.::::::::: :::::::::
CCDS54 EDAQLGTVIALISVIDLDADANGQVTCSLTPHVPFKLVSTYKNYYSLVLDRALDRESVSA
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE0 YELVVTARDGGSPSLWATASVSVEVADVNDNAPAFAQPEYTVFVKENNPPGCHIFTVSAG
::::::::::::::::::: ::::::::::::::::: :::::::::::::::::::::
CCDS54 YELVVTARDGGSPSLWATARVSVEVADVNDNAPAFAQSEYTVFVKENNPPGCHIFTVSAR
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE0 DADAQKNALVSYSLVELRVGERALSSYVSVHAESGKVYALQPLDHEELELLQFQVSARDA
:::::.:::::::::: :.:::.:::::::::::::::::::::::::::::::::::::
CCDS54 DADAQENALVSYSLVERRLGERSLSSYVSVHAESGKVYALQPLDHEELELLQFQVSARDA
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE0 GVPPLGSNVTLQVFVLDENDNAPALLAPRVGGTGGAVRELVPRSVGAGHVVAKVRAVDAD
::::::::::::::::::::::::::.::. :: ::: :.: :::::: ::.::::::::
CCDS54 GVPPLGSNVTLQVFVLDENDNAPALLTPRMRGTDGAVSEMVLRSVGAGVVVGKVRAVDAD
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE0 SGYNAWLSYELQPVAAGASIPFRVGLYTGEISTTRALDETDAPRHRLLVLVKDHGEPSLT
::::::::::::: .:.:::::::::::::::::::::::::::.::::::::::::.::
CCDS54 SGYNAWLSYELQPETASASIPFRVGLYTGEISTTRALDETDAPRQRLLVLVKDHGEPALT
610 620 630 640 650 660
670 680 690 700 710 720
pF1KE0 ATATVLVSLVESGQAPKASSRASLGIAGPETELVDVNVYLIIAICAVSSLLVLTLLLYTA
:::::::::::::::::.:::::.: .:::. :::::::::::::::::::::::::::.
CCDS54 ATATVLVSLVESGQAPKSSSRASVGATGPEVTLVDVNVYLIIAICAVSSLLVLTLLLYTV
670 680 690 700 710 720
730 740 750 760 770
pF1KE0 LRCSAPSSEGACSLVKPTLVCSSAVGSWSFSQQRRQRVCSGEGPPKTDLMAFSPSL----
::::: .:: :. ::::::::::::::.::::::::::::: :::::::::.:
CCDS54 LRCSAMPTEGECAPGKPTLVCSSAVGSWSYSQQRRQRVCSGEGKQKTDLMAFSPGLSPCA
730 740 750 760 770 780
780 790 800 810 820
pF1KE0 --------PQGPS-STDNPRQPNPDWRYSASLRAGMHSSVHLEEAGILRAGPGGPDQQWP
:.. : :: .::::::::::::::::::::::::::::::::::::::::::
CCDS54 GSTERTGEPSASSDSTGKPRQPNPDWRYSASLRAGMHSSVHLEEAGILRAGPGGPDQQWP
790 800 810 820 830 840
830 840 850 860 870 880
pF1KE0 TVSSATPEPEAGEVSPPVGAGVNSNSWTFKYGPGNPKQSGPGELPDKFIIPGSPAIISIR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 TVSSATPEPEAGEVSPPVGAGVNSNSWTFKYGPGNPKQSGPGELPDKFIIPGSPAIISIR
850 860 870 880 890 900
890 900 910 920 930
pF1KE0 QEPTNSQIDKSDFITFGKKEETKKKKKKKKGNKTQEKKEKGNSTTDNSDQ
::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 QEPTNSQIDKSDFITFGKKEETKKKKKKKKGNKTQEKKEKGNSTTDNSDQ
910 920 930 940 950
>>CCDS54916.1 PCDHA4 gene_id:56144|Hs108|chr5 (947 aa)
initn: 4219 init1: 4219 opt: 4239 Z-score: 3544.0 bits: 667.1 E(32554): 4.4e-191
Smith-Waterman score: 5235; 85.7% identity (92.8% similar) in 942 aa overlap (6-937:6-947)
10 20 30 40 50 60
pF1KE0 MVCPNGYDPGGRHLLLFIIILAAWEAGRGQLHYSVPEEAKHGNFVGRIAQDLGLELAELV
: .:.:::....::::::: ::::::: ::::::.:::::::::::::::::
CCDS54 MEFSWGSGQESRRLLLLLLLLAAWEAGNGQLHYSVSEEAKHGTFVGRIAQDLGLELAELV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 PRLFRAVCKFRGDLLEVNLQNGILFVNSRIDREELCGRSAECSIHLEVIVERPLQVFHVD
:::::.. : :: ::::::::::::::::::::::: :::::::::::::.:::::::::
CCDS54 PRLFRVASKGRGGLLEVNLQNGILFVNSRIDREELCRRSAECSIHLEVIVDRPLQVFHVD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 VEVKDINDNPPVFPATQRNLFIAESRPLDSRFPLEGASDADIGENALLTYRLSPNEYFFL
:::.:::::::::::::.:: ::::::::::::::::::::::::::::::::::::: :
CCDS54 VEVRDINDNPPVFPATQKNLSIAESRPLDSRFPLEGASDADIGENALLTYRLSPNEYFSL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 DVPTSNQQVKPLGLVLRKLLDREETPELHLLLTATDGGKPELTGTVQLLITVLDNNDNAP
. : ... :: :::.::: :::::.::. :.::::::::::::::::::::::: :::::
CCDS54 EKPPDDELVKGLGLILRKSLDREEAPEIFLVLTATDGGKPELTGTVQLLITVLDANDNAP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 VFDRTLYTVKLPENVSIGTLVIHPNASDLDEGLNGDIIYSFSSDVSPDIKSKFHMDPLSG
.::::.: :.: ::: :::::. :::::::::::::.::::.:.::..:::::.::..:
CCDS54 AFDRTIYKVRLLENVPNGTLVIKLNASDLDEGLNGDIVYSFSNDISPNVKSKFHIDPITG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE0 AITVIGHMDFEESRAHKIPVEAVDKGFPPLAGHCTVLVEVVDVNDNAPQLTLTSLSLPIP
: : :..:::::....: ::..::: ::.::: :.::: : :::.:.: . ::::::
CCDS54 QIIVKGYIDFEESKSYEIIVEGIDKGQLPLSGHCRVIVEVEDNNDNVPDLEFKSLSLPIR
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE0 EDAQPGTVITLISVFDRDFGVNGQVTCSLTPRVPFKLVSTFKNYYSLVLDSALDRESVSA
::: ::::.:::: :.:.:::: :::::: .::::::::::::::::::::::::::::
CCDS54 EDAPLGTVIALISVSDKDMGVNGLVTCSLTSHVPFKLVSTFKNYYSLVLDSALDRESVSA
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE0 YELVVTARDGGSPSLWATASVSVEVADVNDNAPAFAQPEYTVFVKENNPPGCHIFTVSAG
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 YELVVTARDGGSPSLWATASVSVEVADVNDNAPAFAQPEYTVFVKENNPPGCHIFTVSAW
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE0 DADAQKNALVSYSLVELRVGERALSSYVSVHAESGKVYALQPLDHEELELLQFQVSARDA
:::::.:::::::::: ::::::::::::::::::::::::::::::::::::::.::::
CCDS54 DADAQENALVSYSLVERRVGERALSSYVSVHAESGKVYALQPLDHEELELLQFQVTARDA
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE0 GVPPLGSNVTLQVFVLDENDNAPALLAPRVGGTGGAVRELVPRSVGAGHVVAKVRAVDAD
:::::::::::::::::::::::::::::.::::::: :::: :::.:::::::::::::
CCDS54 GVPPLGSNVTLQVFVLDENDNAPALLAPRAGGTGGAVSELVPWSVGVGHVVAKVRAVDAD
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE0 SGYNAWLSYELQPVAAGASIPFRVGLYTGEISTTRALDETDAPRHRLLVLVKDHGEPSLT
::::::::::::: ..:: ::::::::::::::::::::::::::::::::::::::.::
CCDS54 SGYNAWLSYELQPGTGGARIPFRVGLYTGEISTTRALDETDAPRHRLLVLVKDHGEPALT
610 620 630 640 650 660
670 680 690 700 710 720
pF1KE0 ATATVLVSLVESGQAPKASSRASLGIAGPETELVDVNVYLIIAICAVSSLLVLTLLLYTA
:::::::::::::::::::::: .: .::.. ::::::::::::::::::::::::::::
CCDS54 ATATVLVSLVESGQAPKASSRALVGAVGPDAALVDVNVYLIIAICAVSSLLVLTLLLYTA
670 680 690 700 710 720
730 740 750 760 770 780
pF1KE0 LRCSAPSSEGACSLVKPTLVCSSAVGSWSFSQQRRQRVCSGEGPPKTDLMAFSPSLPQGP
::::: .::::. ::::::::::::::.::::: :::::::::::::::::::::..
CCDS54 LRCSALPTEGACAPGKPTLVCSSAVGSWSYSQQRRPRVCSGEGPPKTDLMAFSPSLPDSR
730 740 750 760 770 780
790 800 810 820 830
pF1KE0 SSTDN----------PRQPNPDWRYSASLRAGMHSSVHLEEAGILRAGPGGPDQQWPTVS
. :. :::::::::::::::::::::::::::::::::::::::::::::
CCDS54 DREDQLQTTEESFAKPRQPNPDWRYSASLRAGMHSSVHLEEAGILRAGPGGPDQQWPTVS
790 800 810 820 830 840
840 850 860 870 880 890
pF1KE0 SATPEPEAGEVSPPVGAGVNSNSWTFKYGPGNPKQSGPGELPDKFIIPGSPAIISIRQEP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 SATPEPEAGEVSPPVGAGVNSNSWTFKYGPGNPKQSGPGELPDKFIIPGSPAIISIRQEP
850 860 870 880 890 900
900 910 920 930
pF1KE0 TNSQIDKSDFITFGKKEETKKKKKKKKGNKTQEKKEKGNSTTDNSDQ
:::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 TNSQIDKSDFITFGKKEETKKKKKKKKGNKTQEKKEKGNSTTDNSDQ
910 920 930 940
>>CCDS54915.1 PCDHA3 gene_id:56145|Hs108|chr5 (950 aa)
initn: 4078 init1: 4078 opt: 4100 Z-score: 3428.0 bits: 645.6 E(32554): 1.3e-184
Smith-Waterman score: 5074; 82.9% identity (91.4% similar) in 943 aa overlap (8-937:8-950)
10 20 30 40 50 60
pF1KE0 MVCPNGYDPGGRHLLLFIIILAAWEAGRGQLHYSVPEEAKHGNFVGRIAQDLGLELAELV
:::.. ::: ...::: :.: ::::::: ::::::.:::::::::::::::::
CCDS54 MLFSWREDPGAQCLLLSLLLLAASEVGSGQLHYSVSEEAKHGTFVGRIAQDLGLELAELV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 PRLFRAVCKFRGDLLEVNLQNGILFVNSRIDREELCGRSAECSIHLEVIVERPLQVFHVD
:::::.. : .:::::::::::::::::::::::::::::::::::::::.::::::::.
CCDS54 PRLFRVASKRHGDLLEVNLQNGILFVNSRIDREELCGRSAECSIHLEVIVDRPLQVFHVE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 VEVKDINDNPPVFPATQRNLFIAESRPLDSRFPLEGASDADIGENALLTYRLSPNEYFFL
::::::::: :::: . .::::.::: ::: :::::::::: :.:::: :. .::: :
CCDS54 VEVKDINDNAPVFPMAVKNLFISESRQPGSRFSLEGASDADIGTNSLLTYSLDSTEYFTL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 DVPTSNQQVKPLGLVLRKLLDREETPELHLLLTATDGGKPELTGTVQLLITVLDNNDNAP
:: .....: :::::.: :.::.::. .::.:: ::::::::::.:: ::::: :::::
CCDS54 DVKRNDEEIKSLGLVLKKNLNREDTPKHYLLITAIDGGKPELTGTTQLKITVLDVNDNAP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 VFDRTLYTVKLPENVSIGTLVIHPNASDLDEGLNGDIIYSFSSDVSPDIKSKFHMDPLSG
.:.::.: :.: ::. ::::. ::.:::::.: :: :::..:.: :: ::::.::..:
CCDS54 AFERTIYKVRLLENAPNGTLVVTVNATDLDEGVNKDIAYSFNTDMSADILSKFHLDPVNG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE0 AITVIGHMDFEESRAHKIPVEAVDKGFPPLAGHCTVLVEVVDVNDNAPQLTLTSLSLPIP
:.: :..:::::....: :::.::: ::.. :::::.:.::.:::.:.:.. :::::.
CCDS54 QISVKGNIDFEESKSYEIQVEATDKGNPPMSDHCTVLLEIVDINDNVPELVIQSLSLPVL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE0 EDAQPGTVITLISVFDRDFGVNGQVTCSLTPRVPFKLVSTFKNYYSLVLDSALDRESVSA
::. .:::.:::: ::: ::::::::::::.::::::::::::::::::: ::::::::
CCDS54 EDSPLSTVIALISVSDRDSGVNGQVTCSLTPHVPFKLVSTFKNYYSLVLDSPLDRESVSA
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE0 YELVVTARDGGSPSLWATASVSVEVADVNDNAPAFAQPEYTVFVKENNPPGCHIFTVSAG
:::::::::::::::::::::::::::::::::::.: :::::::::::::::::::::
CCDS54 YELVVTARDGGSPSLWATASVSVEVADVNDNAPAFSQSEYTVFVKENNPPGCHIFTVSAR
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE0 DADAQKNALVSYSLVELRVGERALSSYVSVHAESGKVYALQPLDHEELELLQFQVSARDA
:::::.:::::::::: :::::::::::::::::::::::::::::::::::::::::::
CCDS54 DADAQENALVSYSLVERRVGERALSSYVSVHAESGKVYALQPLDHEELELLQFQVSARDA
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE0 GVPPLGSNVTLQVFVLDENDNAPALLAPRVGGTGGAVRELVPRSVGAGHVVAKVRAVDAD
:::::::::::::::::::::::::: ::::: :::: ::::::::::::::::::::::
CCDS54 GVPPLGSNVTLQVFVLDENDNAPALLMPRVGGIGGAVSELVPRSVGAGHVVAKVRAVDAD
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE0 SGYNAWLSYELQPVAAGASIPFRVGLYTGEISTTRALDETDAPRHRLLVLVKDHGEPSLT
::::::::::::: ..:: ::::::::::::::::::::.::::::::::::::::::::
CCDS54 SGYNAWLSYELQPGTGGARIPFRVGLYTGEISTTRALDEVDAPRHRLLVLVKDHGEPSLT
610 620 630 640 650 660
670 680 690 700 710 720
pF1KE0 ATATVLVSLVESGQAPKASSRASLGIAGPETELVDVNVYLIIAICAVSSLLVLTLLLYTA
::::::::::::::::::::.:: : .:::. :::::::::.::::::::::::::::::
CCDS54 ATATVLVSLVESGQAPKASSQASAGATGPEAALVDVNVYLIVAICAVSSLLVLTLLLYTA
670 680 690 700 710 720
730 740 750 760 770 780
pF1KE0 LRCSAPSSEGACSLVKPTLVCSSAVGSWSFSQQRRQRVCSGEGPPKTDLMAFSPSLPQGP
:::::: .:: :. ::::::::::::::.::::.:::::::: ::::::::::::: :
CCDS54 LRCSAPPTEGDCGPGKPTLVCSSAVGSWSYSQQRQQRVCSGEGLPKTDLMAFSPSLPPCP
730 740 750 760 770 780
790 800 810 820
pF1KE0 SSTD-------------NPRQPNPDWRYSASLRAGMHSSVHLEEAGILRAGPGGPDQQWP
: : .::::::::::::::::::::::::::::::::::::::::::
CCDS54 ISRDREEKQDVDVDLSAKPRQPNPDWRYSASLRAGMHSSVHLEEAGILRAGPGGPDQQWP
790 800 810 820 830 840
830 840 850 860 870 880
pF1KE0 TVSSATPEPEAGEVSPPVGAGVNSNSWTFKYGPGNPKQSGPGELPDKFIIPGSPAIISIR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 TVSSATPEPEAGEVSPPVGAGVNSNSWTFKYGPGNPKQSGPGELPDKFIIPGSPAIISIR
850 860 870 880 890 900
890 900 910 920 930
pF1KE0 QEPTNSQIDKSDFITFGKKEETKKKKKKKKGNKTQEKKEKGNSTTDNSDQ
::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 QEPTNSQIDKSDFITFGKKEETKKKKKKKKGNKTQEKKEKGNSTTDNSDQ
910 920 930 940 950
>>CCDS4240.1 PCDHA13 gene_id:56136|Hs108|chr5 (950 aa)
initn: 3982 init1: 3982 opt: 4015 Z-score: 3357.1 bits: 632.5 E(32554): 1.1e-180
Smith-Waterman score: 4992; 81.5% identity (91.0% similar) in 942 aa overlap (9-937:9-950)
10 20 30 40 50 60
pF1KE0 MVCPNGYDPGGRHLLLFIIILAAWEAGRGQLHYSVPEEAKHGNFVGRIAQDLGLELAELV
: :.:::...::::::.: ::::::::::::::.:::::::::::::::::
CCDS42 MLSSWQGGPRPRQLLLWLLILAAWETGSGQLHYSVPEEAKHGTFVGRIAQDLGLELAELV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 PRLFRAVCKFRGDLLEVNLQNGILFVNSRIDREELCGRSAECSIHLEVIVERPLQVFHVD
:::::.. : .:::::::::::::::::::::::::::::::::::::::.::::::::.
CCDS42 PRLFRVASKRHGDLLEVNLQNGILFVNSRIDREELCGRSAECSIHLEVIVDRPLQVFHVE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 VEVKDINDNPPVFPATQRNLFIAESRPLDSRFPLEGASDADIGENALLTYRLSPNEYFFL
:.:.:::::::.:: ... ..:::::: ..::::.:::::::: :. :::::.::.:: :
CCDS42 VKVRDINDNPPIFPESKKRIIIAESRPPETRFPLDGASDADIGVNSALTYRLDPNDYFTL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 DVPTSNQQVKPLGLVLRKLLDREETPELHLLLTATDGGKPELTGTVQLLITVLDNNDNAP
:. .: .:.. :.::::: ::::: : :::::.::::::::::::::::.:: :::::
CCDS42 DAQNSLEQMSSLSLVLRKTLDREEIQEHSLLLTASDGGKPELTGTVQLLITILDVNDNAP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 VFDRTLYTVKLPENVSIGTLVIHPNASDLDEGLNGDIIYSFSSDVSPDIKSKFHMDPLSG
: ...: : . ::. :::::. ::.: :.: ::::.::: : : . : ..: .:
CCDS42 EFYQSVYKVTVLENAFNGTLVIKLNATDPDDGTNGDIVYSFRRPVWPAVVYAFTINPNNG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE0 AITVIGHMDFEESRAHKIPVEAVDKGFPPLAGHCTVLVEVVDVNDNAPQLTLTSLSLPIP
: . :..::::.. ..: ::::::: :.:::::.::::.:::::::..:.:::::::
CCDS42 EIRTKGKLDFEEKKLYEISVEAVDKGNIPMAGHCTLLVEVLDVNDNAPEVTITSLSLPIR
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE0 EDAQPGTVITLISVFDRDFGVNGQVTCSLTPRVPFKLVSTFKNYYSLVLDSALDRESVSA
::.::...:.:::: ::: : ::::::.:::.::::::::.:::::::::::::::::::
CCDS42 EDTQPSAIIALISVSDRDSGSNGQVTCTLTPHVPFKLVSTYKNYYSLVLDSALDRESVSA
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE0 YELVVTARDGGSPSLWATASVSVEVADVNDNAPAFAQPEYTVFVKENNPPGCHIFTVSAG
::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::
CCDS42 YELVVTARDGGSPSLWATASVSVGVADVNDNAPAFAQPEYTVFVKENNPPGCHIFTVSAQ
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE0 DADAQKNALVSYSLVELRVGERALSSYVSVHAESGKVYALQPLDHEELELLQFQVSARDA
:::::.:::::::::: ::::::::::::::::::::::::::::::::::::::::::.
CCDS42 DADAQENALVSYSLVERRVGERALSSYVSVHAESGKVYALQPLDHEELELLQFQVSARDS
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE0 GVPPLGSNVTLQVFVLDENDNAPALLAPRVGGTGGAVRELVPRSVGAGHVVAKVRAVDAD
::::::::::::::::::::::::::.: .:..::.: ::.:::::::::::::::::::
CCDS42 GVPPLGSNVTLQVFVLDENDNAPALLTPGAGSAGGTVSELMPRSVGAGHVVAKVRAVDAD
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE0 SGYNAWLSYELQPVAAGASIPFRVGLYTGEISTTRALDETDAPRHRLLVLVKDHGEPSLT
:::::::::::: .:.:: :::::::::::::::: :::.:::.:::::::::::::.::
CCDS42 SGYNAWLSYELQLAAVGARIPFRVGLYTGEISTTRPLDEVDAPHHRLLVLVKDHGEPALT
610 620 630 640 650 660
670 680 690 700 710 720
pF1KE0 ATATVLVSLVESGQAPKASSRASLGIAGPETELVDVNVYLIIAICAVSSLLVLTLLLYTA
::::::.:::::::::.:::::: : .:::. ::::::::::::::::::::::::::::
CCDS42 ATATVLLSLVESGQAPQASSRASAGAVGPEAALVDVNVYLIIAICAVSSLLVLTLLLYTA
670 680 690 700 710 720
730 740 750 760 770
pF1KE0 LRCSAPSSEGACSLVKPTLVCSSAVGSWSFSQQRRQRVCSGEGPPKTDLMAFSPSLPQ--
:::::: .::::. :::::::::.::::.::::: :::::::: ::::::::::::
CCDS42 LRCSAPPTEGACAPGKPTLVCSSAAGSWSYSQQRRPRVCSGEGPHKTDLMAFSPSLPPCL
730 740 750 760 770 780
780 790 800 810 820
pF1KE0 ------GPSSTDN-----PRQPNPDWRYSASLRAGMHSSVHLEEAGILRAGPGGPDQQWP
: :. ::::::::::::::::::::::::::::::::::::::::::
CCDS42 GSAEGTGQREEDSECLKEPRQPNPDWRYSASLRAGMHSSVHLEEAGILRAGPGGPDQQWP
790 800 810 820 830 840
830 840 850 860 870 880
pF1KE0 TVSSATPEPEAGEVSPPVGAGVNSNSWTFKYGPGNPKQSGPGELPDKFIIPGSPAIISIR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 TVSSATPEPEAGEVSPPVGAGVNSNSWTFKYGPGNPKQSGPGELPDKFIIPGSPAIISIR
850 860 870 880 890 900
890 900 910 920 930
pF1KE0 QEPTNSQIDKSDFITFGKKEETKKKKKKKKGNKTQEKKEKGNSTTDNSDQ
::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 QEPTNSQIDKSDFITFGKKEETKKKKKKKKGNKTQEKKEKGNSTTDNSDQ
910 920 930 940 950
>>CCDS54913.1 PCDHA1 gene_id:56147|Hs108|chr5 (950 aa)
initn: 3969 init1: 3969 opt: 3991 Z-score: 3337.0 bits: 628.8 E(32554): 1.5e-179
Smith-Waterman score: 4968; 81.7% identity (91.4% similar) in 941 aa overlap (10-937:10-950)
10 20 30 40 50 60
pF1KE0 MVCPNGYDPGGRHLLLFIIILAAWEAGRGQLHYSVPEEAKHGNFVGRIAQDLGLELAELV
:.: :::....:::::.: ::::::.:::::::.::::.::::::::::::
CCDS54 MVFSRRGGLGARDLLLWLLLLAAWEVGSGQLHYSIPEEAKHGTFVGRVAQDLGLELAELV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 PRLFRAVCKFRGDLLEVNLQNGILFVNSRIDREELCGRSAECSIHLEVIVERPLQVFHVD
:::::.. : . :::::::::::::::::::::::: :::::::::.:..::::::::.
CCDS54 PRLFRVASKTHRDLLEVNLQNGILFVNSRIDREELCQWSAECSIHLELIADRPLQVFHVE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 VEVKDINDNPPVFPATQRNLFIAESRPLDSRFPLEGASDADIGENALLTYRLSPNEYFFL
:.::::::::::: . .. .:: ::: :.::::.:::.::::: :::::: :::..:: :
CCDS54 VKVKDINDNPPVFRGREQIIFIPESRLLNSRFPIEGAADADIGANALLTYTLSPSDYFSL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 DVPTSNQQVKPLGLVLRKLLDREETPELHLLLTATDGGKPELTGTVQLLITVLDNNDNAP
:: .:.. : : : ::: ::::::::::::::::::::::: :::.::::::: :::::
CCDS54 DVEASDELSKSLWLELRKYLDREETPELHLLLTATDGGKPELQGTVELLITVLDVNDNAP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 VFDRTLYTVKLPENVSIGTLVIHPNASDLDEGLNGDIIYSFSSDVSPDIKSKFHMDPLSG
.::...: :.: :... :::: :::: :::.::....::.: .: ::. ::..: ::
CCDS54 LFDQAVYRVHLLETTANGTLVTTLNASDADEGVNGEVVFSFDSGISRDIQEKFKVDSSSG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE0 AITVIGHMDFEESRAHKIPVEAVDKGFPPLAGHCTVLVEVVDVNDNAPQLTLTSLSLPIP
: .: ..:.::.....: :.::::: ::...:: :::.:.:::::::.:..::: :::
CCDS54 EIRLIDKLDYEETKSYEIQVKAVDKGSPPMSNHCKVLVKVLDVNDNAPELAVTSLYLPIR
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE0 EDAQPGTVITLISVFDRDFGVNGQVTCSLTPRVPFKLVSTFKNYYSLVLDSALDRESVSA
::: .:::.::.: ::: :.:::::::: :.:::::::::::::::::::::::::.:.
CCDS54 EDAPLSTVIALITVSDRDSGANGQVTCSLMPHVPFKLVSTFKNYYSLVLDSALDRESLSV
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE0 YELVVTARDGGSPSLWATASVSVEVADVNDNAPAFAQPEYTVFVKENNPPGCHIFTVSAG
::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::
CCDS54 YELVVTARDGGSPSLWATARVSVEVADVNDNAPAFAQPEYTVFVKENNPPGCHIFTVSAR
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE0 DADAQKNALVSYSLVELRVGERALSSYVSVHAESGKVYALQPLDHEELELLQFQVSARDA
:::::.:::::::::: ::::::::.::::::::::::::::::::::::::::::::::
CCDS54 DADAQENALVSYSLVERRVGERALSNYVSVHAESGKVYALQPLDHEELELLQFQVSARDA
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE0 GVPPLGSNVTLQVFVLDENDNAPALLAPRVGGTGGAVRELVPRSVGAGHVVAKVRAVDAD
::::::::::::::::::::::::::::::::: ::: ::::: ::::::::::::::::
CCDS54 GVPPLGSNVTLQVFVLDENDNAPALLAPRVGGTIGAVSELVPRLVGAGHVVAKVRAVDAD
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE0 SGYNAWLSYELQPVAAGASIPFRVGLYTGEISTTRALDETDAPRHRLLVLVKDHGEPSLT
:::::::::::::.:.:: ::::::::::::::::.:::.: :.::::::::::::.::
CCDS54 SGYNAWLSYELQPAAGGARIPFRVGLYTGEISTTRVLDEADLSRYRLLVLVKDHGEPALT
610 620 630 640 650 660
670 680 690 700 710 720
pF1KE0 ATATVLVSLVESGQAPKASSRASLGIAGPETELVDVNVYLIIAICAVSSLLVLTLLLYTA
:::::::::::::::::::::::.:.::::. ::::::::::::::::::::::::::::
CCDS54 ATATVLVSLVESGQAPKASSRASVGVAGPEAALVDVNVYLIIAICAVSSLLVLTLLLYTA
670 680 690 700 710 720
730 740 750 760 770
pF1KE0 LRCSAPSSEGACSLVKPTLVCSSAVGSWSFSQQRRQRVCSGEGPPKTDLMAFSPSL-P--
::::.: .::: :::::::::.:::: ::::::::::.:::::::::::::.: :
CCDS54 LRCSVPPTEGAYVPGKPTLVCSSALGSWSNSQQRRQRVCSSEGPPKTDLMAFSPGLSPSL
730 740 750 760 770 780
780 790 800 810 820
pF1KE0 -------QGPSSTD---NPRQPNPDWRYSASLRAGMHSSVHLEEAGILRAGPGGPDQQWP
: .. : :::::::::::::::::::::::::::::::::::::::::::
CCDS54 NTSERNEQPEANLDLSGNPRQPNPDWRYSASLRAGMHSSVHLEEAGILRAGPGGPDQQWP
790 800 810 820 830 840
830 840 850 860 870 880
pF1KE0 TVSSATPEPEAGEVSPPVGAGVNSNSWTFKYGPGNPKQSGPGELPDKFIIPGSPAIISIR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 TVSSATPEPEAGEVSPPVGAGVNSNSWTFKYGPGNPKQSGPGELPDKFIIPGSPAIISIR
850 860 870 880 890 900
890 900 910 920 930
pF1KE0 QEPTNSQIDKSDFITFGKKEETKKKKKKKKGNKTQEKKEKGNSTTDNSDQ
::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 QEPTNSQIDKSDFITFGKKEETKKKKKKKKGNKTQEKKEKGNSTTDNSDQ
910 920 930 940 950
>>CCDS47281.1 PCDHA6 gene_id:56142|Hs108|chr5 (950 aa)
initn: 5002 init1: 3971 opt: 3989 Z-score: 3335.4 bits: 628.5 E(32554): 1.8e-179
Smith-Waterman score: 4979; 81.5% identity (91.3% similar) in 941 aa overlap (10-937:10-950)
10 20 30 40 50 60
pF1KE0 MVCPNGYDPGGRHLLLFIIILAAWEAGRGQLHYSVPEEAKHGNFVGRIAQDLGLELAELV
: . ::: ...::::..: ::::::::::::::.:::::::::::::::::
CCDS47 MVFTPEDRLGKQCLLLPLLLLAAWKVGSGQLHYSVPEEAKHGTFVGRIAQDLGLELAELV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 PRLFRAVCKFRGDLLEVNLQNGILFVNSRIDREELCGRSAECSIHLEVIVERPLQVFHVD
::::: . : : ::::::::::::::::::::::::::::::::::::::.:::::::::
CCDS47 PRLFRMASKDREDLLEVNLQNGILFVNSRIDREELCGRSAECSIHLEVIVDRPLQVFHVD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 VEVKDINDNPPVFPATQRNLFIAESRPLDSRFPLEGASDADIGENALLTYRLSPNEYFFL
:::.:::::::.::. .. ..: ::: :: ::::::::::.: :..:::.:: .::: :
CCDS47 VEVRDINDNPPLFPVEEQRVLIYESRLPDSVFPLEGASDADVGSNSILTYKLSSSEYFGL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 DVPTSNQQVKPLGLVLRKLLDREETPELHLLLTATDGGKPELTGTVQLLITVLDNNDNAP
:: .... : .::.:.: :::::.: .:.::::::::::::::::::.:::: :::::
CCDS47 DVKINSDDNKQIGLLLKKSLDREEAPAHNLFLTATDGGKPELTGTVQLLVTVLDVNDNAP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 VFDRTLYTVKLPENVSIGTLVIHPNASDLDEGLNGDIIYSFSSDVSPDIKSKFHMDPLSG
.:... : :.. ::.. :: ::. :::: ::: :: : :::.: :. . ..: .: .:
CCDS47 TFEQSEYEVRIFENADNGTTVIRLNASDRDEGANGAISYSFNSLVAAMVIDHFSIDRNTG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE0 AITVIGHMDFEESRAHKIPVEAVDKGFPPLAGHCTVLVEVVDVNDNAPQLTLTSLSLPIP
:.. :..:::. .:: ..:.::: ::.::::::::...: :::.:...:::::::.
CCDS47 EIVIRGNLDFEQENLYKILIDATDKGHPPMAGHCTVLVRILDKNDNVPEIALTSLSLPVR
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE0 EDAQPGTVITLISVFDRDFGVNGQVTCSLTPRVPFKLVSTFKNYYSLVLDSALDRESVSA
:::: ::::.:::: : : :.::::.:::::.::::::::::::::::::::::::::::
CCDS47 EDAQFGTVIALISVNDLDSGANGQVNCSLTPHVPFKLVSTFKNYYSLVLDSALDRESVSA
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE0 YELVVTARDGGSPSLWATASVSVEVADVNDNAPAFAQPEYTVFVKENNPPGCHIFTVSAG
::::::::::::::::::::.::::::.:::::::::::::::::::::::::::::::
CCDS47 YELVVTARDGGSPSLWATASLSVEVADMNDNAPAFAQPEYTVFVKENNPPGCHIFTVSAR
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE0 DADAQKNALVSYSLVELRVGERALSSYVSVHAESGKVYALQPLDHEELELLQFQVSARDA
:::::.:::::::::: ::::::::::.::::::::::::::::::::::::::::::::
CCDS47 DADAQENALVSYSLVERRVGERALSSYISVHAESGKVYALQPLDHEELELLQFQVSARDA
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE0 GVPPLGSNVTLQVFVLDENDNAPALLAPRVGGTGGAVRELVPRSVGAGHVVAKVRAVDAD
::::::::::::::::::::::::::::::::::::: ::::::.:::.:::::::::::
CCDS47 GVPPLGSNVTLQVFVLDENDNAPALLAPRVGGTGGAVSELVPRSLGAGQVVAKVRAVDAD
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE0 SGYNAWLSYELQPVAAGASIPFRVGLYTGEISTTRALDETDAPRHRLLVLVKDHGEPSLT
::::::::::::: :..: .:::::::::::::::.:::.:.:::::::::::::::.::
CCDS47 SGYNAWLSYELQPPASSARFPFRVGLYTGEISTTRVLDEADSPRHRLLVLVKDHGEPALT
610 620 630 640 650 660
670 680 690 700 710 720
pF1KE0 ATATVLVSLVESGQAPKASSRASLGIAGPETELVDVNVYLIIAICAVSSLLVLTLLLYTA
:::::::::::::::::::::::.: ::::. ::::::::::::::::::::::::::::
CCDS47 ATATVLVSLVESGQAPKASSRASVGAAGPEAALVDVNVYLIIAICAVSSLLVLTLLLYTA
670 680 690 700 710 720
730 740 750 760 770 780
pF1KE0 LRCSAPSSEGACSLVKPTLVCSSAVGSWSFSQQRRQRVCSGEGPPKTDLMAFSPSLPQGP
:::::: .::::. ::::::::::::::.:::::::::::::::: ::::::::: :
CCDS47 LRCSAPPTEGACTADKPTLVCSSAVGSWSYSQQRRQRVCSGEGPPKMDLMAFSPSLSPCP
730 740 750 760 770 780
790 800 810 820
pF1KE0 ---SSTDN----------PRQPNPDWRYSASLRAGMHSSVHLEEAGILRAGPGGPDQQWP
....: ::::::::::::::::::::::::::::::::::::::::::
CCDS47 IMMGKAENQDLNEDHDAKPRQPNPDWRYSASLRAGMHSSVHLEEAGILRAGPGGPDQQWP
790 800 810 820 830 840
830 840 850 860 870 880
pF1KE0 TVSSATPEPEAGEVSPPVGAGVNSNSWTFKYGPGNPKQSGPGELPDKFIIPGSPAIISIR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 TVSSATPEPEAGEVSPPVGAGVNSNSWTFKYGPGNPKQSGPGELPDKFIIPGSPAIISIR
850 860 870 880 890 900
890 900 910 920 930
pF1KE0 QEPTNSQIDKSDFITFGKKEETKKKKKKKKGNKTQEKKEKGNSTTDNSDQ
::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 QEPTNSQIDKSDFITFGKKEETKKKKKKKKGNKTQEKKEKGNSTTDNSDQ
910 920 930 940 950
>>CCDS54919.1 PCDHA8 gene_id:56140|Hs108|chr5 (950 aa)
initn: 4971 init1: 3940 opt: 3956 Z-score: 3307.8 bits: 623.4 E(32554): 6.3e-178
Smith-Waterman score: 4949; 80.9% identity (91.0% similar) in 941 aa overlap (10-937:10-950)
10 20 30 40 50 60
pF1KE0 MVCPNGYDPGGRHLLLFIIILAAWEAGRGQLHYSVPEEAKHGNFVGRIAQDLGLELAELV
:. .:::....::::..: ::::::::::::::.:::::::::::::::::
CCDS54 MDYHWRGELGSWRLLLLLLLLAAWKVGSGQLHYSVPEEAKHGTFVGRIAQDLGLELAELV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 PRLFRAVCKFRGDLLEVNLQNGILFVNSRIDREELCGRSAECSIHLEVIVERPLQVFHVD
:::::.. : . :::::.::::::::::::::::::::::::::::::::.:::::::::
CCDS54 PRLFRVASKRHRDLLEVSLQNGILFVNSRIDREELCGRSAECSIHLEVIVDRPLQVFHVD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 VEVKDINDNPPVFPATQRNLFIAESRPLDSRFPLEGASDADIGENALLTYRLSPNEYFFL
:::::.::::::: . ...::..::: :::::::::::::.: :..:::::: ..::.:
CCDS54 VEVKDVNDNPPVFRVKDQKLFVSESRMPDSRFPLEGASDADVGANSVLTYRLSSHDYFML
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 DVPTSNQQVKPLGLVLRKLLDREETPELHLLLTATDGGKPELTGTVQLLITVLDNNDNAP
:: ..:.. : . ::::: ::::..: ::.::::::::::::::::::.:::: :::::
CCDS54 DVNSKNDENKLVELVLRKSLDREDAPAHHLFLTATDGGKPELTGTVQLLVTVLDVNDNAP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 VFDRTLYTVKLPENVSIGTLVIHPNASDLDEGLNGDIIYSFSSDVSPDIKSKFHMDPLSG
.:... : :.. ::.. :: ::. :::: ::: :: : :::.: : . ..: .: .:
CCDS54 TFEQSEYEVRIFENADNGTTVIKLNASDPDEGANGAISYSFNSLVETMVIDHFSIDRNTG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE0 AITVIGHMDFEESRAHKIPVEAVDKGFPPLAGHCTVLVEVVDVNDNAPQLTLTSLSLPIP
:.. :..:::. .:: ..:.::: ::.::::::::...: :::.:...:::::::.
CCDS54 EIVIRGNLDFEQENLYKILIDATDKGHPPMAGHCTVLVRILDKNDNVPEIALTSLSLPVR
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE0 EDAQPGTVITLISVFDRDFGVNGQVTCSLTPRVPFKLVSTFKNYYSLVLDSALDRESVSA
:::: ::::.:::: : : :.:::::::: :.:::::::::::::::::::::::: :::
CCDS54 EDAQFGTVIALISVNDLDSGANGQVTCSLMPHVPFKLVSTFKNYYSLVLDSALDRERVSA
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE0 YELVVTARDGGSPSLWATASVSVEVADVNDNAPAFAQPEYTVFVKENNPPGCHIFTVSAG
::::::::::::::::::::.::::::::::::::::::::::::::::::::::::::
CCDS54 YELVVTARDGGSPSLWATASLSVEVADVNDNAPAFAQPEYTVFVKENNPPGCHIFTVSAR
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE0 DADAQKNALVSYSLVELRVGERALSSYVSVHAESGKVYALQPLDHEELELLQFQVSARDA
:::::.:::::::::: :::::.::::.:::.::::::::::::::::::::::::::::
CCDS54 DADAQENALVSYSLVERRVGERSLSSYISVHTESGKVYALQPLDHEELELLQFQVSARDA
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE0 GVPPLGSNVTLQVFVLDENDNAPALLAPRVGGTGGAVRELVPRSVGAGHVVAKVRAVDAD
:::::::::::::::::::::::::: :::::::::. .:::::::::::::::::::::
CCDS54 GVPPLGSNVTLQVFVLDENDNAPALLEPRVGGTGGAASKLVPRSVGAGHVVAKVRAVDAD
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE0 SGYNAWLSYELQPVAAGASIPFRVGLYTGEISTTRALDETDAPRHRLLVLVKDHGEPSLT
:::::::::::::.:.. ::::::::::::::::.:::.:.:::::::::::::::.::
CCDS54 SGYNAWLSYELQPAASSPRIPFRVGLYTGEISTTRVLDEADSPRHRLLVLVKDHGEPALT
610 620 630 640 650 660
670 680 690 700 710 720
pF1KE0 ATATVLVSLVESGQAPKASSRASLGIAGPETELVDVNVYLIIAICAVSSLLVLTLLLYTA
::::::::::::::::::::: : :. :::. ::::::::::::::::::::::::::::
CCDS54 ATATVLVSLVESGQAPKASSRQSAGVLGPEAALVDVNVYLIIAICAVSSLLVLTLLLYTA
670 680 690 700 710 720
730 740 750 760 770 780
pF1KE0 LRCSAPSSEGACSLVKPTLVCSSAVGSWSFSQQRRQRVCSGEGPPKTDLMAFSPSLPQGP
::::: .::.: ::::::::::::::.:::. ::::::::::::::::::: ::
CCDS54 LRCSALPTEGGCRAGKPTLVCSSAVGSWSYSQQQPQRVCSGEGPPKTDLMAFSPCLPPDL
730 740 750 760 770 780
790 800 810 820
pF1KE0 SSTD-------------NPRQPNPDWRYSASLRAGMHSSVHLEEAGILRAGPGGPDQQWP
.:.: .::::::::::::::::::::::::::::::::::::::::::
CCDS54 GSVDVGEEQDLNVDHGLKPRQPNPDWRYSASLRAGMHSSVHLEEAGILRAGPGGPDQQWP
790 800 810 820 830 840
830 840 850 860 870 880
pF1KE0 TVSSATPEPEAGEVSPPVGAGVNSNSWTFKYGPGNPKQSGPGELPDKFIIPGSPAIISIR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 TVSSATPEPEAGEVSPPVGAGVNSNSWTFKYGPGNPKQSGPGELPDKFIIPGSPAIISIR
850 860 870 880 890 900
890 900 910 920 930
pF1KE0 QEPTNSQIDKSDFITFGKKEETKKKKKKKKGNKTQEKKEKGNSTTDNSDQ
::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 QEPTNSQIDKSDFITFGKKEETKKKKKKKKGNKTQEKKEKGNSTTDNSDQ
910 920 930 940 950
937 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 05:24:00 2016 done: Fri Nov 4 05:24:01 2016
Total Scan time: 4.970 Total Display time: 0.430
Function used was FASTA [36.3.4 Apr, 2011]