Result of FASTA (omim) for
pFN21AB9940
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB9940, 657 aa
1>>>pF1KB9940 657 - 657 aa - 657 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.1195+/-0.000427; mu= 21.3140+/- 0.026
mean_var=73.1316+/-15.404, 0's: 0 Z-trim(110.0): 26 B-trim: 36 in 1/53
Lambda= 0.149976
statistics sampled from 18214 (18237) to 18214 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.55), E-opt: 0.2 (0.214), width: 16
Scan time: 7.490
The best scores are: opt bits E(85289)
NP_536856 (OMIM: 606105) choline transporter-like ( 657) 4377 957.0 0
XP_005251912 (OMIM: 606105) PREDICTED: choline tra ( 719) 4347 950.6 0
NP_001273659 (OMIM: 606105) choline transporter-li ( 652) 4339 948.8 0
NP_001317660 (OMIM: 606105) choline transporter-li ( 654) 4339 948.8 0
XP_006717091 (OMIM: 606105) PREDICTED: choline tra ( 675) 4302 940.8 0
XP_006717090 (OMIM: 606105) PREDICTED: choline tra ( 737) 4272 934.3 0
XP_006717092 (OMIM: 606105) PREDICTED: choline tra ( 672) 4264 932.6 0
XP_016870049 (OMIM: 606105) PREDICTED: choline tra ( 624) 4078 892.3 0
NP_001138528 (OMIM: 606106) choline transporter-li ( 704) 689 159.1 5.1e-38
NP_065161 (OMIM: 606106) choline transporter-like ( 706) 689 159.1 5.1e-38
XP_005260056 (OMIM: 606106) PREDICTED: choline tra ( 709) 679 156.9 2.3e-37
XP_005260054 (OMIM: 606106) PREDICTED: choline tra ( 711) 679 156.9 2.3e-37
NP_001171516 (OMIM: 606107) choline transporter-li ( 634) 524 123.3 2.6e-27
NP_001171515 (OMIM: 606107) choline transporter-li ( 668) 524 123.4 2.7e-27
NP_079533 (OMIM: 606107) choline transporter-like ( 710) 524 123.4 2.9e-27
>>NP_536856 (OMIM: 606105) choline transporter-like prot (657 aa)
initn: 4377 init1: 4377 opt: 4377 Z-score: 5116.5 bits: 957.0 E(85289): 0
Smith-Waterman score: 4377; 100.0% identity (100.0% similar) in 657 aa overlap (1-657:1-657)
10 20 30 40 50 60
pF1KB9 MGCCSSASSAAQSSKREWKPLEDRSCTDIPWLLLFILFCIGMGFICGFSIATGAAARLVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_536 MGCCSSASSAAQSSKREWKPLEDRSCTDIPWLLLFILFCIGMGFICGFSIATGAAARLVS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 GYDSYGNICGQKNTKLEAIPNSGMDHTQRKYVFFLDPCNLDLINRKIKSVALCVAACPRQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_536 GYDSYGNICGQKNTKLEAIPNSGMDHTQRKYVFFLDPCNLDLINRKIKSVALCVAACPRQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 ELKTLSDVQKFAEINGSALCSYNLKPSEYTTSPKSSVLCPKLPVPASAPIPFFHRCAPVN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_536 ELKTLSDVQKFAEINGSALCSYNLKPSEYTTSPKSSVLCPKLPVPASAPIPFFHRCAPVN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 ISCYAKFAEALITFVSDNSVLHRLISGVMTSKEIILGLCLLSLVLSMILMVIIRYISRVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_536 ISCYAKFAEALITFVSDNSVLHRLISGVMTSKEIILGLCLLSLVLSMILMVIIRYISRVL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 VWILTILVILGSLGGTGVLWWLYAKQRRSPKETVTPEQLQIAEDNLRALLIYAISATVFT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_536 VWILTILVILGSLGGTGVLWWLYAKQRRSPKETVTPEQLQIAEDNLRALLIYAISATVFT
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 VILFLIMLVMRKRVALTIALFHVAGKVFIHLPLLVFQPFWTFFALVLFWVYWIMTLLFLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_536 VILFLIMLVMRKRVALTIALFHVAGKVFIHLPLLVFQPFWTFFALVLFWVYWIMTLLFLG
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 TTGSPVQNEQGFVEFKISGPLQYMWWYHVVGLIWISEFILACQQMTVAGAVVTYYFTRDK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_536 TTGSPVQNEQGFVEFKISGPLQYMWWYHVVGLIWISEFILACQQMTVAGAVVTYYFTRDK
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB9 RNLPFTPILASVNRLIRYHLGTVAKGSFIITLVKIPRMILMYIHSQLKGKENACARCVLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_536 RNLPFTPILASVNRLIRYHLGTVAKGSFIITLVKIPRMILMYIHSQLKGKENACARCVLK
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB9 SCICCLWCLEKCLNYLNQNAYTATAINSTNFCTSAKDAFVILVENALRVATINTVGDFML
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_536 SCICCLWCLEKCLNYLNQNAYTATAINSTNFCTSAKDAFVILVENALRVATINTVGDFML
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB9 FLGKVLIVCSTGLAGIMLLNYQQDYTVWVLPLIIVCLFAFLVAHCFLSIYEMVVDVLFLC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_536 FLGKVLIVCSTGLAGIMLLNYQQDYTVWVLPLIIVCLFAFLVAHCFLSIYEMVVDVLFLC
550 560 570 580 590 600
610 620 630 640 650
pF1KB9 FAIDTKYNDGSPGREFYMDKVLMEFVENSRKAMKEAGKGGVADSRELKPMASGASSA
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_536 FAIDTKYNDGSPGREFYMDKVLMEFVENSRKAMKEAGKGGVADSRELKPMASGASSA
610 620 630 640 650
>>XP_005251912 (OMIM: 606105) PREDICTED: choline transpo (719 aa)
initn: 4347 init1: 4347 opt: 4347 Z-score: 5080.9 bits: 950.6 E(85289): 0
Smith-Waterman score: 4347; 99.7% identity (100.0% similar) in 653 aa overlap (1-653:1-653)
10 20 30 40 50 60
pF1KB9 MGCCSSASSAAQSSKREWKPLEDRSCTDIPWLLLFILFCIGMGFICGFSIATGAAARLVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MGCCSSASSAAQSSKREWKPLEDRSCTDIPWLLLFILFCIGMGFICGFSIATGAAARLVS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 GYDSYGNICGQKNTKLEAIPNSGMDHTQRKYVFFLDPCNLDLINRKIKSVALCVAACPRQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GYDSYGNICGQKNTKLEAIPNSGMDHTQRKYVFFLDPCNLDLINRKIKSVALCVAACPRQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 ELKTLSDVQKFAEINGSALCSYNLKPSEYTTSPKSSVLCPKLPVPASAPIPFFHRCAPVN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ELKTLSDVQKFAEINGSALCSYNLKPSEYTTSPKSSVLCPKLPVPASAPIPFFHRCAPVN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 ISCYAKFAEALITFVSDNSVLHRLISGVMTSKEIILGLCLLSLVLSMILMVIIRYISRVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ISCYAKFAEALITFVSDNSVLHRLISGVMTSKEIILGLCLLSLVLSMILMVIIRYISRVL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 VWILTILVILGSLGGTGVLWWLYAKQRRSPKETVTPEQLQIAEDNLRALLIYAISATVFT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VWILTILVILGSLGGTGVLWWLYAKQRRSPKETVTPEQLQIAEDNLRALLIYAISATVFT
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 VILFLIMLVMRKRVALTIALFHVAGKVFIHLPLLVFQPFWTFFALVLFWVYWIMTLLFLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VILFLIMLVMRKRVALTIALFHVAGKVFIHLPLLVFQPFWTFFALVLFWVYWIMTLLFLG
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 TTGSPVQNEQGFVEFKISGPLQYMWWYHVVGLIWISEFILACQQMTVAGAVVTYYFTRDK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TTGSPVQNEQGFVEFKISGPLQYMWWYHVVGLIWISEFILACQQMTVAGAVVTYYFTRDK
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB9 RNLPFTPILASVNRLIRYHLGTVAKGSFIITLVKIPRMILMYIHSQLKGKENACARCVLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RNLPFTPILASVNRLIRYHLGTVAKGSFIITLVKIPRMILMYIHSQLKGKENACARCVLK
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB9 SCICCLWCLEKCLNYLNQNAYTATAINSTNFCTSAKDAFVILVENALRVATINTVGDFML
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SCICCLWCLEKCLNYLNQNAYTATAINSTNFCTSAKDAFVILVENALRVATINTVGDFML
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB9 FLGKVLIVCSTGLAGIMLLNYQQDYTVWVLPLIIVCLFAFLVAHCFLSIYEMVVDVLFLC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 FLGKVLIVCSTGLAGIMLLNYQQDYTVWVLPLIIVCLFAFLVAHCFLSIYEMVVDVLFLC
550 560 570 580 590 600
610 620 630 640 650
pF1KB9 FAIDTKYNDGSPGREFYMDKVLMEFVENSRKAMKEAGKGGVADSRELKPMASGASSA
::::::::::::::::::::::::::::::::::::::::::::::::::..:
XP_005 FAIDTKYNDGSPGREFYMDKVLMEFVENSRKAMKEAGKGGVADSRELKPMVGGDEEVAAL
610 620 630 640 650 660
XP_005 QEFHFHFLSLSVFTDCTSSGEAFVICITQDMLLFLFVCLPITWMAEFLSQLRPPSIKVS
670 680 690 700 710
>>NP_001273659 (OMIM: 606105) choline transporter-like p (652 aa)
initn: 4339 init1: 4339 opt: 4339 Z-score: 5072.2 bits: 948.8 E(85289): 0
Smith-Waterman score: 4339; 100.0% identity (100.0% similar) in 650 aa overlap (1-650:1-650)
10 20 30 40 50 60
pF1KB9 MGCCSSASSAAQSSKREWKPLEDRSCTDIPWLLLFILFCIGMGFICGFSIATGAAARLVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MGCCSSASSAAQSSKREWKPLEDRSCTDIPWLLLFILFCIGMGFICGFSIATGAAARLVS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 GYDSYGNICGQKNTKLEAIPNSGMDHTQRKYVFFLDPCNLDLINRKIKSVALCVAACPRQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GYDSYGNICGQKNTKLEAIPNSGMDHTQRKYVFFLDPCNLDLINRKIKSVALCVAACPRQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 ELKTLSDVQKFAEINGSALCSYNLKPSEYTTSPKSSVLCPKLPVPASAPIPFFHRCAPVN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ELKTLSDVQKFAEINGSALCSYNLKPSEYTTSPKSSVLCPKLPVPASAPIPFFHRCAPVN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 ISCYAKFAEALITFVSDNSVLHRLISGVMTSKEIILGLCLLSLVLSMILMVIIRYISRVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ISCYAKFAEALITFVSDNSVLHRLISGVMTSKEIILGLCLLSLVLSMILMVIIRYISRVL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 VWILTILVILGSLGGTGVLWWLYAKQRRSPKETVTPEQLQIAEDNLRALLIYAISATVFT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VWILTILVILGSLGGTGVLWWLYAKQRRSPKETVTPEQLQIAEDNLRALLIYAISATVFT
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 VILFLIMLVMRKRVALTIALFHVAGKVFIHLPLLVFQPFWTFFALVLFWVYWIMTLLFLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VILFLIMLVMRKRVALTIALFHVAGKVFIHLPLLVFQPFWTFFALVLFWVYWIMTLLFLG
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 TTGSPVQNEQGFVEFKISGPLQYMWWYHVVGLIWISEFILACQQMTVAGAVVTYYFTRDK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TTGSPVQNEQGFVEFKISGPLQYMWWYHVVGLIWISEFILACQQMTVAGAVVTYYFTRDK
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB9 RNLPFTPILASVNRLIRYHLGTVAKGSFIITLVKIPRMILMYIHSQLKGKENACARCVLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RNLPFTPILASVNRLIRYHLGTVAKGSFIITLVKIPRMILMYIHSQLKGKENACARCVLK
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB9 SCICCLWCLEKCLNYLNQNAYTATAINSTNFCTSAKDAFVILVENALRVATINTVGDFML
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SCICCLWCLEKCLNYLNQNAYTATAINSTNFCTSAKDAFVILVENALRVATINTVGDFML
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB9 FLGKVLIVCSTGLAGIMLLNYQQDYTVWVLPLIIVCLFAFLVAHCFLSIYEMVVDVLFLC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FLGKVLIVCSTGLAGIMLLNYQQDYTVWVLPLIIVCLFAFLVAHCFLSIYEMVVDVLFLC
550 560 570 580 590 600
610 620 630 640 650
pF1KB9 FAIDTKYNDGSPGREFYMDKVLMEFVENSRKAMKEAGKGGVADSRELKPMASGASSA
::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FAIDTKYNDGSPGREFYMDKVLMEFVENSRKAMKEAGKGGVADSRELKPMIK
610 620 630 640 650
>>NP_001317660 (OMIM: 606105) choline transporter-like p (654 aa)
initn: 4339 init1: 4339 opt: 4339 Z-score: 5072.1 bits: 948.8 E(85289): 0
Smith-Waterman score: 4339; 100.0% identity (100.0% similar) in 650 aa overlap (1-650:1-650)
10 20 30 40 50 60
pF1KB9 MGCCSSASSAAQSSKREWKPLEDRSCTDIPWLLLFILFCIGMGFICGFSIATGAAARLVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MGCCSSASSAAQSSKREWKPLEDRSCTDIPWLLLFILFCIGMGFICGFSIATGAAARLVS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 GYDSYGNICGQKNTKLEAIPNSGMDHTQRKYVFFLDPCNLDLINRKIKSVALCVAACPRQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GYDSYGNICGQKNTKLEAIPNSGMDHTQRKYVFFLDPCNLDLINRKIKSVALCVAACPRQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 ELKTLSDVQKFAEINGSALCSYNLKPSEYTTSPKSSVLCPKLPVPASAPIPFFHRCAPVN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ELKTLSDVQKFAEINGSALCSYNLKPSEYTTSPKSSVLCPKLPVPASAPIPFFHRCAPVN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 ISCYAKFAEALITFVSDNSVLHRLISGVMTSKEIILGLCLLSLVLSMILMVIIRYISRVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ISCYAKFAEALITFVSDNSVLHRLISGVMTSKEIILGLCLLSLVLSMILMVIIRYISRVL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 VWILTILVILGSLGGTGVLWWLYAKQRRSPKETVTPEQLQIAEDNLRALLIYAISATVFT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VWILTILVILGSLGGTGVLWWLYAKQRRSPKETVTPEQLQIAEDNLRALLIYAISATVFT
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 VILFLIMLVMRKRVALTIALFHVAGKVFIHLPLLVFQPFWTFFALVLFWVYWIMTLLFLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VILFLIMLVMRKRVALTIALFHVAGKVFIHLPLLVFQPFWTFFALVLFWVYWIMTLLFLG
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 TTGSPVQNEQGFVEFKISGPLQYMWWYHVVGLIWISEFILACQQMTVAGAVVTYYFTRDK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TTGSPVQNEQGFVEFKISGPLQYMWWYHVVGLIWISEFILACQQMTVAGAVVTYYFTRDK
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB9 RNLPFTPILASVNRLIRYHLGTVAKGSFIITLVKIPRMILMYIHSQLKGKENACARCVLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RNLPFTPILASVNRLIRYHLGTVAKGSFIITLVKIPRMILMYIHSQLKGKENACARCVLK
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB9 SCICCLWCLEKCLNYLNQNAYTATAINSTNFCTSAKDAFVILVENALRVATINTVGDFML
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SCICCLWCLEKCLNYLNQNAYTATAINSTNFCTSAKDAFVILVENALRVATINTVGDFML
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB9 FLGKVLIVCSTGLAGIMLLNYQQDYTVWVLPLIIVCLFAFLVAHCFLSIYEMVVDVLFLC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FLGKVLIVCSTGLAGIMLLNYQQDYTVWVLPLIIVCLFAFLVAHCFLSIYEMVVDVLFLC
550 560 570 580 590 600
610 620 630 640 650
pF1KB9 FAIDTKYNDGSPGREFYMDKVLMEFVENSRKAMKEAGKGGVADSRELKPMASGASSA
::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FAIDTKYNDGSPGREFYMDKVLMEFVENSRKAMKEAGKGGVADSRELKPMLKKR
610 620 630 640 650
>>XP_006717091 (OMIM: 606105) PREDICTED: choline transpo (675 aa)
initn: 4302 init1: 4302 opt: 4302 Z-score: 5028.7 bits: 940.8 E(85289): 0
Smith-Waterman score: 4302; 99.1% identity (99.5% similar) in 653 aa overlap (5-657:23-675)
10 20 30 40
pF1KB9 MGCCSSASSAAQSSKREWKPLEDRSCTDIPWLLLFILFCIGM
::. . .::::::::::::::::::::::::::::::
XP_006 MLGSYIISWWMICVKLQLSEFHSSSRNLEDSSKREWKPLEDRSCTDIPWLLLFILFCIGM
10 20 30 40 50 60
50 60 70 80 90 100
pF1KB9 GFICGFSIATGAAARLVSGYDSYGNICGQKNTKLEAIPNSGMDHTQRKYVFFLDPCNLDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GFICGFSIATGAAARLVSGYDSYGNICGQKNTKLEAIPNSGMDHTQRKYVFFLDPCNLDL
70 80 90 100 110 120
110 120 130 140 150 160
pF1KB9 INRKIKSVALCVAACPRQELKTLSDVQKFAEINGSALCSYNLKPSEYTTSPKSSVLCPKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 INRKIKSVALCVAACPRQELKTLSDVQKFAEINGSALCSYNLKPSEYTTSPKSSVLCPKL
130 140 150 160 170 180
170 180 190 200 210 220
pF1KB9 PVPASAPIPFFHRCAPVNISCYAKFAEALITFVSDNSVLHRLISGVMTSKEIILGLCLLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PVPASAPIPFFHRCAPVNISCYAKFAEALITFVSDNSVLHRLISGVMTSKEIILGLCLLS
190 200 210 220 230 240
230 240 250 260 270 280
pF1KB9 LVLSMILMVIIRYISRVLVWILTILVILGSLGGTGVLWWLYAKQRRSPKETVTPEQLQIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LVLSMILMVIIRYISRVLVWILTILVILGSLGGTGVLWWLYAKQRRSPKETVTPEQLQIA
250 260 270 280 290 300
290 300 310 320 330 340
pF1KB9 EDNLRALLIYAISATVFTVILFLIMLVMRKRVALTIALFHVAGKVFIHLPLLVFQPFWTF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 EDNLRALLIYAISATVFTVILFLIMLVMRKRVALTIALFHVAGKVFIHLPLLVFQPFWTF
310 320 330 340 350 360
350 360 370 380 390 400
pF1KB9 FALVLFWVYWIMTLLFLGTTGSPVQNEQGFVEFKISGPLQYMWWYHVVGLIWISEFILAC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 FALVLFWVYWIMTLLFLGTTGSPVQNEQGFVEFKISGPLQYMWWYHVVGLIWISEFILAC
370 380 390 400 410 420
410 420 430 440 450 460
pF1KB9 QQMTVAGAVVTYYFTRDKRNLPFTPILASVNRLIRYHLGTVAKGSFIITLVKIPRMILMY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 QQMTVAGAVVTYYFTRDKRNLPFTPILASVNRLIRYHLGTVAKGSFIITLVKIPRMILMY
430 440 450 460 470 480
470 480 490 500 510 520
pF1KB9 IHSQLKGKENACARCVLKSCICCLWCLEKCLNYLNQNAYTATAINSTNFCTSAKDAFVIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 IHSQLKGKENACARCVLKSCICCLWCLEKCLNYLNQNAYTATAINSTNFCTSAKDAFVIL
490 500 510 520 530 540
530 540 550 560 570 580
pF1KB9 VENALRVATINTVGDFMLFLGKVLIVCSTGLAGIMLLNYQQDYTVWVLPLIIVCLFAFLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 VENALRVATINTVGDFMLFLGKVLIVCSTGLAGIMLLNYQQDYTVWVLPLIIVCLFAFLV
550 560 570 580 590 600
590 600 610 620 630 640
pF1KB9 AHCFLSIYEMVVDVLFLCFAIDTKYNDGSPGREFYMDKVLMEFVENSRKAMKEAGKGGVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 AHCFLSIYEMVVDVLFLCFAIDTKYNDGSPGREFYMDKVLMEFVENSRKAMKEAGKGGVA
610 620 630 640 650 660
650
pF1KB9 DSRELKPMASGASSA
:::::::::::::::
XP_006 DSRELKPMASGASSA
670
>>XP_006717090 (OMIM: 606105) PREDICTED: choline transpo (737 aa)
initn: 4299 init1: 4272 opt: 4272 Z-score: 4993.1 bits: 934.3 E(85289): 0
Smith-Waterman score: 4272; 98.8% identity (99.5% similar) in 649 aa overlap (5-653:23-671)
10 20 30 40
pF1KB9 MGCCSSASSAAQSSKREWKPLEDRSCTDIPWLLLFILFCIGM
::. . .::::::::::::::::::::::::::::::
XP_006 MLGSYIISWWMICVKLQLSEFHSSSRNLEDSSKREWKPLEDRSCTDIPWLLLFILFCIGM
10 20 30 40 50 60
50 60 70 80 90 100
pF1KB9 GFICGFSIATGAAARLVSGYDSYGNICGQKNTKLEAIPNSGMDHTQRKYVFFLDPCNLDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GFICGFSIATGAAARLVSGYDSYGNICGQKNTKLEAIPNSGMDHTQRKYVFFLDPCNLDL
70 80 90 100 110 120
110 120 130 140 150 160
pF1KB9 INRKIKSVALCVAACPRQELKTLSDVQKFAEINGSALCSYNLKPSEYTTSPKSSVLCPKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 INRKIKSVALCVAACPRQELKTLSDVQKFAEINGSALCSYNLKPSEYTTSPKSSVLCPKL
130 140 150 160 170 180
170 180 190 200 210 220
pF1KB9 PVPASAPIPFFHRCAPVNISCYAKFAEALITFVSDNSVLHRLISGVMTSKEIILGLCLLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PVPASAPIPFFHRCAPVNISCYAKFAEALITFVSDNSVLHRLISGVMTSKEIILGLCLLS
190 200 210 220 230 240
230 240 250 260 270 280
pF1KB9 LVLSMILMVIIRYISRVLVWILTILVILGSLGGTGVLWWLYAKQRRSPKETVTPEQLQIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LVLSMILMVIIRYISRVLVWILTILVILGSLGGTGVLWWLYAKQRRSPKETVTPEQLQIA
250 260 270 280 290 300
290 300 310 320 330 340
pF1KB9 EDNLRALLIYAISATVFTVILFLIMLVMRKRVALTIALFHVAGKVFIHLPLLVFQPFWTF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 EDNLRALLIYAISATVFTVILFLIMLVMRKRVALTIALFHVAGKVFIHLPLLVFQPFWTF
310 320 330 340 350 360
350 360 370 380 390 400
pF1KB9 FALVLFWVYWIMTLLFLGTTGSPVQNEQGFVEFKISGPLQYMWWYHVVGLIWISEFILAC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 FALVLFWVYWIMTLLFLGTTGSPVQNEQGFVEFKISGPLQYMWWYHVVGLIWISEFILAC
370 380 390 400 410 420
410 420 430 440 450 460
pF1KB9 QQMTVAGAVVTYYFTRDKRNLPFTPILASVNRLIRYHLGTVAKGSFIITLVKIPRMILMY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 QQMTVAGAVVTYYFTRDKRNLPFTPILASVNRLIRYHLGTVAKGSFIITLVKIPRMILMY
430 440 450 460 470 480
470 480 490 500 510 520
pF1KB9 IHSQLKGKENACARCVLKSCICCLWCLEKCLNYLNQNAYTATAINSTNFCTSAKDAFVIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 IHSQLKGKENACARCVLKSCICCLWCLEKCLNYLNQNAYTATAINSTNFCTSAKDAFVIL
490 500 510 520 530 540
530 540 550 560 570 580
pF1KB9 VENALRVATINTVGDFMLFLGKVLIVCSTGLAGIMLLNYQQDYTVWVLPLIIVCLFAFLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 VENALRVATINTVGDFMLFLGKVLIVCSTGLAGIMLLNYQQDYTVWVLPLIIVCLFAFLV
550 560 570 580 590 600
590 600 610 620 630 640
pF1KB9 AHCFLSIYEMVVDVLFLCFAIDTKYNDGSPGREFYMDKVLMEFVENSRKAMKEAGKGGVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 AHCFLSIYEMVVDVLFLCFAIDTKYNDGSPGREFYMDKVLMEFVENSRKAMKEAGKGGVA
610 620 630 640 650 660
650
pF1KB9 DSRELKPMASGASSA
::::::::..:
XP_006 DSRELKPMVGGDEEVAALQEFHFHFLSLSVFTDCTSSGEAFVICITQDMLLFLFVCLPIT
670 680 690 700 710 720
>>XP_006717092 (OMIM: 606105) PREDICTED: choline transpo (672 aa)
initn: 4264 init1: 4264 opt: 4264 Z-score: 4984.3 bits: 932.6 E(85289): 0
Smith-Waterman score: 4264; 99.1% identity (99.5% similar) in 646 aa overlap (5-650:23-668)
10 20 30 40
pF1KB9 MGCCSSASSAAQSSKREWKPLEDRSCTDIPWLLLFILFCIGM
::. . .::::::::::::::::::::::::::::::
XP_006 MLGSYIISWWMICVKLQLSEFHSSSRNLEDSSKREWKPLEDRSCTDIPWLLLFILFCIGM
10 20 30 40 50 60
50 60 70 80 90 100
pF1KB9 GFICGFSIATGAAARLVSGYDSYGNICGQKNTKLEAIPNSGMDHTQRKYVFFLDPCNLDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GFICGFSIATGAAARLVSGYDSYGNICGQKNTKLEAIPNSGMDHTQRKYVFFLDPCNLDL
70 80 90 100 110 120
110 120 130 140 150 160
pF1KB9 INRKIKSVALCVAACPRQELKTLSDVQKFAEINGSALCSYNLKPSEYTTSPKSSVLCPKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 INRKIKSVALCVAACPRQELKTLSDVQKFAEINGSALCSYNLKPSEYTTSPKSSVLCPKL
130 140 150 160 170 180
170 180 190 200 210 220
pF1KB9 PVPASAPIPFFHRCAPVNISCYAKFAEALITFVSDNSVLHRLISGVMTSKEIILGLCLLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PVPASAPIPFFHRCAPVNISCYAKFAEALITFVSDNSVLHRLISGVMTSKEIILGLCLLS
190 200 210 220 230 240
230 240 250 260 270 280
pF1KB9 LVLSMILMVIIRYISRVLVWILTILVILGSLGGTGVLWWLYAKQRRSPKETVTPEQLQIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LVLSMILMVIIRYISRVLVWILTILVILGSLGGTGVLWWLYAKQRRSPKETVTPEQLQIA
250 260 270 280 290 300
290 300 310 320 330 340
pF1KB9 EDNLRALLIYAISATVFTVILFLIMLVMRKRVALTIALFHVAGKVFIHLPLLVFQPFWTF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 EDNLRALLIYAISATVFTVILFLIMLVMRKRVALTIALFHVAGKVFIHLPLLVFQPFWTF
310 320 330 340 350 360
350 360 370 380 390 400
pF1KB9 FALVLFWVYWIMTLLFLGTTGSPVQNEQGFVEFKISGPLQYMWWYHVVGLIWISEFILAC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 FALVLFWVYWIMTLLFLGTTGSPVQNEQGFVEFKISGPLQYMWWYHVVGLIWISEFILAC
370 380 390 400 410 420
410 420 430 440 450 460
pF1KB9 QQMTVAGAVVTYYFTRDKRNLPFTPILASVNRLIRYHLGTVAKGSFIITLVKIPRMILMY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 QQMTVAGAVVTYYFTRDKRNLPFTPILASVNRLIRYHLGTVAKGSFIITLVKIPRMILMY
430 440 450 460 470 480
470 480 490 500 510 520
pF1KB9 IHSQLKGKENACARCVLKSCICCLWCLEKCLNYLNQNAYTATAINSTNFCTSAKDAFVIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 IHSQLKGKENACARCVLKSCICCLWCLEKCLNYLNQNAYTATAINSTNFCTSAKDAFVIL
490 500 510 520 530 540
530 540 550 560 570 580
pF1KB9 VENALRVATINTVGDFMLFLGKVLIVCSTGLAGIMLLNYQQDYTVWVLPLIIVCLFAFLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 VENALRVATINTVGDFMLFLGKVLIVCSTGLAGIMLLNYQQDYTVWVLPLIIVCLFAFLV
550 560 570 580 590 600
590 600 610 620 630 640
pF1KB9 AHCFLSIYEMVVDVLFLCFAIDTKYNDGSPGREFYMDKVLMEFVENSRKAMKEAGKGGVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 AHCFLSIYEMVVDVLFLCFAIDTKYNDGSPGREFYMDKVLMEFVENSRKAMKEAGKGGVA
610 620 630 640 650 660
650
pF1KB9 DSRELKPMASGASSA
::::::::
XP_006 DSRELKPMLKKR
670
>>XP_016870049 (OMIM: 606105) PREDICTED: choline transpo (624 aa)
initn: 4073 init1: 4073 opt: 4078 Z-score: 4767.2 bits: 892.3 E(85289): 0
Smith-Waterman score: 4078; 99.5% identity (99.5% similar) in 619 aa overlap (39-657:6-624)
10 20 30 40 50 60
pF1KB9 SAAQSSKREWKPLEDRSCTDIPWLLLFILFCIGMGFICGFSIATGAAARLVSGYDSYGNI
: ::::::::::::::::::::::::::
XP_016 MEEQSCWYKGFICGFSIATGAAARLVSGYDSYGNI
10 20 30
70 80 90 100 110 120
pF1KB9 CGQKNTKLEAIPNSGMDHTQRKYVFFLDPCNLDLINRKIKSVALCVAACPRQELKTLSDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CGQKNTKLEAIPNSGMDHTQRKYVFFLDPCNLDLINRKIKSVALCVAACPRQELKTLSDV
40 50 60 70 80 90
130 140 150 160 170 180
pF1KB9 QKFAEINGSALCSYNLKPSEYTTSPKSSVLCPKLPVPASAPIPFFHRCAPVNISCYAKFA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QKFAEINGSALCSYNLKPSEYTTSPKSSVLCPKLPVPASAPIPFFHRCAPVNISCYAKFA
100 110 120 130 140 150
190 200 210 220 230 240
pF1KB9 EALITFVSDNSVLHRLISGVMTSKEIILGLCLLSLVLSMILMVIIRYISRVLVWILTILV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EALITFVSDNSVLHRLISGVMTSKEIILGLCLLSLVLSMILMVIIRYISRVLVWILTILV
160 170 180 190 200 210
250 260 270 280 290 300
pF1KB9 ILGSLGGTGVLWWLYAKQRRSPKETVTPEQLQIAEDNLRALLIYAISATVFTVILFLIML
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ILGSLGGTGVLWWLYAKQRRSPKETVTPEQLQIAEDNLRALLIYAISATVFTVILFLIML
220 230 240 250 260 270
310 320 330 340 350 360
pF1KB9 VMRKRVALTIALFHVAGKVFIHLPLLVFQPFWTFFALVLFWVYWIMTLLFLGTTGSPVQN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VMRKRVALTIALFHVAGKVFIHLPLLVFQPFWTFFALVLFWVYWIMTLLFLGTTGSPVQN
280 290 300 310 320 330
370 380 390 400 410 420
pF1KB9 EQGFVEFKISGPLQYMWWYHVVGLIWISEFILACQQMTVAGAVVTYYFTRDKRNLPFTPI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EQGFVEFKISGPLQYMWWYHVVGLIWISEFILACQQMTVAGAVVTYYFTRDKRNLPFTPI
340 350 360 370 380 390
430 440 450 460 470 480
pF1KB9 LASVNRLIRYHLGTVAKGSFIITLVKIPRMILMYIHSQLKGKENACARCVLKSCICCLWC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LASVNRLIRYHLGTVAKGSFIITLVKIPRMILMYIHSQLKGKENACARCVLKSCICCLWC
400 410 420 430 440 450
490 500 510 520 530 540
pF1KB9 LEKCLNYLNQNAYTATAINSTNFCTSAKDAFVILVENALRVATINTVGDFMLFLGKVLIV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LEKCLNYLNQNAYTATAINSTNFCTSAKDAFVILVENALRVATINTVGDFMLFLGKVLIV
460 470 480 490 500 510
550 560 570 580 590 600
pF1KB9 CSTGLAGIMLLNYQQDYTVWVLPLIIVCLFAFLVAHCFLSIYEMVVDVLFLCFAIDTKYN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CSTGLAGIMLLNYQQDYTVWVLPLIIVCLFAFLVAHCFLSIYEMVVDVLFLCFAIDTKYN
520 530 540 550 560 570
610 620 630 640 650
pF1KB9 DGSPGREFYMDKVLMEFVENSRKAMKEAGKGGVADSRELKPMASGASSA
:::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DGSPGREFYMDKVLMEFVENSRKAMKEAGKGGVADSRELKPMASGASSA
580 590 600 610 620
>>NP_001138528 (OMIM: 606106) choline transporter-like p (704 aa)
initn: 956 init1: 448 opt: 689 Z-score: 803.5 bits: 159.1 E(85289): 5.1e-38
Smith-Waterman score: 958; 29.2% identity (60.1% similar) in 695 aa overlap (26-636:29-704)
10 20 30 40 50
pF1KB9 MGCCSSASSAAQSSKREWKPLEDRSCTDIPWLLLFILFCIGMGFICGFSIATGAAAR
:::: ....: .:. . .. . : .
NP_001 MEDERKNGAYGTPQKYDPTFKGPIYNRGCTDIICCVFLLLAIVGYVAVGIIAWTHGDPRK
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB9 LVSGYDSYGNICGQKNTKLEAIPNSGMDHTQRKYVFFLD--PCN--LDLINRKIKSVALC
.. :: :..::::.:: : : :.:... : : :.. . . .:
NP_001 VIYPTDSRGEFCGQKGTKNENKP----------YLFYFNIVKCASPLVLLEFQCPTPQIC
70 80 90 100 110
120 130 140 150 160 170
pF1KB9 VAACPRQELKTLSDVQKFAEINGSALCSYNLKPSEYTTSPKSSVLCPKLPVPASAPIPFF
: :: . : :. .. . .: ..: .. .. .. :: . .:.. :.
NP_001 VEKCPDRYLTYLNARSSRDFEYYKQFCVPGFKNNKGVAEVLQDGDCPAVLIPSK---PLA
120 130 140 150 160
180 190 200 210
pF1KB9 HRCAPVNISCYAK--FAEALITF---------VSDNSVLHRLISGVMTSKE---------
.:: :. : : .. :. ..: . .::. ...
NP_001 RRCFPA-IHAYKGVLMVGNETTYEDGHGSRKNITDLVEGAKKANGVLEARQLAMRIFEDY
170 180 190 200 210 220
220 230 240 250 260
pF1KB9 ------IILGLCLLSLVLSMILMVIIRYISRVLVWILTILVILGSLGGTGVL--WWLYAK
::.:: ......:.......:... ..::.. :.::: . : :.. . :..
NP_001 TVSWYWIIIGL-VIAMAMSLLFIILLRFLAGIMVWVMIIMVIL--VLGYGIFHCYMEYSR
230 240 250 260 270 280
270 280 290 300 310
pF1KB9 QRRSPKETVTPEQLQIAED-----NLRAL-LIYAISATVFTVILFLIMLVMRKRVALTIA
: :. .: . : .:: : . : ... ::..:... .:::. ..::
NP_001 LRGEAGSDVSLVDLGFQTDFRVYLHLRQTWLAFMIILSILEVIIILLLIFLRKRILIAIA
290 300 310 320 330 340
320 330 340 350 360 370
pF1KB9 LFHVAGKVFIHLPLLVFQPFWTFFALVLFWVYWIMTLLFLGTTGSPVQN--EQGFVEF--
:.. :... .. .. :. ::: : : .:: : .::.:.. : . ... :
NP_001 LIKEASRAVGYVMCSLLYPLVTFFLLCLCIAYWASTAVFLSTSNEAVYKIFDDSPCPFTA
350 360 370 380 390 400
380 390 400
pF1KB9 KISGP----------------LQYMWW-----YH--VVGL--------IWISEFILACQQ
: .: :. .. :: ..:: .:...:.:: :
NP_001 KTCNPETFPSSNESRQCPNARCQFAFYGGESGYHRALLGLQIFNAFMFFWLANFVLALGQ
410 420 430 440 450 460
410 420 430 440 450 460
pF1KB9 MTVAGAVVTYYFT-RDKRNLPFTPILASVNRLIRYHLGTVAKGSFIITLVKIPRMILMYI
.:.::: ..::.. : .:: :.... .: .::: :..: :..:...:.: :.:: :.
NP_001 VTLAGAFASYYWALRKPDDLPAFPLFSAFGRALRYHTGSLAFGALILAIVQIIRVILEYL
470 480 490 500 510 520
470 480 490 500 510 520
pF1KB9 HSQLKGKENACARCVLKSCI-CCLWCLEKCLNYLNQNAYTATAINSTNFCTSAKDAFVIL
..::. :: :.:.. .:. ::.::::: ...::.::: :: .:::::::..:: .:
NP_001 DQRLKAAENKFAKCLM-TCLKCCFWCLEKFIKFLNRNAYIMIAIYGTNFCTSARNAFFLL
530 540 550 560 570 580
530 540 550 560 570
pF1KB9 VENALRVATINTVGDFMLFLGKVLIVCSTGLAGIMLLNYQ----QDYT-----VWVLPLI
..: .:::... : ::...:::.::: :.:. ........ :: . :: :..
NP_001 MRNIIRVAVLDKVTDFLFLLGKLLIVGSVGILAFFFFTHRIRIVQDTAPPLNYYWV-PIL
590 600 610 620 630 640
580 590 600 610 620 630
pF1KB9 IVCLFAFLVAHCFLSIYEMVVDVLFLCFAIDTKYNDGSPGREFYMDKVLMEFVENSRKAM
: . ..:.:: :.:.: : ::.::::: : . :::: : ..:...: ...... :
NP_001 TVIVGSYLIAHGFFSVYGMCVDTLFLCFLEDLERNDGSAERPYFMSSTLKKLLNKTNKKA
650 660 670 680 690 700
640 650
pF1KB9 KEAGKGGVADSRELKPMASGASSA
:.
NP_001 AES
>>NP_065161 (OMIM: 606106) choline transporter-like prot (706 aa)
initn: 956 init1: 448 opt: 689 Z-score: 803.5 bits: 159.1 E(85289): 5.1e-38
Smith-Waterman score: 958; 29.2% identity (60.1% similar) in 695 aa overlap (26-636:31-706)
10 20 30 40 50
pF1KB9 MGCCSSASSAAQSSKREWKPLEDRSCTDIPWLLLFILFCIGMGFICGFSIATGAA
:::: ....: .:. . .. . :
NP_065 MGDERPHYYGKHGTPQKYDPTFKGPIYNRGCTDIICCVFLLLAIVGYVAVGIIAWTHGDP
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB9 ARLVSGYDSYGNICGQKNTKLEAIPNSGMDHTQRKYVFFLD--PCN--LDLINRKIKSVA
... :: :..::::.:: : : :.:... : : :.. . .
NP_065 RKVIYPTDSRGEFCGQKGTKNENKP----------YLFYFNIVKCASPLVLLEFQCPTPQ
70 80 90 100 110
120 130 140 150 160 170
pF1KB9 LCVAACPRQELKTLSDVQKFAEINGSALCSYNLKPSEYTTSPKSSVLCPKLPVPASAPIP
.:: :: . : :. .. . .: ..: .. .. .. :: . .:.. :
NP_065 ICVEKCPDRYLTYLNARSSRDFEYYKQFCVPGFKNNKGVAEVLQDGDCPAVLIPSK---P
120 130 140 150 160
180 190 200 210
pF1KB9 FFHRCAPVNISCYAK--FAEALITF---------VSDNSVLHRLISGVMTSKE-------
. .:: :. : : .. :. ..: . .::. ...
NP_065 LARRCFPA-IHAYKGVLMVGNETTYEDGHGSRKNITDLVEGAKKANGVLEARQLAMRIFE
170 180 190 200 210 220
220 230 240 250 260
pF1KB9 --------IILGLCLLSLVLSMILMVIIRYISRVLVWILTILVILGSLGGTGVL--WWLY
::.:: ......:.......:... ..::.. :.::: . : :.. . :
NP_065 DYTVSWYWIIIGL-VIAMAMSLLFIILLRFLAGIMVWVMIIMVIL--VLGYGIFHCYMEY
230 240 250 260 270 280
270 280 290 300 310
pF1KB9 AKQRRSPKETVTPEQLQIAED-----NLRAL-LIYAISATVFTVILFLIMLVMRKRVALT
.. : :. .: . : .:: : . : ... ::..:... .:::. ..
NP_065 SRLRGEAGSDVSLVDLGFQTDFRVYLHLRQTWLAFMIILSILEVIIILLLIFLRKRILIA
290 300 310 320 330 340
320 330 340 350 360 370
pF1KB9 IALFHVAGKVFIHLPLLVFQPFWTFFALVLFWVYWIMTLLFLGTTGSPVQN--EQGFVEF
:::.. :... .. .. :. ::: : : .:: : .::.:.. : . ... :
NP_065 IALIKEASRAVGYVMCSLLYPLVTFFLLCLCIAYWASTAVFLSTSNEAVYKIFDDSPCPF
350 360 370 380 390 400
380 390 400
pF1KB9 --KISGP----------------LQYMWW-----YH--VVGL--------IWISEFILAC
: .: :. .. :: ..:: .:...:.::
NP_065 TAKTCNPETFPSSNESRQCPNARCQFAFYGGESGYHRALLGLQIFNAFMFFWLANFVLAL
410 420 430 440 450 460
410 420 430 440 450 460
pF1KB9 QQMTVAGAVVTYYFT-RDKRNLPFTPILASVNRLIRYHLGTVAKGSFIITLVKIPRMILM
:.:.::: ..::.. : .:: :.... .: .::: :..: :..:...:.: :.::
NP_065 GQVTLAGAFASYYWALRKPDDLPAFPLFSAFGRALRYHTGSLAFGALILAIVQIIRVILE
470 480 490 500 510 520
470 480 490 500 510 520
pF1KB9 YIHSQLKGKENACARCVLKSCI-CCLWCLEKCLNYLNQNAYTATAINSTNFCTSAKDAFV
:. ..::. :: :.:.. .:. ::.::::: ...::.::: :: .:::::::..::
NP_065 YLDQRLKAAENKFAKCLM-TCLKCCFWCLEKFIKFLNRNAYIMIAIYGTNFCTSARNAFF
530 540 550 560 570 580
530 540 550 560 570
pF1KB9 ILVENALRVATINTVGDFMLFLGKVLIVCSTGLAGIMLLNYQ----QDYT-----VWVLP
.:..: .:::... : ::...:::.::: :.:. ........ :: . :: :
NP_065 LLMRNIIRVAVLDKVTDFLFLLGKLLIVGSVGILAFFFFTHRIRIVQDTAPPLNYYWV-P
590 600 610 620 630 640
580 590 600 610 620 630
pF1KB9 LIIVCLFAFLVAHCFLSIYEMVVDVLFLCFAIDTKYNDGSPGREFYMDKVLMEFVENSRK
.. : . ..:.:: :.:.: : ::.::::: : . :::: : ..:...: ...... :
NP_065 ILTVIVGSYLIAHGFFSVYGMCVDTLFLCFLEDLERNDGSAERPYFMSSTLKKLLNKTNK
650 660 670 680 690 700
640 650
pF1KB9 AMKEAGKGGVADSRELKPMASGASSA
:.
NP_065 KAAES
657 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 09:27:38 2016 done: Fri Nov 4 09:27:39 2016
Total Scan time: 7.490 Total Display time: 0.150
Function used was FASTA [36.3.4 Apr, 2011]