Result of FASTA (omim) for
pFN21AB6546
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6546, 392 aa
1>>>pF1KB6546 392 - 392 aa - 392 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.7581+/-0.000392; mu= 5.7610+/- 0.024
mean_var=171.9058+/-35.394, 0's: 0 Z-trim(117.2): 61 B-trim: 277 in 2/49
Lambda= 0.097820
statistics sampled from 28985 (29046) to 28985 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.705), E-opt: 0.2 (0.341), width: 16
Scan time: 8.530
The best scores are: opt bits E(85289)
NP_071906 (OMIM: 609916) 5-azacytidine-induced pro ( 392) 2586 377.2 3.7e-104
XP_005265449 (OMIM: 609916) PREDICTED: 5-azacytidi ( 392) 2586 377.2 3.7e-104
XP_011532311 (OMIM: 609916) PREDICTED: 5-azacytidi ( 395) 2586 377.2 3.7e-104
NP_001258579 (OMIM: 609916) 5-azacytidine-induced ( 280) 1874 276.6 5e-74
NP_001127904 (OMIM: 609916) 5-azacytidine-induced ( 243) 1381 207.0 4e-53
XP_011532312 (OMIM: 609916) PREDICTED: 5-azacytidi ( 246) 1381 207.0 4e-53
NP_001127905 (OMIM: 609916) 5-azacytidine-induced ( 232) 1370 205.4 1.1e-52
XP_011532313 (OMIM: 609916) PREDICTED: 5-azacytidi ( 235) 1370 205.4 1.1e-52
XP_016880921 (OMIM: 608476) PREDICTED: TANK-bindin ( 613) 208 41.8 0.0054
XP_016880920 (OMIM: 608476) PREDICTED: TANK-bindin ( 614) 205 41.4 0.0073
XP_005257916 (OMIM: 608476) PREDICTED: TANK-bindin ( 615) 205 41.4 0.0073
XP_005257917 (OMIM: 608476) PREDICTED: TANK-bindin ( 615) 205 41.4 0.0073
XP_005257919 (OMIM: 608476) PREDICTED: TANK-bindin ( 615) 205 41.4 0.0073
XP_005257918 (OMIM: 608476) PREDICTED: TANK-bindin ( 615) 205 41.4 0.0073
NP_055541 (OMIM: 608476) TANK-binding kinase 1-bin ( 615) 205 41.4 0.0073
>>NP_071906 (OMIM: 609916) 5-azacytidine-induced protein (392 aa)
initn: 2586 init1: 2586 opt: 2586 Z-score: 1991.0 bits: 377.2 E(85289): 3.7e-104
Smith-Waterman score: 2586; 100.0% identity (100.0% similar) in 392 aa overlap (1-392:1-392)
10 20 30 40 50 60
pF1KB6 MDALVEDDICILNHEKAHKRDTVTPVSIYSGDESVASHFALVTAYEDIKKRLKDSEKENS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_071 MDALVEDDICILNHEKAHKRDTVTPVSIYSGDESVASHFALVTAYEDIKKRLKDSEKENS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 LLKKRIRFLEEKLIARFEEETSSVGREQVNKAYHAYREVCIDRDNLKSKLDKMNKDNSES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_071 LLKKRIRFLEEKLIARFEEETSSVGREQVNKAYHAYREVCIDRDNLKSKLDKMNKDNSES
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 LKVLNEQLQSKEVELLQLRTEVETQQVMRNLNPPSSNWEVEKLSCDLKIHGLEQELELMR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_071 LKVLNEQLQSKEVELLQLRTEVETQQVMRNLNPPSSNWEVEKLSCDLKIHGLEQELELMR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 KECSDLKIELQKAKQTDPYQEDNLKSRDLQKLSISSDNMQHAYWELKREMSNLHLVTQVQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_071 KECSDLKIELQKAKQTDPYQEDNLKSRDLQKLSISSDNMQHAYWELKREMSNLHLVTQVQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 AELLRKLKTSTAIKKACAPVGCSEDLGRDSTKLHLMNFTATYTRHPPLLPNGKALCHTTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_071 AELLRKLKTSTAIKKACAPVGCSEDLGRDSTKLHLMNFTATYTRHPPLLPNGKALCHTTS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 SPLPGDVKVLSEKAILQSWTDNERSIPNDGTCFQEHSSYGRNSLEDNSWVFPSPPKSSET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_071 SPLPGDVKVLSEKAILQSWTDNERSIPNDGTCFQEHSSYGRNSLEDNSWVFPSPPKSSET
310 320 330 340 350 360
370 380 390
pF1KB6 AFGETKTKTLPLPNLPPLHYLDQHNQNCLYKN
::::::::::::::::::::::::::::::::
NP_071 AFGETKTKTLPLPNLPPLHYLDQHNQNCLYKN
370 380 390
>>XP_005265449 (OMIM: 609916) PREDICTED: 5-azacytidine-i (392 aa)
initn: 2586 init1: 2586 opt: 2586 Z-score: 1991.0 bits: 377.2 E(85289): 3.7e-104
Smith-Waterman score: 2586; 100.0% identity (100.0% similar) in 392 aa overlap (1-392:1-392)
10 20 30 40 50 60
pF1KB6 MDALVEDDICILNHEKAHKRDTVTPVSIYSGDESVASHFALVTAYEDIKKRLKDSEKENS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MDALVEDDICILNHEKAHKRDTVTPVSIYSGDESVASHFALVTAYEDIKKRLKDSEKENS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 LLKKRIRFLEEKLIARFEEETSSVGREQVNKAYHAYREVCIDRDNLKSKLDKMNKDNSES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LLKKRIRFLEEKLIARFEEETSSVGREQVNKAYHAYREVCIDRDNLKSKLDKMNKDNSES
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 LKVLNEQLQSKEVELLQLRTEVETQQVMRNLNPPSSNWEVEKLSCDLKIHGLEQELELMR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LKVLNEQLQSKEVELLQLRTEVETQQVMRNLNPPSSNWEVEKLSCDLKIHGLEQELELMR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 KECSDLKIELQKAKQTDPYQEDNLKSRDLQKLSISSDNMQHAYWELKREMSNLHLVTQVQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KECSDLKIELQKAKQTDPYQEDNLKSRDLQKLSISSDNMQHAYWELKREMSNLHLVTQVQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 AELLRKLKTSTAIKKACAPVGCSEDLGRDSTKLHLMNFTATYTRHPPLLPNGKALCHTTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 AELLRKLKTSTAIKKACAPVGCSEDLGRDSTKLHLMNFTATYTRHPPLLPNGKALCHTTS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 SPLPGDVKVLSEKAILQSWTDNERSIPNDGTCFQEHSSYGRNSLEDNSWVFPSPPKSSET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SPLPGDVKVLSEKAILQSWTDNERSIPNDGTCFQEHSSYGRNSLEDNSWVFPSPPKSSET
310 320 330 340 350 360
370 380 390
pF1KB6 AFGETKTKTLPLPNLPPLHYLDQHNQNCLYKN
::::::::::::::::::::::::::::::::
XP_005 AFGETKTKTLPLPNLPPLHYLDQHNQNCLYKN
370 380 390
>>XP_011532311 (OMIM: 609916) PREDICTED: 5-azacytidine-i (395 aa)
initn: 2586 init1: 2586 opt: 2586 Z-score: 1991.0 bits: 377.2 E(85289): 3.7e-104
Smith-Waterman score: 2586; 100.0% identity (100.0% similar) in 392 aa overlap (1-392:4-395)
10 20 30 40 50
pF1KB6 MDALVEDDICILNHEKAHKRDTVTPVSIYSGDESVASHFALVTAYEDIKKRLKDSEK
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MVVMDALVEDDICILNHEKAHKRDTVTPVSIYSGDESVASHFALVTAYEDIKKRLKDSEK
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB6 ENSLLKKRIRFLEEKLIARFEEETSSVGREQVNKAYHAYREVCIDRDNLKSKLDKMNKDN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ENSLLKKRIRFLEEKLIARFEEETSSVGREQVNKAYHAYREVCIDRDNLKSKLDKMNKDN
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB6 SESLKVLNEQLQSKEVELLQLRTEVETQQVMRNLNPPSSNWEVEKLSCDLKIHGLEQELE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SESLKVLNEQLQSKEVELLQLRTEVETQQVMRNLNPPSSNWEVEKLSCDLKIHGLEQELE
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB6 LMRKECSDLKIELQKAKQTDPYQEDNLKSRDLQKLSISSDNMQHAYWELKREMSNLHLVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LMRKECSDLKIELQKAKQTDPYQEDNLKSRDLQKLSISSDNMQHAYWELKREMSNLHLVT
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB6 QVQAELLRKLKTSTAIKKACAPVGCSEDLGRDSTKLHLMNFTATYTRHPPLLPNGKALCH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QVQAELLRKLKTSTAIKKACAPVGCSEDLGRDSTKLHLMNFTATYTRHPPLLPNGKALCH
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB6 TTSSPLPGDVKVLSEKAILQSWTDNERSIPNDGTCFQEHSSYGRNSLEDNSWVFPSPPKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TTSSPLPGDVKVLSEKAILQSWTDNERSIPNDGTCFQEHSSYGRNSLEDNSWVFPSPPKS
310 320 330 340 350 360
360 370 380 390
pF1KB6 SETAFGETKTKTLPLPNLPPLHYLDQHNQNCLYKN
:::::::::::::::::::::::::::::::::::
XP_011 SETAFGETKTKTLPLPNLPPLHYLDQHNQNCLYKN
370 380 390
>>NP_001258579 (OMIM: 609916) 5-azacytidine-induced prot (280 aa)
initn: 1874 init1: 1874 opt: 1874 Z-score: 1450.0 bits: 276.6 E(85289): 5e-74
Smith-Waterman score: 1874; 100.0% identity (100.0% similar) in 280 aa overlap (113-392:1-280)
90 100 110 120 130 140
pF1KB6 SVGREQVNKAYHAYREVCIDRDNLKSKLDKMNKDNSESLKVLNEQLQSKEVELLQLRTEV
::::::::::::::::::::::::::::::
NP_001 MNKDNSESLKVLNEQLQSKEVELLQLRTEV
10 20 30
150 160 170 180 190 200
pF1KB6 ETQQVMRNLNPPSSNWEVEKLSCDLKIHGLEQELELMRKECSDLKIELQKAKQTDPYQED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ETQQVMRNLNPPSSNWEVEKLSCDLKIHGLEQELELMRKECSDLKIELQKAKQTDPYQED
40 50 60 70 80 90
210 220 230 240 250 260
pF1KB6 NLKSRDLQKLSISSDNMQHAYWELKREMSNLHLVTQVQAELLRKLKTSTAIKKACAPVGC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NLKSRDLQKLSISSDNMQHAYWELKREMSNLHLVTQVQAELLRKLKTSTAIKKACAPVGC
100 110 120 130 140 150
270 280 290 300 310 320
pF1KB6 SEDLGRDSTKLHLMNFTATYTRHPPLLPNGKALCHTTSSPLPGDVKVLSEKAILQSWTDN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SEDLGRDSTKLHLMNFTATYTRHPPLLPNGKALCHTTSSPLPGDVKVLSEKAILQSWTDN
160 170 180 190 200 210
330 340 350 360 370 380
pF1KB6 ERSIPNDGTCFQEHSSYGRNSLEDNSWVFPSPPKSSETAFGETKTKTLPLPNLPPLHYLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ERSIPNDGTCFQEHSSYGRNSLEDNSWVFPSPPKSSETAFGETKTKTLPLPNLPPLHYLD
220 230 240 250 260 270
390
pF1KB6 QHNQNCLYKN
::::::::::
NP_001 QHNQNCLYKN
280
>>NP_001127904 (OMIM: 609916) 5-azacytidine-induced prot (243 aa)
initn: 1412 init1: 1372 opt: 1381 Z-score: 1074.8 bits: 207.0 E(85289): 4e-53
Smith-Waterman score: 1381; 96.4% identity (98.2% similar) in 224 aa overlap (1-224:1-224)
10 20 30 40 50 60
pF1KB6 MDALVEDDICILNHEKAHKRDTVTPVSIYSGDESVASHFALVTAYEDIKKRLKDSEKENS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MDALVEDDICILNHEKAHKRDTVTPVSIYSGDESVASHFALVTAYEDIKKRLKDSEKENS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 LLKKRIRFLEEKLIARFEEETSSVGREQVNKAYHAYREVCIDRDNLKSKLDKMNKDNSES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LLKKRIRFLEEKLIARFEEETSSVGREQVNKAYHAYREVCIDRDNLKSKLDKMNKDNSES
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 LKVLNEQLQSKEVELLQLRTEVETQQVMRNLNPPSSNWEVEKLSCDLKIHGLEQELELMR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LKVLNEQLQSKEVELLQLRTEVETQQVMRNLNPPSSNWEVEKLSCDLKIHGLEQELELMR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 KECSDLKIELQKAKQTDPYQEDNLKSRDLQKLSISSDNMQHAYWELKREMSNLHLVTQVQ
::::::::::::::::::::::::::::::::::: ... . :
NP_001 KECSDLKIELQKAKQTDPYQEDNLKSRDLQKLSISRQSICSTAWSAVAQSWDSMNFEDCS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 AELLRKLKTSTAIKKACAPVGCSEDLGRDSTKLHLMNFTATYTRHPPLLPNGKALCHTTS
NP_001 LFA
>>XP_011532312 (OMIM: 609916) PREDICTED: 5-azacytidine-i (246 aa)
initn: 1412 init1: 1372 opt: 1381 Z-score: 1074.7 bits: 207.0 E(85289): 4e-53
Smith-Waterman score: 1381; 96.4% identity (98.2% similar) in 224 aa overlap (1-224:4-227)
10 20 30 40 50
pF1KB6 MDALVEDDICILNHEKAHKRDTVTPVSIYSGDESVASHFALVTAYEDIKKRLKDSEK
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MVVMDALVEDDICILNHEKAHKRDTVTPVSIYSGDESVASHFALVTAYEDIKKRLKDSEK
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB6 ENSLLKKRIRFLEEKLIARFEEETSSVGREQVNKAYHAYREVCIDRDNLKSKLDKMNKDN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ENSLLKKRIRFLEEKLIARFEEETSSVGREQVNKAYHAYREVCIDRDNLKSKLDKMNKDN
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB6 SESLKVLNEQLQSKEVELLQLRTEVETQQVMRNLNPPSSNWEVEKLSCDLKIHGLEQELE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SESLKVLNEQLQSKEVELLQLRTEVETQQVMRNLNPPSSNWEVEKLSCDLKIHGLEQELE
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB6 LMRKECSDLKIELQKAKQTDPYQEDNLKSRDLQKLSISSDNMQHAYWELKREMSNLHLVT
:::::::::::::::::::::::::::::::::::::: ... . :
XP_011 LMRKECSDLKIELQKAKQTDPYQEDNLKSRDLQKLSISRQSICSTAWSAVAQSWDSMNFE
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB6 QVQAELLRKLKTSTAIKKACAPVGCSEDLGRDSTKLHLMNFTATYTRHPPLLPNGKALCH
XP_011 DCSLFA
>>NP_001127905 (OMIM: 609916) 5-azacytidine-induced prot (232 aa)
initn: 1370 init1: 1370 opt: 1370 Z-score: 1066.7 bits: 205.4 E(85289): 1.1e-52
Smith-Waterman score: 1370; 100.0% identity (100.0% similar) in 215 aa overlap (1-215:1-215)
10 20 30 40 50 60
pF1KB6 MDALVEDDICILNHEKAHKRDTVTPVSIYSGDESVASHFALVTAYEDIKKRLKDSEKENS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MDALVEDDICILNHEKAHKRDTVTPVSIYSGDESVASHFALVTAYEDIKKRLKDSEKENS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 LLKKRIRFLEEKLIARFEEETSSVGREQVNKAYHAYREVCIDRDNLKSKLDKMNKDNSES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LLKKRIRFLEEKLIARFEEETSSVGREQVNKAYHAYREVCIDRDNLKSKLDKMNKDNSES
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 LKVLNEQLQSKEVELLQLRTEVETQQVMRNLNPPSSNWEVEKLSCDLKIHGLEQELELMR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LKVLNEQLQSKEVELLQLRTEVETQQVMRNLNPPSSNWEVEKLSCDLKIHGLEQELELMR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 KECSDLKIELQKAKQTDPYQEDNLKSRDLQKLSISSDNMQHAYWELKREMSNLHLVTQVQ
:::::::::::::::::::::::::::::::::::
NP_001 KECSDLKIELQKAKQTDPYQEDNLKSRDLQKLSISRVSVAQPGVQWRNHGIA
190 200 210 220 230
250 260 270 280 290 300
pF1KB6 AELLRKLKTSTAIKKACAPVGCSEDLGRDSTKLHLMNFTATYTRHPPLLPNGKALCHTTS
>>XP_011532313 (OMIM: 609916) PREDICTED: 5-azacytidine-i (235 aa)
initn: 1370 init1: 1370 opt: 1370 Z-score: 1066.6 bits: 205.4 E(85289): 1.1e-52
Smith-Waterman score: 1370; 100.0% identity (100.0% similar) in 215 aa overlap (1-215:4-218)
10 20 30 40 50
pF1KB6 MDALVEDDICILNHEKAHKRDTVTPVSIYSGDESVASHFALVTAYEDIKKRLKDSEK
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MVVMDALVEDDICILNHEKAHKRDTVTPVSIYSGDESVASHFALVTAYEDIKKRLKDSEK
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB6 ENSLLKKRIRFLEEKLIARFEEETSSVGREQVNKAYHAYREVCIDRDNLKSKLDKMNKDN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ENSLLKKRIRFLEEKLIARFEEETSSVGREQVNKAYHAYREVCIDRDNLKSKLDKMNKDN
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB6 SESLKVLNEQLQSKEVELLQLRTEVETQQVMRNLNPPSSNWEVEKLSCDLKIHGLEQELE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SESLKVLNEQLQSKEVELLQLRTEVETQQVMRNLNPPSSNWEVEKLSCDLKIHGLEQELE
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB6 LMRKECSDLKIELQKAKQTDPYQEDNLKSRDLQKLSISSDNMQHAYWELKREMSNLHLVT
::::::::::::::::::::::::::::::::::::::
XP_011 LMRKECSDLKIELQKAKQTDPYQEDNLKSRDLQKLSISRVSVAQPGVQWRNHGIA
190 200 210 220 230
240 250 260 270 280 290
pF1KB6 QVQAELLRKLKTSTAIKKACAPVGCSEDLGRDSTKLHLMNFTATYTRHPPLLPNGKALCH
>>XP_016880921 (OMIM: 608476) PREDICTED: TANK-binding ki (613 aa)
initn: 207 init1: 145 opt: 208 Z-score: 174.7 bits: 41.8 E(85289): 0.0054
Smith-Waterman score: 221; 24.9% identity (51.7% similar) in 321 aa overlap (1-247:1-320)
10 20 30 40 50
pF1KB6 MDALVEDDICILNHEKAHKR----DTVTPVSIYSGDESVASHFALVTAYEDIKKRLKDSE
:... :::: ::..: :. :. .:: ::::::.::: :::.:: :
XP_016 MESMFEDDISILTQEALGPSEVWLDSPGDPSL-GGDMCSASHFALITAYGDIKERLGGLE
10 20 30 40 50
60 70 80
pF1KB6 KENSLLKKRIRFLE----------------------------EKL-----IARFEEETSS
.::. :..:.. : ::. . .:..: ..
XP_016 RENATLRRRLKVYEIKYPLISDFGEEHGFSLYEIKDGSLLEVEKVSLQQRLNQFQHEKNK
60 70 80 90 100 110
90 100 110 120 130
pF1KB6 VGREQVNKAYHAYREVCIDRDNLKSKLDKMNKDNSESLKV---LNEQLQSKE--------
.::... .::...:.....:...: .: :. :..::....
XP_016 EQEEQLGEMIQAYEKLCVEKSDLETELREMRALVETHLRQICGLEQQLRQQQGLQDAAFS
120 130 140 150 160 170
140 150 160 170
pF1KB6 ----------------VELLQLRTEVETQQVMRNLNPPS-SNWEVEKLSCDLKI-----H
.. : :: ... . :: :. : ..: :. .
XP_016 NLSPPPAPAPPCTDLDLHYLALRGGSGLSHAGWPGSTPSVSDLERRRLEEALEAAQGEAR
180 190 200 210 220 230
180 190 200 210 220
pF1KB6 GLEQELELMRKECSDLKIELQKAKQTDPYQ-EDNLKSRDLQKLSISSD---NMQHAYWEL
: . . : .. :: :. ::.. ..: . .: . ::. .. .: :. :: ::
XP_016 GAQLREEQLQAECERLQGELKQLQETRAQDLASNQSERDMAWVKRVGDDQVNLALAYTEL
240 250 260 270 280 290
230 240 250 260 270 280
pF1KB6 KREMSNLHLVTQVQAELLRKLKTSTAIKKACAPVGCSEDLGRDSTKLHLMNFTATYTRHP
.:.. :. ....:...:: :
XP_016 TEELGRLRELSSLQGRILRTLLQEQARSGGQRHSPLSQRHSPAPQCPSPSPPARAAPPCP
300 310 320 330 340 350
>>XP_016880920 (OMIM: 608476) PREDICTED: TANK-binding ki (614 aa)
initn: 207 init1: 145 opt: 205 Z-score: 172.4 bits: 41.4 E(85289): 0.0073
Smith-Waterman score: 222; 28.2% identity (51.4% similar) in 323 aa overlap (1-247:1-321)
10 20 30 40 50
pF1KB6 MDALVEDDICILNHEKAHKR----DTVTPVSIYSGDESVASHFALVTAYEDIKKRLKDSE
:... :::: ::..: :. :. .:: ::::::.::: :::.:: :
XP_016 MESMFEDDISILTQEALGPSEVWLDSPGDPSL-GGDMCSASHFALITAYGDIKERLGGLE
10 20 30 40 50
60 70 80 90 100 110
pF1KB6 KENSLLKKRIRFLEEK--LIARFEEETSSVGREQVNKAYHAYREVCIDR--DNLKSKLDK
.::. :..:.. : : ::. : :: . : . . ..: ... .... .:.:
XP_016 RENATLRRRLKVYEIKYPLISDFGEEHGFSLYEIKDGSLLEVEKVSLQQRLNQFQHELQK
60 70 80 90 100 110
120 130 140
pF1KB6 MNKDNSESLKVL---NEQL----QSKEVELLQLRTEVET--------QQVMR--------
::.. :.: . :.: .. :.:: ..:. ::: .: .:
XP_016 -NKEQEEQLGEMIQAYEKLCVEKSDLETELREMRALVETHLRQICGLEQQLRQQQGLQDA
120 130 140 150 160 170
150 160 170
pF1KB6 ---NLNPP-----------------------SSNWEVEKLSC-DLKIHGLEQELEL----
::.:: : .: : ::. . ::. ::
XP_016 AFSNLSPPPAPAPPCTDLDLHYLALRGGSGLSHGWPGSTPSVSDLERRRLEEALEAAQGE
180 190 200 210 220 230
180 190 200 210 220
pF1KB6 ----------MRKECSDLKIELQKAKQTDPYQ-EDNLKSRDLQKLSISSD---NMQHAYW
.. :: :. ::.. ..: . .: . ::. .. .: :. ::
XP_016 ARGAQLREEQLQAECERLQGELKQLQETRAQDLASNQSERDMAWVKRVGDDQVNLALAYT
240 250 260 270 280 290
230 240 250 260 270 280
pF1KB6 ELKREMSNLHLVTQVQAELLRKLKTSTAIKKACAPVGCSEDLGRDSTKLHLMNFTATYTR
:: .:.. :. ....:...:: :
XP_016 ELTEELGRLRELSSLQGRILRTLLQEQARSGGQRHSPLSQRHSPAPQCPSPSPPARAAPP
300 310 320 330 340 350
392 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 20:26:20 2016 done: Sat Nov 5 20:26:21 2016
Total Scan time: 8.530 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]