Result of FASTA (omim) for
pFN21AB7591
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7591, 226 aa
1>>>pF1KB7591 226 - 226 aa - 226 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.6821+/-0.000314; mu= 8.2913+/- 0.020
mean_var=279.1817+/-57.285, 0's: 0 Z-trim(125.8): 197 B-trim: 1696 in 2/58
Lambda= 0.076759
statistics sampled from 49880 (50194) to 49880 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.853), E-opt: 0.2 (0.589), width: 16
Scan time: 8.140
The best scores are: opt bits E(85289)
NP_006252 (OMIM: 262600,601538) homeobox protein p ( 226) 1608 189.8 3.2e-48
NP_038463 (OMIM: 601881,611038) retinal homeobox p ( 346) 374 53.4 5.7e-07
NP_703149 (OMIM: 300154) homeobox protein ESX1 [Ho ( 406) 331 48.7 1.7e-05
NP_001306003 (OMIM: 605726,610362,610381,613757) r ( 230) 326 47.8 1.8e-05
NP_115485 (OMIM: 604529) homeobox protein orthoped ( 325) 323 47.7 2.8e-05
XP_016870292 (OMIM: 604675) PREDICTED: paired meso ( 193) 309 45.8 5.9e-05
NP_116142 (OMIM: 605726,610362,610381,613757) reti ( 184) 307 45.6 6.7e-05
NP_005160 (OMIM: 602078,602753) paired mesoderm ho ( 284) 307 45.8 8.7e-05
NP_057391 (OMIM: 604675) paired mesoderm homeobox ( 253) 302 45.2 0.00012
XP_011537084 (OMIM: 601527,613456) PREDICTED: ALX ( 231) 296 44.5 0.00018
NP_001297089 (OMIM: 106210,120430,136520,148190,16 ( 286) 297 44.7 0.00019
NP_001297090 (OMIM: 106210,120430,136520,148190,16 ( 286) 297 44.7 0.00019
NP_114150 (OMIM: 609852) homeobox protein MIXL1 is ( 232) 294 44.3 0.00021
NP_006483 (OMIM: 136760,606014) homeobox protein a ( 343) 297 44.8 0.00021
NP_008913 (OMIM: 601527,613456) ALX homeobox prote ( 326) 296 44.7 0.00022
NP_001245394 (OMIM: 106210,120430,136520,148190,16 ( 422) 297 45.0 0.00024
NP_001245393 (OMIM: 106210,120430,136520,148190,16 ( 422) 297 45.0 0.00024
NP_000271 (OMIM: 106210,120430,136520,148190,16555 ( 422) 297 45.0 0.00024
NP_001121084 (OMIM: 106210,120430,136520,148190,16 ( 422) 297 45.0 0.00024
NP_001245391 (OMIM: 106210,120430,136520,148190,16 ( 436) 297 45.0 0.00024
NP_001245392 (OMIM: 106210,120430,136520,148190,16 ( 436) 297 45.0 0.00024
NP_001297087 (OMIM: 106210,120430,136520,148190,16 ( 436) 297 45.0 0.00024
NP_001595 (OMIM: 106210,120430,136520,148190,16555 ( 436) 297 45.0 0.00024
NP_620689 (OMIM: 300004,300215,300382,300419,30835 ( 562) 296 45.0 0.0003
NP_001290437 (OMIM: 612019) intestine-specific hom ( 245) 289 43.8 0.00032
NP_006875 (OMIM: 602504) short stature homeobox pr ( 331) 291 44.2 0.00032
NP_000545 (OMIM: 120970,268000,602225,613829) cone ( 299) 289 43.9 0.00036
NP_003915 (OMIM: 209880,603851,613013) paired meso ( 314) 289 43.9 0.00037
NP_068745 (OMIM: 605420,609597,613451,615529) home ( 411) 291 44.3 0.00037
NP_003021 (OMIM: 602504) short stature homeobox pr ( 355) 288 43.9 0.00043
XP_006711451 (OMIM: 167420,202650) PREDICTED: pair ( 198) 278 42.4 0.00065
NP_008833 (OMIM: 167420,202650) paired mesoderm ho ( 217) 278 42.5 0.00069
NP_073207 (OMIM: 167420,202650) paired mesoderm ho ( 245) 278 42.5 0.00074
XP_016883326 (OMIM: 122000,148300,605020,614195) P ( 280) 278 42.6 0.0008
NP_001128726 (OMIM: 167410,268220) paired box prot ( 505) 282 43.4 0.00083
NP_001243201 (OMIM: 122000,148300,605020,614195) v ( 301) 278 42.7 0.00083
NP_039236 (OMIM: 167410,268220) paired box protein ( 518) 282 43.4 0.00084
NP_002575 (OMIM: 167410,268220) paired box protein ( 520) 282 43.4 0.00085
NP_005020 (OMIM: 107250,602669,610623) pituitary h ( 302) 277 42.6 0.0009
NP_055403 (OMIM: 122000,148300,605020,614195) visu ( 365) 278 42.8 0.00093
NP_001297088 (OMIM: 106210,120430,136520,148190,16 ( 401) 276 42.6 0.0011
NP_878314 (OMIM: 142993,610092,610093) visual syst ( 361) 273 42.2 0.0014
NP_852126 (OMIM: 122880,148820,193500,268220,60659 ( 403) 273 42.3 0.0015
NP_852125 (OMIM: 122880,148820,193500,268220,60659 ( 407) 273 42.3 0.0015
NP_852122 (OMIM: 122880,148820,193500,268220,60659 ( 479) 273 42.4 0.0016
NP_001120838 (OMIM: 122880,148820,193500,268220,60 ( 483) 273 42.4 0.0016
NP_852123 (OMIM: 122880,148820,193500,268220,60659 ( 484) 273 42.4 0.0016
NP_852124 (OMIM: 122880,148820,193500,268220,60659 ( 505) 273 42.4 0.0017
NP_001263380 (OMIM: 606701) dorsal root ganglia ho ( 263) 267 41.4 0.0018
NP_006184 (OMIM: 125853,167413,612225,612227) pair ( 343) 268 41.6 0.0019
>>NP_006252 (OMIM: 262600,601538) homeobox protein proph (226 aa)
initn: 1608 init1: 1608 opt: 1608 Z-score: 986.6 bits: 189.8 E(85289): 3.2e-48
Smith-Waterman score: 1608; 99.6% identity (100.0% similar) in 226 aa overlap (1-226:1-226)
10 20 30 40 50 60
pF1KB7 MEAERRRQAEKPKKGRVGSSLLPERHPATGTPTTTVDSSAPPCRRLPGAGGGRSRFSPQG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 MEAERRRQAEKPKKGRVGSSLLPERHPATGTPTTTVDSSAPPCRRLPGAGGGRSRFSPQG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 GQRGRPHSRRRHRTTFSPVQLEQLESAFGRNQYPDIWARESLARDTGLSEARIQVWFQNR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 GQRGRPHSRRRHRTTFSPVQLEQLESAFGRNQYPDIWARESLARDTGLSEARIQVWFQNR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 RAKQRKQERSLLQPLAHLSPATFSSFLPESTACPYSYAAPPPPVTCFPHPYSHALPSQPS
:::::::::::::::::::::.::::::::::::::::::::::::::::::::::::::
NP_006 RAKQRKQERSLLQPLAHLSPAAFSSFLPESTACPYSYAAPPPPVTCFPHPYSHALPSQPS
130 140 150 160 170 180
190 200 210 220
pF1KB7 TGGAFALSHQSEDWYPTLHPAPAGHLPCPPPPPMLPLSLEPSKSWN
::::::::::::::::::::::::::::::::::::::::::::::
NP_006 TGGAFALSHQSEDWYPTLHPAPAGHLPCPPPPPMLPLSLEPSKSWN
190 200 210 220
>>NP_038463 (OMIM: 601881,611038) retinal homeobox prote (346 aa)
initn: 380 init1: 250 opt: 374 Z-score: 246.1 bits: 53.4 E(85289): 5.7e-07
Smith-Waterman score: 375; 37.0% identity (56.0% similar) in 243 aa overlap (2-221:62-295)
10 20
pF1KB7 MEAERRRQAEK--PKKGRVGSSLLPERHPAT
: .:: :. :: . :: : ::
NP_038 LHSIEAILGFTKDDGILGTFPAERGARGAKERDRRLGARPACPKAPEEGSEPSPPPAPA-
40 50 60 70 80 90
30 40 50 60 70 80
pF1KB7 GTPTTTVDSSAPPCRRLPGAGGGRSRFSPQGGQRG--------RPHSR-RRHRTTFSPVQ
:. .. : : . :: . . : : : .:... ::.::::. :
NP_038 --PAPEYEAPRPYCPKEPGEARPSPGL-PVGPATGEAKLSEEEQPKKKHRRNRTTFTTYQ
100 110 120 130 140
90 100 110 120 130
pF1KB7 LEQLESAFGRNQYPDIWARESLARDTGLSEARIQVWFQNRRAKQRKQERSLLQPLA-HLS
:..:: :: ...:::...:: :: ..: :.:.:::::::::: :.::. .. . . :
NP_038 LHELERAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNRRAKWRRQEKLEVSSMKLQDS
150 160 170 180 190 200
140 150 160 170 180 190
pF1KB7 PA-TFSSFLPESTACPYSYAAPP----PPVTCFPHPYSHALPSQPSTGGAFALSHQSEDW
: .:: : .: : . :.: : .: : : :. ::: :: ::
NP_038 PLLSFSRSPPSATLSPLG-AGPGSGGGPAGGALPLE-SWLGPPLPG-GGATAL--QSLPG
210 220 230 240 250 260
200 210 220
pF1KB7 Y-PTLHPAPAGHLPCPPPPPML---PLS--LEPSKSWN
. : . ::.. : :::::.: ::. :.:
NP_038 FGPPAQSLPASYTPPPPPPPFLNSPPLGPGLQPLAPPPPSYPCGPGFGDKFPLDEADPRN
270 280 290 300 310 320
NP_038 SSIAALRLKAKEHIQAIGKPWQAL
330 340
>>NP_703149 (OMIM: 300154) homeobox protein ESX1 [Homo s (406 aa)
initn: 291 init1: 239 opt: 331 Z-score: 219.7 bits: 48.7 E(85289): 1.7e-05
Smith-Waterman score: 347; 32.3% identity (52.4% similar) in 229 aa overlap (11-225:93-306)
10 20 30 40
pF1KB7 MEAERRRQAEKPKKGRVGSSLLPERHPATGTPTTTVDSSA
::.. . :: .. : :::..
NP_703 TEGSVPSDDQDREGGGGHEPEQQQEEPPLTKPEQQQEEPPLLELKQEQEEPPQTTVEGPQ
70 80 90 100 110 120
50 60 70 80 90 100
pF1KB7 PPCRRLPGAGGGRSRFSPQGGQRGRPHSRRRHRTTFSPVQLEQLESAFGRNQYPDIWARE
: : : .. .:: :. .::.::.:. ::..::. : ..::::. :::
NP_703 P-------AEGPQTAEGPQP-----PERKRRRRTAFTQFQLQELENFFDESQYPDVVARE
130 140 150 160 170
110 120 130 140 150 160
pF1KB7 SLARDTGLSEARIQVWFQNRRAKQRKQERSLLQPLAHLSPATFSSFLPESTACPYSYAAP
:: .:.: :.:::::::::: ....: :. : . . : .. : . : ::::
NP_703 RLAARLNLTEDRVQVWFQNRRAKWKRNQRVLM--LRNTATADLAHPLDMFLGGAY-YAAP
180 190 200 210 220
170 180 190 200 210
pF1KB7 P-PPVTC------FPHPYSHALPSQPSTGGAFALSHQSE-DWYPTLHPAPAGH--LPCPP
:. : .:.: .: .: . . .: . :.: : : ::
NP_703 ALDPALCVHLVPQLPRPPVLPVPPMPPRPPMVPMPPRPPIAPMPPMAPVPPGSRMAPVPP
230 240 250 260 270 280
220
pF1KB7 PPPMLPLS----LEPSKSWN
: : :. . : :
NP_703 GPRMAPVPPWPPMAPVPPWPPMAPVPTGPPMAPVPPGPPMARVPPGPPMARVPPGPPMAP
290 300 310 320 330 340
>>NP_001306003 (OMIM: 605726,610362,610381,613757) retin (230 aa)
initn: 297 init1: 265 opt: 326 Z-score: 219.3 bits: 47.8 E(85289): 1.8e-05
Smith-Waterman score: 326; 38.9% identity (57.2% similar) in 180 aa overlap (12-183:11-183)
10 20 30 40 50
pF1KB7 MEAERRRQAEKPKKGRV--GSSLL--PERHPATGTPTTTVDSSAPPCRRL-PGAGGGRSR
: :: :: : : ::.. :.. . : : :: : .
NP_001 MPAPVEGTDFPGAGRQAWGSPALSLPVAPPAVSPPSVPLPSHQVGAMFLSPGEGPATEG
10 20 30 40 50
60 70 80 90 100 110
pF1KB7 FSPQGGQRGRPHSRRRHRTTFSPVQLEQLESAFGRNQYPDIWARESLARDTGLSEARIQV
. :... ...::.::::. ::.::: :: ..:::...:: :: . : :.:.::
NP_001 GGLGPGEEAPKKKHRRNRTTFTTYQLHQLERAFEASHYPDVYSREELAAKVHLPEVRVQV
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB7 WFQNRRAKQRKQERSLLQPLAHLSPATFSSFLPESTACPYSYAAPPP---PVTCFPHPYS
:::::::: :.::: : : :. . :::. : :. : :: :. . :
NP_001 WFQNRRAKWRRQER-----LESGSGAVAAPRLPEAPALPF--ARPPAMSLPLEPWLGPGP
120 130 140 150 160 170
180 190 200 210 220
pF1KB7 HALPSQPSTGGAFALSHQSEDWYPTLHPAPAGHLPCPPPPPMLPLSLEPSKSWN
:.:. : :
NP_001 PAVPGLPRLLGPGPGLQASFGPHAFAPTFADGFALEEASLRLLAKEHAQALDRAWPPA
180 190 200 210 220 230
>>NP_115485 (OMIM: 604529) homeobox protein orthopedia [ (325 aa)
initn: 361 init1: 276 opt: 323 Z-score: 215.9 bits: 47.7 E(85289): 2.8e-05
Smith-Waterman score: 330; 33.7% identity (60.2% similar) in 196 aa overlap (18-210:54-224)
10 20 30 40
pF1KB7 MEAERRRQAEKPKKGRVGSSLLPERHPAT--GTPTTTVDSSAPPCRR
:..::: . .: .::.. . :. : ..
NP_115 REAVKCRLGVGGSDPGGHPGDLAPNSDPVEGATLLPGEDITTVGSTPASLAVSAKDPDKQ
30 40 50 60 70 80
50 60 70 80 90 100
pF1KB7 LPGAGGGRSRFSPQGGQRGRPHSRRRHRTTFSPVQLEQLESAFGRNQYPDIWARESLARD
:: :: . :.::. ....:::: :.:.::..:: .:....::::. :: ::
NP_115 -PGPQGGPN--PSQAGQQQGQQKQKRHRTRFTPAQLNELERSFAKTHYPDIFMREELALR
90 100 110 120 130 140
110 120 130 140 150 160
pF1KB7 TGLSEARIQVWFQNRRAKQRKQERSLLQPLAHLSPATFSSFLPESTACPYSYAAPPPPVT
::.:.:.:::::::::: .:.... . .:.:. : : .
NP_115 IGLTESRVQVWFQNRRAKWKKRKKTT---NVFRAPGTL---------------LPTPGLP
150 160 170 180
170 180 190 200 210 220
pF1KB7 CFPHPYSHALPSQPSTGGAFALSHQSED-WYPTLHPAPAGHLPCPPPPPMLPLSLEPSKS
:: : : . . : .. : .. : . :. ...:: ::
NP_115 QFP---SAAAAAAAAMGDSLCSFHANDTRWAAAAMPG-VSQLPLPPALGRQQAMAQSLSQ
190 200 210 220 230
pF1KB7 WN
NP_115 CSLAAGPPPNSMGLSNSLAGSNGAGLQSHLYQPAFPGMVPASLPGPSNVSGSPQLCSSPD
240 250 260 270 280 290
>>XP_016870292 (OMIM: 604675) PREDICTED: paired mesoderm (193 aa)
initn: 340 init1: 261 opt: 309 Z-score: 209.9 bits: 45.8 E(85289): 5.9e-05
Smith-Waterman score: 309; 40.4% identity (65.2% similar) in 141 aa overlap (48-183:23-160)
20 30 40 50 60 70
pF1KB7 GSSLLPERHPATGTPTTTVDSSAPPCRRLPGAGGGRSRFSPQGGQRGRPHSRRRHRTTFS
: : :. .:. : ...::.::::.
XP_016 MGPLHRETGPERSGHRLKVTELGCGEGECPSPGRGSAAKRKKKQRRNRTTFN
10 20 30 40 50
80 90 100 110 120 130
pF1KB7 PVQLEQLESAFGRNQYPDIWARESLARDTGLSEARIQVWFQNRRAKQRKQERSLLQPLAH
::. :: .: :..::: ..:: ::: ..:::::.:::::::::: :..::..: :
XP_016 SSQLQALERVFERTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFRRNERAML---AS
60 70 80 90 100
140 150 160 170 180 190
pF1KB7 LSPATFSSFLPEST----ACPYSYAAPPPPVT-CFPHPYSHALPSQPSTGGAFALSHQSE
: . ..:. :.. . : : : .. ::: . : .:...:
XP_016 RSASLLKSYSQEAAIEQPVAPRPTALSPDYLSWTASSPYSTVPPYSPGSSGPATPGVNMA
110 120 130 140 150 160
200 210 220
pF1KB7 DWYPTLHPAPAGHLPCPPPPPMLPLSLEPSKSWN
XP_016 NSIASLRLKAKEFSLHHSQVPTVN
170 180 190
>>NP_116142 (OMIM: 605726,610362,610381,613757) retina a (184 aa)
initn: 313 init1: 265 opt: 307 Z-score: 208.9 bits: 45.6 E(85289): 6.7e-05
Smith-Waterman score: 307; 41.4% identity (61.4% similar) in 140 aa overlap (47-183:5-137)
20 30 40 50 60 70
pF1KB7 VGSSLLPERHPATGTPTTTVDSSAPPCRRLPGAGGGRSRFSPQGGQRGRPHSRRRHRTTF
:: : . . :... ...::.::::
NP_116 MFLSPGEGPATEGGGLGPGEEAPKKKHRRNRTTF
10 20 30
80 90 100 110 120 130
pF1KB7 SPVQLEQLESAFGRNQYPDIWARESLARDTGLSEARIQVWFQNRRAKQRKQERSLLQPLA
. ::.::: :: ..:::...:: :: . : :.:.:::::::::: :.::: :
NP_116 TTYQLHQLERAFEASHYPDVYSREELAAKVHLPEVRVQVWFQNRRAKWRRQER-----LE
40 50 60 70 80
140 150 160 170 180 190
pF1KB7 HLSPATFSSFLPESTACPYSYAAPPP---PVTCFPHPYSHALPSQPSTGGAFALSHQSED
: :. . :::. : : .: :: :. . : :.:. : :
NP_116 SGSGAVAAPRLPEAPALP--FARPPAMSLPLEPWLGPGPPAVPGLPRLLGPGPGLQASFG
90 100 110 120 130 140
200 210 220
pF1KB7 WYPTLHPAPAGHLPCPPPPPMLPLSLEPSKSWN
NP_116 PHAFAPTFADGFALEEASLRLLAKEHAQALDRAWPPA
150 160 170 180
>>NP_005160 (OMIM: 602078,602753) paired mesoderm homeob (284 aa)
initn: 296 init1: 252 opt: 307 Z-score: 206.9 bits: 45.8 E(85289): 8.7e-05
Smith-Waterman score: 318; 37.1% identity (55.1% similar) in 205 aa overlap (19-217:36-227)
10 20 30 40
pF1KB7 MEAERRRQAEKPKKGRVGSSLLPERHPATGTPTTTVDSSAPPCRRL--
: : : ::.: : .. :: :
NP_005 LNSYDSCVAAMEASAYGDFGACSQPGGFQYSPLRPA-FPAAGPPCPALGSSNCALGALRD
10 20 30 40 50 60
50 60 70 80 90 100
pF1KB7 --PGAGGGRS-RFSPQGGQRGRPHSRRRHRTTFSPVQLEQLESAFGRNQYPDIWARESLA
:. .. .: :. . . ...:: ::::. .::..:: .:....::::..:: ::
NP_005 HQPAPYSAVPYKFFPEPSGLHEKRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELA
70 80 90 100 110 120
110 120 130 140 150 160
pF1KB7 RDTGLSEARIQVWFQNRRAKQRKQERSLLQPLAHLSPATFSSFLPESTACPYSYAAPPPP
:.:::.:::::::::: :::::. : . :. .. .. : :
NP_005 LKIDLTEARVQVWFQNRRAKFRKQERA-----ASAKGAAGAAGAKKGEARCSSEDDDSKE
130 140 150 160 170
170 180 190 200 210 220
pF1KB7 VTCFPHPYSHA-LPSQPSTGGAFALSHQSEDWYPTLHPAPAGHLPCPPPPPMLPLSLEPS
:: : : : : :: :. : : : :. :. : : : : :. ::
NP_005 STCSPTPDSTASLPPPPAPGLA------SPRLSPSPLPVALGSGPGPGPGPQ-PLKGALW
180 190 200 210 220 230
pF1KB7 KSWN
NP_005 AGVAGGGGGGPGAGAAELLKAWQPAESGPGPFSGVLSSFHRKPGPALKTNLF
240 250 260 270 280
>>NP_057391 (OMIM: 604675) paired mesoderm homeobox prot (253 aa)
initn: 317 init1: 261 opt: 302 Z-score: 204.5 bits: 45.2 E(85289): 0.00012
Smith-Waterman score: 320; 40.5% identity (66.0% similar) in 153 aa overlap (45-183:71-220)
20 30 40 50 60
pF1KB7 GRVGSSLLPERHPATGTPTTTVDSSAPPCRRLPGAGGGRSRFSPQGGQ-----RG----R
: :..:.. :. .:: :. :: :
NP_057 SHLLDLEEVAAAGRLAARPGARAEAREGAAREPSGGSSGSEAAPQDGECPSPGRGSAAKR
50 60 70 80 90 100
70 80 90 100 110 120
pF1KB7 PHSRRRHRTTFSPVQLEQLESAFGRNQYPDIWARESLARDTGLSEARIQVWFQNRRAKQR
...::.::::. ::. :: .: :..::: ..:: ::: ..:::::.:::::::::: :
NP_057 KKKQRRNRTTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFR
110 120 130 140 150 160
130 140 150 160 170 180
pF1KB7 KQERSLLQPLAHLSPATFSSFLPEST----ACPYSYAAPPPPVT-CFPHPYSHALPSQPS
..::.. :: : . ..:. :.. . : : : .. ::: . : .:.
NP_057 RNERAM---LASRSASLLKSYSQEAAIEQPVAPRPTALSPDYLSWTASSPYSTVPPYSPG
170 180 190 200 210
190 200 210 220
pF1KB7 TGGAFALSHQSEDWYPTLHPAPAGHLPCPPPPPMLPLSLEPSKSWN
..:
NP_057 SSGPATPGVNMANSIASLRLKAKEFSLHHSQVPTVN
220 230 240 250
>>XP_011537084 (OMIM: 601527,613456) PREDICTED: ALX home (231 aa)
initn: 296 init1: 276 opt: 296 Z-score: 201.3 bits: 44.5 E(85289): 0.00018
Smith-Waterman score: 304; 41.0% identity (65.3% similar) in 144 aa overlap (69-192:37-176)
40 50 60 70 80 90
pF1KB7 SAPPCRRLPGAGGGRSRFSPQGGQRGRPHSRRRHRTTFSPVQLEQLESAFGRNQYPDIWA
.:::::::. .:::.::..: ...:::...
XP_011 LRMSPVKGMQEKGELDELGDKCDSNVSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYV
10 20 30 40 50 60
100 110 120 130 140 150
pF1KB7 RESLARDTGLSEARIQVWFQNRRAKQRKQER--SLLQPLAHLSPATFS-SFLPESTACPY
::.:: : :.:::.:::::::::: ::.:: .. : .:.. ::.. : ::.. . :
XP_011 REQLALRTELTEARVQVWFQNRRAKWRKRERYGQIQQAKSHFA-ATYDISVLPRTDSYPQ
70 80 90 100 110 120
160 170 180 190
pF1KB7 -----------------SYAAPPPPVTCFPHPYSHALPSQPSTGGAFALSHQSEDWYPTL
: : .:. ::::. : :. .:. .::..
XP_011 IQNNLWAGNASGGSVVTSCMLPRDTSSCMT-PYSHS-PRTDSSYTGFS-NHQNQFSHVPL
130 140 150 160 170 180
200 210 220
pF1KB7 HPAPAGHLPCPPPPPMLPLSLEPSKSWN
XP_011 NNFFTDSLLTGATNGHAFETKPEFERRSSSIAVLRMKAKEHTANISWAM
190 200 210 220 230
226 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 01:28:30 2016 done: Sat Nov 5 01:28:31 2016
Total Scan time: 8.140 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]