FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB9292, 270 aa 1>>>pF1KB9292 270 - 270 aa - 270 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 9.8047+/-0.00077; mu= -2.7588+/- 0.047 mean_var=249.7578+/-49.782, 0's: 0 Z-trim(117.7): 2 B-trim: 0 in 0/52 Lambda= 0.081155 statistics sampled from 18470 (18472) to 18470 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.839), E-opt: 0.2 (0.567), width: 16 Scan time: 3.010 The best scores are: opt bits E(32554) CCDS1577.1 CCSAP gene_id:126731|Hs108|chr1 ( 270) 1861 229.6 1.8e-60 >>CCDS1577.1 CCSAP gene_id:126731|Hs108|chr1 (270 aa) initn: 1861 init1: 1861 opt: 1861 Z-score: 1199.0 bits: 229.6 E(32554): 1.8e-60 Smith-Waterman score: 1861; 100.0% identity (100.0% similar) in 270 aa overlap (1-270:1-270) 10 20 30 40 50 60 pF1KB9 MSPGSGVKSEYMKRYQEPRWEEYGPCYRELLHYRLGRRLLEQAHAPWLWDDWGPAGSSED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS15 MSPGSGVKSEYMKRYQEPRWEEYGPCYRELLHYRLGRRLLEQAHAPWLWDDWGPAGSSED 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB9 SASSESSGAGGPAPRCAPPSPPPPVEPATQEEAERRARGAPEEQDAEAGDAEAEDAEDAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS15 SASSESSGAGGPAPRCAPPSPPPPVEPATQEEAERRARGAPEEQDAEAGDAEAEDAEDAA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB9 LPALPVKDVEDKPEQQTRTRETDKSPTSTEPRQQPSALFARGNRKAVKSPQRSSSKIKEN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS15 LPALPVKDVEDKPEQQTRTRETDKSPTSTEPRQQPSALFARGNRKAVKSPQRSSSKIKEN 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB9 KHPFALYGWGEKQTDTGSQKTHNVCASAPVHEIHESALRAKNRRQVEKRKLVAQRQRAHS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS15 KHPFALYGWGEKQTDTGSQKTHNVCASAPVHEIHESALRAKNRRQVEKRKLVAQRQRAHS 190 200 210 220 230 240 250 260 270 pF1KB9 VDVEKNRKMKASSSENPWMTEYMRCYSARA :::::::::::::::::::::::::::::: CCDS15 VDVEKNRKMKASSSENPWMTEYMRCYSARA 250 260 270 270 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 22:12:43 2016 done: Sun Nov 6 22:12:43 2016 Total Scan time: 3.010 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]