FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3632, 314 aa 1>>>pF1KE3632 314 - 314 aa - 314 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.8451+/-0.000448; mu= 17.9495+/- 0.027 mean_var=62.0333+/-13.228, 0's: 0 Z-trim(109.2): 39 B-trim: 0 in 0/50 Lambda= 0.162840 statistics sampled from 17368 (17403) to 17368 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.549), E-opt: 0.2 (0.204), width: 16 Scan time: 6.530 The best scores are: opt bits E(85289) NP_073563 (OMIM: 605512) elongation of very long c ( 314) 2178 520.6 1.6e-147 NP_060240 (OMIM: 611814) elongation of very long c ( 296) 890 218.0 1.9e-56 XP_011513019 (OMIM: 611814) PREDICTED: elongation ( 297) 890 218.0 1.9e-56 XP_011513018 (OMIM: 611814) PREDICTED: elongation ( 326) 890 218.1 2e-56 NP_001288785 (OMIM: 611805,615957) elongation of v ( 299) 845 207.5 2.8e-53 NP_068586 (OMIM: 611805,615957) elongation of very ( 299) 845 207.5 2.8e-53 XP_016865374 (OMIM: 614451) PREDICTED: elongation ( 281) 821 201.8 1.3e-51 NP_079206 (OMIM: 614451) elongation of very long c ( 281) 821 201.8 1.3e-51 XP_005248663 (OMIM: 614451) PREDICTED: elongation ( 281) 821 201.8 1.3e-51 NP_001098028 (OMIM: 614451) elongation of very lon ( 281) 821 201.8 1.3e-51 XP_006714758 (OMIM: 614451) PREDICTED: elongation ( 281) 821 201.8 1.3e-51 XP_011541953 (OMIM: 614451) PREDICTED: elongation ( 281) 821 201.8 1.3e-51 XP_016865375 (OMIM: 614451) PREDICTED: elongation ( 268) 804 197.8 2.1e-50 XP_016865376 (OMIM: 614451) PREDICTED: elongation ( 268) 804 197.8 2.1e-50 XP_005248664 (OMIM: 614451) PREDICTED: elongation ( 268) 804 197.8 2.1e-50 NP_001284546 (OMIM: 614451) elongation of very lon ( 268) 804 197.8 2.1e-50 NP_001243328 (OMIM: 611813) elongation of very lon ( 279) 751 185.3 1.2e-46 NP_073732 (OMIM: 611813) elongation of very long c ( 279) 751 185.3 1.2e-46 NP_001284547 (OMIM: 614451) elongation of very lon ( 194) 622 154.9 1.2e-37 NP_001229757 (OMIM: 611805,615957) elongation of v ( 326) 614 153.2 6.6e-37 NP_001243331 (OMIM: 611813) elongation of very lon ( 198) 542 136.1 5.5e-32 NP_001229759 (OMIM: 611805,615957) elongation of v ( 262) 534 134.4 2.5e-31 NP_001243330 (OMIM: 611813) elongation of very lon ( 252) 494 124.9 1.7e-28 NP_689523 (OMIM: 611815) elongation of very long c ( 270) 307 81.0 2.9e-15 XP_011538547 (OMIM: 611815) PREDICTED: elongation ( 270) 307 81.0 2.9e-15 NP_001124193 (OMIM: 611546) elongation of very lon ( 265) 295 78.2 2e-14 XP_011530536 (OMIM: 611546) PREDICTED: elongation ( 265) 295 78.2 2e-14 NP_076995 (OMIM: 611546) elongation of very long c ( 265) 295 78.2 2e-14 XP_011530535 (OMIM: 611546) PREDICTED: elongation ( 265) 295 78.2 2e-14 XP_016866474 (OMIM: 611814) PREDICTED: elongation ( 150) 241 65.3 8.6e-11 XP_011530537 (OMIM: 611546) PREDICTED: elongation ( 181) 226 61.9 1.1e-09 >>NP_073563 (OMIM: 605512) elongation of very long chain (314 aa) initn: 2178 init1: 2178 opt: 2178 Z-score: 2769.6 bits: 520.6 E(85289): 1.6e-147 Smith-Waterman score: 2178; 99.7% identity (100.0% similar) in 314 aa overlap (1-314:1-314) 10 20 30 40 50 60 pF1KE3 MGLLDSEPGSVLNVVSTALNDTVEFYRWTWSIADKRVENWPLMRSPWPTLSISTLYLLFV :::::::::::::::::::::::::::::::::::::::::::.:::::::::::::::: NP_073 MGLLDSEPGSVLNVVSTALNDTVEFYRWTWSIADKRVENWPLMQSPWPTLSISTLYLLFV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 WLGPKWMKDREPFQMRLVLIIYNFGMVLLNLFIFRELFMGSYNAGYSYICQSVDYSNNVH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_073 WLGPKWMKDREPFQMRLVLIIYNFGMVLLNLFIFRELFMGSYNAGYSYICQSVDYSNNVH 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 EVRIAAALWWYFVSKGVEYLDTVFFILRKKNNQVSFLHVYHHCTMFTLWWIGIKWVAGGQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_073 EVRIAAALWWYFVSKGVEYLDTVFFILRKKNNQVSFLHVYHHCTMFTLWWIGIKWVAGGQ 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 AFFGAQLNSFIHVIMYSYYGLTAFGPWIQKYLWWKRYLTMLQLIQFHVTIGHTALSLYTD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_073 AFFGAQLNSFIHVIMYSYYGLTAFGPWIQKYLWWKRYLTMLQLIQFHVTIGHTALSLYTD 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 CPFPKWMHWALIAYAISFIFLFLNFYIRTYKEPKKPKAGKTAMNGISANGVSKSEKQLMI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_073 CPFPKWMHWALIAYAISFIFLFLNFYIRTYKEPKKPKAGKTAMNGISANGVSKSEKQLMI 250 260 270 280 290 300 310 pF1KE3 ENGKKQKNGKAKGD :::::::::::::: NP_073 ENGKKQKNGKAKGD 310 >>NP_060240 (OMIM: 611814) elongation of very long chain (296 aa) initn: 674 init1: 438 opt: 890 Z-score: 1134.6 bits: 218.0 E(85289): 1.9e-56 Smith-Waterman score: 898; 44.4% identity (74.4% similar) in 293 aa overlap (18-297:6-296) 10 20 30 40 50 pF1KE3 MGLLDSEPGSVLNVVSTALNDTVE-FYRWTWSIADKRVENWPLMRSPWPTLSISTLYLLF :..: .. : .. :.::..: .. : ::. ....::: NP_060 MEHLKAFDDEINAFLDNMFGPRDSRVRGWFMLDSYLPTFFLTVMYLLS 10 20 30 40 60 70 80 90 100 110 pF1KE3 VWLGPKWMKDREPFQMRLVLIIYNFGMVLLNLFIFRELFMGSYNAGYSYICQSVDYSNNV .::: :.::.: ...: .: .::.:..::. ... ::.......::. ::.. : . NP_060 IWLGNKYMKNRPALSLRGILTLYNLGITLLSAYMLAELILSTWEGGYNLQCQDLT-SAGE 50 60 70 80 90 100 120 130 140 150 160 170 pF1KE3 HEVRIAAALWWYFVSKGVEYLDTVFFILRKKNNQVSFLHVYHHCTMFTLWWIGIKWVAGG ..:.: .::::. ::.::.:::.::.::::..:..::::::: .::..:: ..:. : NP_060 ADIRVAKVLWWYYFSKSVEFLDTIFFVLRKKTSQITFLHVYHHASMFNIWWCVLNWIPCG 110 120 130 140 150 160 180 190 200 210 220 230 pF1KE3 QAFFGAQLNSFIHVIMYSYYGLTAFGPWIQKYLWWKRYLTMLQLIQFHVTIGHTALSLYT :.::: ::::::..:::::::..: : ..::::::.:::. ::.:: .:: :: .. NP_060 QSFFGPTLNSFIHILMYSYYGLSVF-PSMHKYLWWKKYLTQAQLVQFVLTITHTMSAVVK 170 180 190 200 210 220 240 250 260 270 280 pF1KE3 DCPFPKWMHWALIAYAISFIFLFLNFYIRTY-KEPKK-----PKAGKTAMNGIS------ : :: .: .....::::::..:: :.: : : ::: . ::.: NP_060 PCGFPFGCLIFQSSYMLTLVILFLNFYVQTYRKKPMKKDMQEPPAGKEVKNGFSKAYFTA 230 240 250 260 270 280 290 300 310 pF1KE3 ANGVSKSEKQLMIENGKKQKNGKAKGD :::: ... : NP_060 ANGVMNKKAQ 290 >>XP_011513019 (OMIM: 611814) PREDICTED: elongation of v (297 aa) initn: 674 init1: 438 opt: 890 Z-score: 1134.6 bits: 218.0 E(85289): 1.9e-56 Smith-Waterman score: 898; 44.4% identity (74.4% similar) in 293 aa overlap (18-297:7-297) 10 20 30 40 50 pF1KE3 MGLLDSEPGSVLNVVSTALNDTVE-FYRWTWSIADKRVENWPLMRSPWPTLSISTLYLLF :..: .. : .. :.::..: .. : ::. ....::: XP_011 MMEHLKAFDDEINAFLDNMFGPRDSRVRGWFMLDSYLPTFFLTVMYLLS 10 20 30 40 60 70 80 90 100 110 pF1KE3 VWLGPKWMKDREPFQMRLVLIIYNFGMVLLNLFIFRELFMGSYNAGYSYICQSVDYSNNV .::: :.::.: ...: .: .::.:..::. ... ::.......::. ::.. : . XP_011 IWLGNKYMKNRPALSLRGILTLYNLGITLLSAYMLAELILSTWEGGYNLQCQDLT-SAGE 50 60 70 80 90 100 120 130 140 150 160 170 pF1KE3 HEVRIAAALWWYFVSKGVEYLDTVFFILRKKNNQVSFLHVYHHCTMFTLWWIGIKWVAGG ..:.: .::::. ::.::.:::.::.::::..:..::::::: .::..:: ..:. : XP_011 ADIRVAKVLWWYYFSKSVEFLDTIFFVLRKKTSQITFLHVYHHASMFNIWWCVLNWIPCG 110 120 130 140 150 160 180 190 200 210 220 230 pF1KE3 QAFFGAQLNSFIHVIMYSYYGLTAFGPWIQKYLWWKRYLTMLQLIQFHVTIGHTALSLYT :.::: ::::::..:::::::..: : ..::::::.:::. ::.:: .:: :: .. XP_011 QSFFGPTLNSFIHILMYSYYGLSVF-PSMHKYLWWKKYLTQAQLVQFVLTITHTMSAVVK 170 180 190 200 210 220 240 250 260 270 280 pF1KE3 DCPFPKWMHWALIAYAISFIFLFLNFYIRTY-KEPKK-----PKAGKTAMNGIS------ : :: .: .....::::::..:: :.: : : ::: . ::.: XP_011 PCGFPFGCLIFQSSYMLTLVILFLNFYVQTYRKKPMKKDMQEPPAGKEVKNGFSKAYFTA 230 240 250 260 270 280 290 300 310 pF1KE3 ANGVSKSEKQLMIENGKKQKNGKAKGD :::: ... : XP_011 ANGVMNKKAQ 290 >>XP_011513018 (OMIM: 611814) PREDICTED: elongation of v (326 aa) initn: 674 init1: 438 opt: 890 Z-score: 1134.0 bits: 218.1 E(85289): 2e-56 Smith-Waterman score: 898; 44.4% identity (74.4% similar) in 293 aa overlap (18-297:36-326) 10 20 30 40 pF1KE3 MGLLDSEPGSVLNVVSTALNDTVE-FYRWTWSIADKRVENWPLMRSP :..: .. : .. :.::..: .. : XP_011 QLPEAVMLSSHTVRDQPAGPTFLEILEHLKAFDDEINAFLDNMFGPRDSRVRGWFMLDSY 10 20 30 40 50 60 50 60 70 80 90 100 pF1KE3 WPTLSISTLYLLFVWLGPKWMKDREPFQMRLVLIIYNFGMVLLNLFIFRELFMGSYNAGY ::. ....::: .::: :.::.: ...: .: .::.:..::. ... ::.......:: XP_011 LPTFFLTVMYLLSIWLGNKYMKNRPALSLRGILTLYNLGITLLSAYMLAELILSTWEGGY 70 80 90 100 110 120 110 120 130 140 150 160 pF1KE3 SYICQSVDYSNNVHEVRIAAALWWYFVSKGVEYLDTVFFILRKKNNQVSFLHVYHHCTMF . ::.. : . ..:.: .::::. ::.::.:::.::.::::..:..::::::: .:: XP_011 NLQCQDLT-SAGEADIRVAKVLWWYYFSKSVEFLDTIFFVLRKKTSQITFLHVYHHASMF 130 140 150 160 170 180 170 180 190 200 210 220 pF1KE3 TLWWIGIKWVAGGQAFFGAQLNSFIHVIMYSYYGLTAFGPWIQKYLWWKRYLTMLQLIQF ..:: ..:. ::.::: ::::::..:::::::..: : ..::::::.:::. ::.:: XP_011 NIWWCVLNWIPCGQSFFGPTLNSFIHILMYSYYGLSVF-PSMHKYLWWKKYLTQAQLVQF 190 200 210 220 230 240 230 240 250 260 270 280 pF1KE3 HVTIGHTALSLYTDCPFPKWMHWALIAYAISFIFLFLNFYIRTY-KEPKK-----PKAGK .:: :: .. : :: .: .....::::::..:: :.: : : ::: XP_011 VLTITHTMSAVVKPCGFPFGCLIFQSSYMLTLVILFLNFYVQTYRKKPMKKDMQEPPAGK 250 260 270 280 290 300 290 300 310 pF1KE3 TAMNGIS------ANGVSKSEKQLMIENGKKQKNGKAKGD . ::.: :::: ... : XP_011 EVKNGFSKAYFTAANGVMNKKAQ 310 320 >>NP_001288785 (OMIM: 611805,615957) elongation of very (299 aa) initn: 861 init1: 377 opt: 845 Z-score: 1077.4 bits: 207.5 E(85289): 2.8e-53 Smith-Waterman score: 845; 44.6% identity (75.4% similar) in 280 aa overlap (34-307:20-294) 10 20 30 40 50 60 pF1KE3 LDSEPGSVLNVVSTALNDTVEFYRWTWSIADKRVENWPLMRSPWPTLSISTLYLLFVWLG : ::..: :. . ::. :..:::.:::: NP_001 MEHFDASLSTYFKALLGPRDTRVKGWFLLDNYIPTFICSVIYLLIVWLG 10 20 30 40 70 80 90 100 110 120 pF1KE3 PKWMKDREPFQMRLVLIIYNFGMVLLNLFIFRELFMGSYNAGYSYICQSVDYSNNVHEVR ::.:....::. : .:..::.:..::.:..: :: : ... :...::.. ... ... NP_001 PKYMRNKQPFSCRGILVVYNLGLTLLSLYMFCELVTGVWEGKYNFFCQGTRTAGE-SDMK 50 60 70 80 90 100 130 140 150 160 170 180 pF1KE3 IAAALWWYFVSKGVEYLDTVFFILRKKNNQVSFLHVYHHCTMFTLWWIGIKWVAGGQAFF : .::::. :: .:..:: ::::::.:.:.. :::::: .:...::. ..:: :...: NP_001 IIRVLWWYYFSKLIEFMDTFFFILRKNNHQITVLHVYHHASMLNIWWFVMNWVPCGHSYF 110 120 130 140 150 160 190 200 210 220 230 240 pF1KE3 GAQLNSFIHVIMYSYYGLTAFGPWIQKYLWWKRYLTMLQLIQFHVTIGHTALSLYTDCPF :: :::::::.:::::::.. : .. :::::.:.:. ::.:: .:: .:. .. : : NP_001 GATLNSFIHVLMYSYYGLSSV-PSMRPYLWWKKYITQGQLLQFVLTIIQTSCGVIWPCTF 170 180 190 200 210 220 250 260 270 280 290 pF1KE3 P-KWMHWALIAYAISFIFLFLNFYIRTYKEP---KKPKAGKTAMNGISA--NGVSKSEKQ : :... :.: ::.: :: ::::.::.. .. : .:: : :: ..: . NP_001 PLGWLYFQ-IGYMISLIALFTNFYIQTYNKKGASRRKDHLKDHQNGSMAAVNGHTNSFSP 230 240 250 260 270 280 300 310 pF1KE3 LMIENGKKQKNGKAKGD : ::. : . NP_001 L--ENNVKPRKLRKD 290 >>NP_068586 (OMIM: 611805,615957) elongation of very lon (299 aa) initn: 861 init1: 377 opt: 845 Z-score: 1077.4 bits: 207.5 E(85289): 2.8e-53 Smith-Waterman score: 845; 44.6% identity (75.4% similar) in 280 aa overlap (34-307:20-294) 10 20 30 40 50 60 pF1KE3 LDSEPGSVLNVVSTALNDTVEFYRWTWSIADKRVENWPLMRSPWPTLSISTLYLLFVWLG : ::..: :. . ::. :..:::.:::: NP_068 MEHFDASLSTYFKALLGPRDTRVKGWFLLDNYIPTFICSVIYLLIVWLG 10 20 30 40 70 80 90 100 110 120 pF1KE3 PKWMKDREPFQMRLVLIIYNFGMVLLNLFIFRELFMGSYNAGYSYICQSVDYSNNVHEVR ::.:....::. : .:..::.:..::.:..: :: : ... :...::.. ... ... NP_068 PKYMRNKQPFSCRGILVVYNLGLTLLSLYMFCELVTGVWEGKYNFFCQGTRTAGE-SDMK 50 60 70 80 90 100 130 140 150 160 170 180 pF1KE3 IAAALWWYFVSKGVEYLDTVFFILRKKNNQVSFLHVYHHCTMFTLWWIGIKWVAGGQAFF : .::::. :: .:..:: ::::::.:.:.. :::::: .:...::. ..:: :...: NP_068 IIRVLWWYYFSKLIEFMDTFFFILRKNNHQITVLHVYHHASMLNIWWFVMNWVPCGHSYF 110 120 130 140 150 160 190 200 210 220 230 240 pF1KE3 GAQLNSFIHVIMYSYYGLTAFGPWIQKYLWWKRYLTMLQLIQFHVTIGHTALSLYTDCPF :: :::::::.:::::::.. : .. :::::.:.:. ::.:: .:: .:. .. : : NP_068 GATLNSFIHVLMYSYYGLSSV-PSMRPYLWWKKYITQGQLLQFVLTIIQTSCGVIWPCTF 170 180 190 200 210 220 250 260 270 280 290 pF1KE3 P-KWMHWALIAYAISFIFLFLNFYIRTYKEP---KKPKAGKTAMNGISA--NGVSKSEKQ : :... :.: ::.: :: ::::.::.. .. : .:: : :: ..: . NP_068 PLGWLYFQ-IGYMISLIALFTNFYIQTYNKKGASRRKDHLKDHQNGSMAAVNGHTNSFSP 230 240 250 260 270 280 300 310 pF1KE3 LMIENGKKQKNGKAKGD : ::. : . NP_068 L--ENNVKPRKLRKD 290 >>XP_016865374 (OMIM: 614451) PREDICTED: elongation of v (281 aa) initn: 832 init1: 710 opt: 821 Z-score: 1047.3 bits: 201.8 E(85289): 1.3e-51 Smith-Waterman score: 821; 45.8% identity (71.1% similar) in 273 aa overlap (22-289:10-278) 10 20 30 40 50 pF1KE3 MGLLDSEPGSVLNVVSTALNDTVEFY-RWTWSIADKRVENWPLMRSPWPTLSISTLYLLF ::..: : . :: :::.: :: :: : . .:. : XP_016 MAFSDLTSRTVHLYDNWIKD-ADPRVEDWLLMSSPLPQTILLGFYVYF 10 20 30 40 60 70 80 90 100 110 pF1KE3 VW-LGPKWMKDREPFQMRLVLIIYNFGMVLLNLFIFRELFMGSYNAGYSYICQSVDYSNN : :::: :..:.::... ..: ::: .::..... :. :.... :::. :. :::: . XP_016 VTSLGPKLMENRKPFELKKAMITYNFFIVLFSVYMCYEFVMSGWGIGYSFRCDIVDYSRS 50 60 70 80 90 100 120 130 140 150 160 170 pF1KE3 VHEVRIAAALWWYFVSKGVEYLDTVFFILRKKNNQVSFLHVYHHCTMFTLWWIGIKWVAG .:.: . : :. :: .: :::.::.:::::.::.::::.:: : ::.:.:..:: XP_016 PTALRMARTCWLYYFSKFIELLDTIFFVLRKKNSQVTFLHVFHHTIMPWTWWFGVKFAAG 110 120 130 140 150 160 180 190 200 210 220 230 pF1KE3 GQAFFGAQLNSFIHVIMYSYYGLTAFGPWIQKYLWWKRYLTMLQLIQFHVTIGHTALSLY : . : : ::. .::.:::::::.:.:: :::::::.::: :::.:: .. : . .. XP_016 GLGTFHALLNTAVHVVMYSYYGLSALGPAYQKYLWWKKYLTSLQLVQFVIVAIHISQFFF 170 180 190 200 210 220 240 250 260 270 280 290 pF1KE3 T-DCP--FPKWMHWALIAYAISFIFLFLNFYIRTYKEPKKPKAGKTAMNGISANGVSKSE :: :: . ...:.. :..:::.:. :.: : . ::. :: : XP_016 MEDCKYQFPVFAC-IIMSYSFMFLLLFLHFWYRAY--TKGQRLPKTVKNGTCKNKDN 230 240 250 260 270 280 300 310 pF1KE3 KQLMIENGKKQKNGKAKGD >>NP_079206 (OMIM: 614451) elongation of very long chain (281 aa) initn: 832 init1: 710 opt: 821 Z-score: 1047.3 bits: 201.8 E(85289): 1.3e-51 Smith-Waterman score: 821; 45.8% identity (71.1% similar) in 273 aa overlap (22-289:10-278) 10 20 30 40 50 pF1KE3 MGLLDSEPGSVLNVVSTALNDTVEFY-RWTWSIADKRVENWPLMRSPWPTLSISTLYLLF ::..: : . :: :::.: :: :: : . .:. : NP_079 MAFSDLTSRTVHLYDNWIKD-ADPRVEDWLLMSSPLPQTILLGFYVYF 10 20 30 40 60 70 80 90 100 110 pF1KE3 VW-LGPKWMKDREPFQMRLVLIIYNFGMVLLNLFIFRELFMGSYNAGYSYICQSVDYSNN : :::: :..:.::... ..: ::: .::..... :. :.... :::. :. :::: . NP_079 VTSLGPKLMENRKPFELKKAMITYNFFIVLFSVYMCYEFVMSGWGIGYSFRCDIVDYSRS 50 60 70 80 90 100 120 130 140 150 160 170 pF1KE3 VHEVRIAAALWWYFVSKGVEYLDTVFFILRKKNNQVSFLHVYHHCTMFTLWWIGIKWVAG .:.: . : :. :: .: :::.::.:::::.::.::::.:: : ::.:.:..:: NP_079 PTALRMARTCWLYYFSKFIELLDTIFFVLRKKNSQVTFLHVFHHTIMPWTWWFGVKFAAG 110 120 130 140 150 160 180 190 200 210 220 230 pF1KE3 GQAFFGAQLNSFIHVIMYSYYGLTAFGPWIQKYLWWKRYLTMLQLIQFHVTIGHTALSLY : . : : ::. .::.:::::::.:.:: :::::::.::: :::.:: .. : . .. NP_079 GLGTFHALLNTAVHVVMYSYYGLSALGPAYQKYLWWKKYLTSLQLVQFVIVAIHISQFFF 170 180 190 200 210 220 240 250 260 270 280 290 pF1KE3 T-DCP--FPKWMHWALIAYAISFIFLFLNFYIRTYKEPKKPKAGKTAMNGISANGVSKSE :: :: . ...:.. :..:::.:. :.: : . ::. :: : NP_079 MEDCKYQFPVFAC-IIMSYSFMFLLLFLHFWYRAY--TKGQRLPKTVKNGTCKNKDN 230 240 250 260 270 280 300 310 pF1KE3 KQLMIENGKKQKNGKAKGD >>XP_005248663 (OMIM: 614451) PREDICTED: elongation of v (281 aa) initn: 832 init1: 710 opt: 821 Z-score: 1047.3 bits: 201.8 E(85289): 1.3e-51 Smith-Waterman score: 821; 45.8% identity (71.1% similar) in 273 aa overlap (22-289:10-278) 10 20 30 40 50 pF1KE3 MGLLDSEPGSVLNVVSTALNDTVEFY-RWTWSIADKRVENWPLMRSPWPTLSISTLYLLF ::..: : . :: :::.: :: :: : . .:. : XP_005 MAFSDLTSRTVHLYDNWIKD-ADPRVEDWLLMSSPLPQTILLGFYVYF 10 20 30 40 60 70 80 90 100 110 pF1KE3 VW-LGPKWMKDREPFQMRLVLIIYNFGMVLLNLFIFRELFMGSYNAGYSYICQSVDYSNN : :::: :..:.::... ..: ::: .::..... :. :.... :::. :. :::: . XP_005 VTSLGPKLMENRKPFELKKAMITYNFFIVLFSVYMCYEFVMSGWGIGYSFRCDIVDYSRS 50 60 70 80 90 100 120 130 140 150 160 170 pF1KE3 VHEVRIAAALWWYFVSKGVEYLDTVFFILRKKNNQVSFLHVYHHCTMFTLWWIGIKWVAG .:.: . : :. :: .: :::.::.:::::.::.::::.:: : ::.:.:..:: XP_005 PTALRMARTCWLYYFSKFIELLDTIFFVLRKKNSQVTFLHVFHHTIMPWTWWFGVKFAAG 110 120 130 140 150 160 180 190 200 210 220 230 pF1KE3 GQAFFGAQLNSFIHVIMYSYYGLTAFGPWIQKYLWWKRYLTMLQLIQFHVTIGHTALSLY : . : : ::. .::.:::::::.:.:: :::::::.::: :::.:: .. : . .. XP_005 GLGTFHALLNTAVHVVMYSYYGLSALGPAYQKYLWWKKYLTSLQLVQFVIVAIHISQFFF 170 180 190 200 210 220 240 250 260 270 280 290 pF1KE3 T-DCP--FPKWMHWALIAYAISFIFLFLNFYIRTYKEPKKPKAGKTAMNGISANGVSKSE :: :: . ...:.. :..:::.:. :.: : . ::. :: : XP_005 MEDCKYQFPVFAC-IIMSYSFMFLLLFLHFWYRAY--TKGQRLPKTVKNGTCKNKDN 230 240 250 260 270 280 300 310 pF1KE3 KQLMIENGKKQKNGKAKGD >>NP_001098028 (OMIM: 614451) elongation of very long ch (281 aa) initn: 832 init1: 710 opt: 821 Z-score: 1047.3 bits: 201.8 E(85289): 1.3e-51 Smith-Waterman score: 821; 45.8% identity (71.1% similar) in 273 aa overlap (22-289:10-278) 10 20 30 40 50 pF1KE3 MGLLDSEPGSVLNVVSTALNDTVEFY-RWTWSIADKRVENWPLMRSPWPTLSISTLYLLF ::..: : . :: :::.: :: :: : . .:. : NP_001 MAFSDLTSRTVHLYDNWIKD-ADPRVEDWLLMSSPLPQTILLGFYVYF 10 20 30 40 60 70 80 90 100 110 pF1KE3 VW-LGPKWMKDREPFQMRLVLIIYNFGMVLLNLFIFRELFMGSYNAGYSYICQSVDYSNN : :::: :..:.::... ..: ::: .::..... :. :.... :::. :. :::: . NP_001 VTSLGPKLMENRKPFELKKAMITYNFFIVLFSVYMCYEFVMSGWGIGYSFRCDIVDYSRS 50 60 70 80 90 100 120 130 140 150 160 170 pF1KE3 VHEVRIAAALWWYFVSKGVEYLDTVFFILRKKNNQVSFLHVYHHCTMFTLWWIGIKWVAG .:.: . : :. :: .: :::.::.:::::.::.::::.:: : ::.:.:..:: NP_001 PTALRMARTCWLYYFSKFIELLDTIFFVLRKKNSQVTFLHVFHHTIMPWTWWFGVKFAAG 110 120 130 140 150 160 180 190 200 210 220 230 pF1KE3 GQAFFGAQLNSFIHVIMYSYYGLTAFGPWIQKYLWWKRYLTMLQLIQFHVTIGHTALSLY : . : : ::. .::.:::::::.:.:: :::::::.::: :::.:: .. : . .. NP_001 GLGTFHALLNTAVHVVMYSYYGLSALGPAYQKYLWWKKYLTSLQLVQFVIVAIHISQFFF 170 180 190 200 210 220 240 250 260 270 280 290 pF1KE3 T-DCP--FPKWMHWALIAYAISFIFLFLNFYIRTYKEPKKPKAGKTAMNGISANGVSKSE :: :: . ...:.. :..:::.:. :.: : . ::. :: : NP_001 MEDCKYQFPVFAC-IIMSYSFMFLLLFLHFWYRAY--TKGQRLPKTVKNGTCKNKDN 230 240 250 260 270 280 300 310 pF1KE3 KQLMIENGKKQKNGKAKGD 314 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 17:38:10 2016 done: Mon Nov 7 17:38:11 2016 Total Scan time: 6.530 Total Display time: 0.010 Function used was FASTA [36.3.4 Apr, 2011]