FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5215, 241 aa 1>>>pF1KE5215 241 - 241 aa - 241 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.0294+/-0.000592; mu= 12.2237+/- 0.036 mean_var=82.8784+/-16.160, 0's: 0 Z-trim(113.7): 17 B-trim: 22 in 1/52 Lambda= 0.140881 statistics sampled from 14303 (14320) to 14303 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.783), E-opt: 0.2 (0.44), width: 16 Scan time: 2.060 The best scores are: opt bits E(32554) CCDS254.1 RCAN3 gene_id:11123|Hs108|chr1 ( 241) 1617 337.3 5.5e-93 CCDS59023.1 RCAN2 gene_id:10231|Hs108|chr6 ( 243) 942 200.1 1.1e-51 CCDS43469.1 RCAN2 gene_id:10231|Hs108|chr6 ( 197) 852 181.8 3e-46 CCDS57979.1 RCAN3 gene_id:11123|Hs108|chr1 ( 231) 825 176.3 1.5e-44 CCDS57980.1 RCAN3 gene_id:11123|Hs108|chr1 ( 173) 819 175.0 2.8e-44 CCDS57981.1 RCAN3 gene_id:11123|Hs108|chr1 ( 183) 812 173.6 7.8e-44 CCDS72730.1 RCAN3 gene_id:11123|Hs108|chr1 ( 116) 793 169.7 7.7e-43 CCDS13637.1 RCAN1 gene_id:1827|Hs108|chr21 ( 252) 774 166.0 2.2e-41 CCDS33551.1 RCAN1 gene_id:1827|Hs108|chr21 ( 197) 758 162.7 1.7e-40 CCDS74788.1 RCAN1 gene_id:1827|Hs108|chr21 ( 277) 728 156.6 1.5e-38 CCDS74790.1 RCAN1 gene_id:1827|Hs108|chr21 ( 171) 716 154.1 5.5e-38 CCDS82668.1 RCAN1 gene_id:1827|Hs108|chr21 ( 205) 570 124.5 5.5e-29 CCDS42921.1 RCAN1 gene_id:1827|Hs108|chr21 ( 117) 505 111.1 3.3e-25 CCDS57982.1 RCAN3 gene_id:11123|Hs108|chr1 ( 115) 450 99.9 7.4e-22 >>CCDS254.1 RCAN3 gene_id:11123|Hs108|chr1 (241 aa) initn: 1617 init1: 1617 opt: 1617 Z-score: 1782.8 bits: 337.3 E(32554): 5.5e-93 Smith-Waterman score: 1617; 100.0% identity (100.0% similar) in 241 aa overlap (1-241:1-241) 10 20 30 40 50 60 pF1KE5 MLRDTMKSWNDSQSDLCSTDQEEEEEMIFGENEDDLDEMMDLSDLPTSLFACSVHEAVFE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS25 MLRDTMKSWNDSQSDLCSTDQEEEEEMIFGENEDDLDEMMDLSDLPTSLFACSVHEAVFE 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 AREQKERFEALFTIYDDQVTFQLFKSFRRVRINFSKPEAAARARIELHETDFNGQKLKLY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS25 AREQKERFEALFTIYDDQVTFQLFKSFRRVRINFSKPEAAARARIELHETDFNGQKLKLY 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 FAQVQMSGEVRDKSYLLPPQPVKQFLISPPASPPVGWKQSEDAMPVINYDLLCAVSKLGP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS25 FAQVQMSGEVRDKSYLLPPQPVKQFLISPPASPPVGWKQSEDAMPVINYDLLCAVSKLGP 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 GEKYELHAGTESTPSVVVHVCESETEEEEETKNPKQKIAQTRRPDPPTAALNEPQTFDCA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS25 GEKYELHAGTESTPSVVVHVCESETEEEEETKNPKQKIAQTRRPDPPTAALNEPQTFDCA 190 200 210 220 230 240 pF1KE5 L : CCDS25 L >>CCDS59023.1 RCAN2 gene_id:10231|Hs108|chr6 (243 aa) initn: 856 init1: 856 opt: 942 Z-score: 1041.3 bits: 200.1 E(32554): 1.1e-51 Smith-Waterman score: 942; 66.4% identity (83.4% similar) in 217 aa overlap (16-230:28-242) 10 20 30 40 pF1KE5 MLRDTMKSWNDSQSDLCSTDQEEEEEMIFGENEDDLDEMMDLSDLPTS :: :.. :.: . .. . :..:::.: CCDS59 MRGESYFIGMRSPGQQGHVPEDGGLFLLCCIDRDWAVTRCFAE--EAFQAITDFNDLPNS 10 20 30 40 50 50 60 70 80 90 100 pF1KE5 LFACSVHEAVFEAREQKERFEALFTIYDDQVTFQLFKSFRRVRINFSKPEAAARARIELH ::::.::..:::..:.::.::.:: ::: :::::::::::::::::.:..::::::::: CCDS59 LFACNVHQSVFEGEESKEKFEGLFRTYDDCVTFQLFKSFRRVRINFSNPKSAARARIELH 60 70 80 90 100 110 110 120 130 140 150 160 pF1KE5 ETDFNGQKLKLYFAQVQMSGEVRDKSYLLPPQPVKQFLISPPASPPVGWKQSEDAMPVIN ::.: :.:::::::::: :: .: ::::.::::::::.::::::. .:: ::.: CCDS59 ETQFRGKKLKLYFAQVQTPETDGDKLHLAPPQPAKQFLISPPSSPPVGWQPINDATPVLN 120 130 140 150 160 170 170 180 190 200 210 220 pF1KE5 YDLLCAVSKLGPGEKYELHAGTESTPSVVVHVCESETEEEEETK-NPKQKIAQTRRPD-P :::: ::.:::::::::::::::::::::::::.:. ::::. : .:: :: ::::: : CCDS59 YDLLYAVAKLGPGEKYELHAGTESTPSVVVHVCDSDIEEEEDPKTSPKPKIIQTRRPGLP 180 190 200 210 220 230 230 240 pF1KE5 PTAALNEPQTFDCAL :... CCDS59 PSVSN 240 >>CCDS43469.1 RCAN2 gene_id:10231|Hs108|chr6 (197 aa) initn: 784 init1: 784 opt: 852 Z-score: 943.9 bits: 181.8 E(32554): 3e-46 Smith-Waterman score: 852; 70.4% identity (83.3% similar) in 186 aa overlap (47-230:11-196) 20 30 40 50 60 70 pF1KE5 CSTDQEEEEEMIFGENEDDLDEMMDLSDLPTSLFACSVHEAVFEAREQKERFEALFTIYD ..: :: : :: .: ::.::.:: :: CCDS43 MPAPSMDCDVSTLVACVVDVEVFTNQEVKEKFEGLFRTYD 10 20 30 40 80 90 100 110 120 130 pF1KE5 DQVTFQLFKSFRRVRINFSKPEAAARARIELHETDFNGQKLKLYFAQVQMSGEVRDKSYL : :::::::::::::::::.:..:::::::::::.: :.:::::::::: :: .: CCDS43 DCVTFQLFKSFRRVRINFSNPKSAARARIELHETQFRGKKLKLYFAQVQTPETDGDKLHL 50 60 70 80 90 100 140 150 160 170 180 190 pF1KE5 LPPQPVKQFLISPPASPPVGWKQSEDAMPVINYDLLCAVSKLGPGEKYELHAGTESTPSV ::::.::::::::.::::::. .:: ::.::::: ::.:::::::::::::::::::: CCDS43 APPQPAKQFLISPPSSPPVGWQPINDATPVLNYDLLYAVAKLGPGEKYELHAGTESTPSV 110 120 130 140 150 160 200 210 220 230 240 pF1KE5 VVHVCESETEEEEETK-NPKQKIAQTRRPD-PPTAALNEPQTFDCAL :::::.:. ::::. : .:: :: ::::: ::... CCDS43 VVHVCDSDIEEEEDPKTSPKPKIIQTRRPGLPPSVSN 170 180 190 >>CCDS57979.1 RCAN3 gene_id:11123|Hs108|chr1 (231 aa) initn: 822 init1: 822 opt: 825 Z-score: 913.2 bits: 176.3 E(32554): 1.5e-44 Smith-Waterman score: 1523; 95.9% identity (95.9% similar) in 241 aa overlap (1-241:1-231) 10 20 30 40 50 60 pF1KE5 MLRDTMKSWNDSQSDLCSTDQEEEEEMIFGENEDDLDEMMDLSDLPTSLFACSVHEAVFE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS57 MLRDTMKSWNDSQSDLCSTDQEEEEEMIFGENEDDLDEMMDLSDLPTSLFACSVHEAVFE 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 AREQKERFEALFTIYDDQVTFQLFKSFRRVRINFSKPEAAARARIELHETDFNGQKLKLY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS57 AREQKERFEALFTIYDDQVTFQLFKSFRRVRINFSKPEAAARARIELHETDFNGQKLKLY 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 FAQVQMSGEVRDKSYLLPPQPVKQFLISPPASPPVGWKQSEDAMPVINYDLLCAVSKLGP ::: ::::::::::::::::::::::::::::::::::::::::::::::: CCDS57 FAQ----------SYLLPPQPVKQFLISPPASPPVGWKQSEDAMPVINYDLLCAVSKLGP 130 140 150 160 170 190 200 210 220 230 240 pF1KE5 GEKYELHAGTESTPSVVVHVCESETEEEEETKNPKQKIAQTRRPDPPTAALNEPQTFDCA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS57 GEKYELHAGTESTPSVVVHVCESETEEEEETKNPKQKIAQTRRPDPPTAALNEPQTFDCA 180 190 200 210 220 230 pF1KE5 L : CCDS57 L >>CCDS57980.1 RCAN3 gene_id:11123|Hs108|chr1 (173 aa) initn: 812 init1: 812 opt: 819 Z-score: 908.5 bits: 175.0 E(32554): 2.8e-44 Smith-Waterman score: 819; 93.3% identity (97.0% similar) in 134 aa overlap (1-134:1-134) 10 20 30 40 50 60 pF1KE5 MLRDTMKSWNDSQSDLCSTDQEEEEEMIFGENEDDLDEMMDLSDLPTSLFACSVHEAVFE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS57 MLRDTMKSWNDSQSDLCSTDQEEEEEMIFGENEDDLDEMMDLSDLPTSLFACSVHEAVFE 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 AREQKERFEALFTIYDDQVTFQLFKSFRRVRINFSKPEAAARARIELHETDFNGQKLKLY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS57 AREQKERFEALFTIYDDQVTFQLFKSFRRVRINFSKPEAAARARIELHETDFNGQKLKLY 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 FAQVQMSGEVRDKSYLLPPQPVKQFLISPPASPPVGWKQSEDAMPVINYDLLCAVSKLGP ::: . . .:..: CCDS57 FAQERNMNFTREQSRHPAWWFMSVKVKLKRKKRQKTPNRKLPRRGAPTLRPQR 130 140 150 160 170 >>CCDS57981.1 RCAN3 gene_id:11123|Hs108|chr1 (183 aa) initn: 807 init1: 807 opt: 812 Z-score: 900.4 bits: 173.6 E(32554): 7.8e-44 Smith-Waterman score: 1116; 75.9% identity (75.9% similar) in 241 aa overlap (1-241:1-183) 10 20 30 40 50 60 pF1KE5 MLRDTMKSWNDSQSDLCSTDQEEEEEMIFGENEDDLDEMMDLSDLPTSLFACSVHEAVFE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS57 MLRDTMKSWNDSQSDLCSTDQEEEEEMIFGENEDDLDEMMDLSDLPTSLFACSVHEAVFE 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 AREQKERFEALFTIYDDQVTFQLFKSFRRVRINFSKPEAAARARIELHETDFNGQKLKLY ::::: CCDS57 AREQK------------------------------------------------------- 130 140 150 160 170 180 pF1KE5 FAQVQMSGEVRDKSYLLPPQPVKQFLISPPASPPVGWKQSEDAMPVINYDLLCAVSKLGP ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS57 ---VQMSGEVRDKSYLLPPQPVKQFLISPPASPPVGWKQSEDAMPVINYDLLCAVSKLGP 70 80 90 100 110 120 190 200 210 220 230 240 pF1KE5 GEKYELHAGTESTPSVVVHVCESETEEEEETKNPKQKIAQTRRPDPPTAALNEPQTFDCA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS57 GEKYELHAGTESTPSVVVHVCESETEEEEETKNPKQKIAQTRRPDPPTAALNEPQTFDCA 130 140 150 160 170 180 pF1KE5 L : CCDS57 L >>CCDS72730.1 RCAN3 gene_id:11123|Hs108|chr1 (116 aa) initn: 793 init1: 793 opt: 793 Z-score: 882.6 bits: 169.7 E(32554): 7.7e-43 Smith-Waterman score: 793; 100.0% identity (100.0% similar) in 116 aa overlap (126-241:1-116) 100 110 120 130 140 150 pF1KE5 KPEAAARARIELHETDFNGQKLKLYFAQVQMSGEVRDKSYLLPPQPVKQFLISPPASPPV :::::::::::::::::::::::::::::: CCDS72 MSGEVRDKSYLLPPQPVKQFLISPPASPPV 10 20 30 160 170 180 190 200 210 pF1KE5 GWKQSEDAMPVINYDLLCAVSKLGPGEKYELHAGTESTPSVVVHVCESETEEEEETKNPK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS72 GWKQSEDAMPVINYDLLCAVSKLGPGEKYELHAGTESTPSVVVHVCESETEEEEETKNPK 40 50 60 70 80 90 220 230 240 pF1KE5 QKIAQTRRPDPPTAALNEPQTFDCAL :::::::::::::::::::::::::: CCDS72 QKIAQTRRPDPPTAALNEPQTFDCAL 100 110 >>CCDS13637.1 RCAN1 gene_id:1827|Hs108|chr21 (252 aa) initn: 816 init1: 428 opt: 774 Z-score: 856.6 bits: 166.0 E(32554): 2.2e-41 Smith-Waterman score: 774; 61.7% identity (78.8% similar) in 193 aa overlap (38-225:57-245) 10 20 30 40 50 60 pF1KE5 SWNDSQSDLCSTDQEEEEEMIFGENEDDLDEMMDLSDLPTSLFACSVHEAVFEAREQKER : .::.:::.. .:: . :: . . CCDS13 GVTLRPFAPLSGAAEADEGGGDWSFIDCEMEEVDLQDLPSATIACHLDPRVFVDGLCRAK 30 40 50 60 70 80 70 80 90 100 110 120 pF1KE5 FEALFTIYDDQVTFQLFKSFRRVRINFSKPEAAARARIELHETDFNGQKLKLYFAQVQMS ::.:: :: ..::: ::::.:::::::.: .:: ::..::.:.: :...::::::. CCDS13 FESLFRTYDKDITFQYFKSFKRVRINFSNPFSAADARLQLHKTEFLGKEMKLYFAQTLHI 90 100 110 120 130 140 130 140 150 160 170 180 pF1KE5 GEVRDKSYLLPPQPVKQFLISPPASPPVGWKQSEDAMPVINYDLLCAVSKLGPGEKYELH : .:.: ::.: ::::::::::::::::: ::: :::::::: :.:::::::::::: CCDS13 G----SSHLAPPNPDKQFLISPPASPPVGWKQVEDATPVINYDLLYAISKLGPGEKYELH 150 160 170 180 190 200 190 200 210 220 230 240 pF1KE5 AGTESTPSVVVHVCESETEEEEET-----KNPKQKIAQTRRPDPPTAALNEPQTFDCAL :.:..:::::::::::. :.::: . :: :: :::::. CCDS13 AATDTTPSVVVHVCESDQEKEEEEEMERMRRPKPKIIQTRRPEYTPIHLS 210 220 230 240 250 >>CCDS33551.1 RCAN1 gene_id:1827|Hs108|chr21 (197 aa) initn: 800 init1: 428 opt: 758 Z-score: 840.6 bits: 162.7 E(32554): 1.7e-40 Smith-Waterman score: 758; 62.5% identity (79.9% similar) in 184 aa overlap (47-225:11-190) 20 30 40 50 60 70 pF1KE5 CSTDQEEEEEMIFGENEDDLDEMMDLSDLPTSLFACSVHEAVFEAREQKERFEALFTIYD .::.:: .. .: : . .::.:: :: CCDS33 MHFRNFNYSFSSLIACVANSDIFSESETRAKFESLFRTYD 10 20 30 40 80 90 100 110 120 130 pF1KE5 DQVTFQLFKSFRRVRINFSKPEAAARARIELHETDFNGQKLKLYFAQVQMSGEVRDKSYL ..::: ::::.:::::::.: .:: ::..::.:.: :...::::::. : .:.: CCDS33 KDITFQYFKSFKRVRINFSNPFSAADARLQLHKTEFLGKEMKLYFAQTLHIG----SSHL 50 60 70 80 90 140 150 160 170 180 190 pF1KE5 LPPQPVKQFLISPPASPPVGWKQSEDAMPVINYDLLCAVSKLGPGEKYELHAGTESTPSV ::.: ::::::::::::::::: ::: :::::::: :.:::::::::::::.:..:::: CCDS33 APPNPDKQFLISPPASPPVGWKQVEDATPVINYDLLYAISKLGPGEKYELHAATDTTPSV 100 110 120 130 140 150 200 210 220 230 240 pF1KE5 VVHVCESETEEEEET-----KNPKQKIAQTRRPDPPTAALNEPQTFDCAL :::::::. :.::: . :: :: :::::. CCDS33 VVHVCESDQEKEEEEEMERMRRPKPKIIQTRRPEYTPIHLS 160 170 180 190 >>CCDS74788.1 RCAN1 gene_id:1827|Hs108|chr21 (277 aa) initn: 767 init1: 428 opt: 728 Z-score: 805.4 bits: 156.6 E(32554): 1.5e-38 Smith-Waterman score: 729; 61.7% identity (77.7% similar) in 188 aa overlap (43-225:94-270) 20 30 40 50 60 70 pF1KE5 QSDLCSTDQEEEEEMIFGENEDDLDEMMDLSDLPTSLFACSVHEAVFEAREQKERFEALF :.:: . :. : : .: .::.:: CCDS74 QPHVEQASTSASPRLLAVNIPEDTLLSYPESSLPLQRH-CAFH------RFSKAKFESLF 70 80 90 100 110 80 90 100 110 120 130 pF1KE5 TIYDDQVTFQLFKSFRRVRINFSKPEAAARARIELHETDFNGQKLKLYFAQVQMSGEVRD :: ..::: ::::.:::::::.: .:: ::..::.:.: :...::::::. : CCDS74 RTYDKDITFQYFKSFKRVRINFSNPFSAADARLQLHKTEFLGKEMKLYFAQTLHIG---- 120 130 140 150 160 170 140 150 160 170 180 190 pF1KE5 KSYLLPPQPVKQFLISPPASPPVGWKQSEDAMPVINYDLLCAVSKLGPGEKYELHAGTES .:.: ::.: ::::::::::::::::: ::: :::::::: :.:::::::::::::.:.. CCDS74 SSHLAPPNPDKQFLISPPASPPVGWKQVEDATPVINYDLLYAISKLGPGEKYELHAATDT 180 190 200 210 220 230 200 210 220 230 240 pF1KE5 TPSVVVHVCESETEEEEET-----KNPKQKIAQTRRPDPPTAALNEPQTFDCAL :::::::::::. :.::: . :: :: :::::. CCDS74 TPSVVVHVCESDQEKEEEEEMERMRRPKPKIIQTRRPEYTPIHLS 240 250 260 270 241 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 22:34:55 2016 done: Mon Nov 7 22:34:55 2016 Total Scan time: 2.060 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]