FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1108, 103 aa 1>>>pF1KE1108 103 - 103 aa - 103 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.9795+/-0.000587; mu= 7.4185+/- 0.036 mean_var=82.0428+/-15.932, 0's: 0 Z-trim(113.6): 10 B-trim: 0 in 0/50 Lambda= 0.141597 statistics sampled from 14230 (14239) to 14230 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.793), E-opt: 0.2 (0.437), width: 16 Scan time: 1.370 The best scores are: opt bits E(32554) CCDS44006.1 SPANXB1 gene_id:728695|Hs108|chrX ( 103) 668 144.7 9.7e-36 CCDS14674.1 SPANXA1 gene_id:30014|Hs108|chrX ( 97) 507 111.8 7.3e-26 CCDS44007.1 SPANXA2 gene_id:728712|Hs108|chrX ( 97) 507 111.8 7.3e-26 CCDS14673.1 SPANXC gene_id:64663|Hs108|chrX ( 97) 488 107.9 1.1e-24 CCDS14675.1 SPANXD gene_id:64648|Hs108|chrX ( 97) 477 105.7 5.1e-24 >>CCDS44006.1 SPANXB1 gene_id:728695|Hs108|chrX (103 aa) initn: 668 init1: 668 opt: 668 Z-score: 755.2 bits: 144.7 E(32554): 9.7e-36 Smith-Waterman score: 668; 99.0% identity (100.0% similar) in 103 aa overlap (1-103:1-103) 10 20 30 40 50 60 pF1KE1 MGQQSSVRRLKRSVPCESNEANEANEANKTMPETPTGDSDPQPAPKKMKTSESSTILVVR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 MGQQSSVRRLKRSVPCESNEANEANEANKTMPETPTGDSDPQPAPKKMKTSESSTILVVR 10 20 30 40 50 60 70 80 90 100 pF1KE1 YRRNVKRTSPEELVNDHARENRINPDQMEEEEFIEITTERPKK :::::::::::::.::::::::::::::::::::::::::::: CCDS44 YRRNVKRTSPEELLNDHARENRINPDQMEEEEFIEITTERPKK 70 80 90 100 >>CCDS14674.1 SPANXA1 gene_id:30014|Hs108|chrX (97 aa) initn: 544 init1: 451 opt: 507 Z-score: 577.8 bits: 111.8 E(32554): 7.3e-26 Smith-Waterman score: 507; 78.6% identity (85.4% similar) in 103 aa overlap (1-103:1-97) 10 20 30 40 50 60 pF1KE1 MGQQSSVRRLKRSVPCESNEANEANEANKTMPETPTGDSDPQPAPKKMKTSESSTILVVR : .:::. .::::::.:::::: :::::::::::::::::::::::::::::: CCDS14 MDKQSSAGGVKRSVPCDSNEANEM------MPETPTGDSDPQPAPKKMKTSESSTILVVR 10 20 30 40 50 70 80 90 100 pF1KE1 YRRNVKRTSPEELVNDHARENRINPDQMEEEEFIEITTERPKK :::: ::::::::.::::::::::: :::::::.:: .: : : CCDS14 YRRNFKRTSPEELLNDHARENRINPLQMEEEEFMEIMVEIPAK 60 70 80 90 >>CCDS44007.1 SPANXA2 gene_id:728712|Hs108|chrX (97 aa) initn: 544 init1: 451 opt: 507 Z-score: 577.8 bits: 111.8 E(32554): 7.3e-26 Smith-Waterman score: 507; 78.6% identity (85.4% similar) in 103 aa overlap (1-103:1-97) 10 20 30 40 50 60 pF1KE1 MGQQSSVRRLKRSVPCESNEANEANEANKTMPETPTGDSDPQPAPKKMKTSESSTILVVR : .:::. .::::::.:::::: :::::::::::::::::::::::::::::: CCDS44 MDKQSSAGGVKRSVPCDSNEANEM------MPETPTGDSDPQPAPKKMKTSESSTILVVR 10 20 30 40 50 70 80 90 100 pF1KE1 YRRNVKRTSPEELVNDHARENRINPDQMEEEEFIEITTERPKK :::: ::::::::.::::::::::: :::::::.:: .: : : CCDS44 YRRNFKRTSPEELLNDHARENRINPLQMEEEEFMEIMVEIPAK 60 70 80 90 >>CCDS14673.1 SPANXC gene_id:64663|Hs108|chrX (97 aa) initn: 530 init1: 432 opt: 488 Z-score: 556.8 bits: 107.9 E(32554): 1.1e-24 Smith-Waterman score: 488; 76.7% identity (84.5% similar) in 103 aa overlap (1-103:1-97) 10 20 30 40 50 60 pF1KE1 MGQQSSVRRLKRSVPCESNEANEANEANKTMPETPTGDSDPQPAPKKMKTSESSTILVVR : .:::. .::::::.:::::: :::: .: :::::::::.:::::::::::: CCDS14 MDKQSSAGGVKRSVPCDSNEANEM------MPETSSGYSDPQPAPKKLKTSESSTILVVR 10 20 30 40 50 70 80 90 100 pF1KE1 YRRNVKRTSPEELVNDHARENRINPDQMEEEEFIEITTERPKK ::::::::::::::::::::::::: :::::::.:: .: : : CCDS14 YRRNVKRTSPEELVNDHARENRINPLQMEEEEFMEIMVEIPAK 60 70 80 90 >>CCDS14675.1 SPANXD gene_id:64648|Hs108|chrX (97 aa) initn: 519 init1: 421 opt: 477 Z-score: 544.7 bits: 105.7 E(32554): 5.1e-24 Smith-Waterman score: 477; 74.8% identity (83.5% similar) in 103 aa overlap (1-103:1-97) 10 20 30 40 50 60 pF1KE1 MGQQSSVRRLKRSVPCESNEANEANEANKTMPETPTGDSDPQPAPKKMKTSESSTILVVR : .:::. .::::::.:::::: :::: .: :::::::::.:::::::::::: CCDS14 MDKQSSAGGVKRSVPCDSNEANEM------MPETSSGYSDPQPAPKKLKTSESSTILVVR 10 20 30 40 50 70 80 90 100 pF1KE1 YRRNVKRTSPEELVNDHARENRINPDQMEEEEFIEITTERPKK :::: ::::::::::::::.::::: :::::::.:: .: : : CCDS14 YRRNFKRTSPEELVNDHARKNRINPLQMEEEEFMEIMVEIPAK 60 70 80 90 103 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 22:19:00 2016 done: Sun Nov 6 22:19:01 2016 Total Scan time: 1.370 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]