FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1408, 147 aa 1>>>pF1KE1408 147 - 147 aa - 147 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.3431+/-0.00065; mu= 11.1911+/- 0.039 mean_var=58.6725+/-11.777, 0's: 0 Z-trim(109.5): 15 B-trim: 0 in 0/51 Lambda= 0.167439 statistics sampled from 10918 (10928) to 10918 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.735), E-opt: 0.2 (0.336), width: 16 Scan time: 1.800 The best scores are: opt bits E(32554) CCDS2894.1 FHIT gene_id:2272|Hs108|chr3 ( 147) 996 248.3 1.3e-66 >>CCDS2894.1 FHIT gene_id:2272|Hs108|chr3 (147 aa) initn: 996 init1: 996 opt: 996 Z-score: 1309.4 bits: 248.3 E(32554): 1.3e-66 Smith-Waterman score: 996; 100.0% identity (100.0% similar) in 147 aa overlap (1-147:1-147) 10 20 30 40 50 60 pF1KE1 MSFRFGQHLIKPSVVFLKTELSFALVNRKPVVPGHVLVCPLRPVERFHDLRPDEVADLFQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS28 MSFRFGQHLIKPSVVFLKTELSFALVNRKPVVPGHVLVCPLRPVERFHDLRPDEVADLFQ 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 TTQRVGTVVEKHFHGTSLTFSMQDGPEAGQTVKHVHVHVLPRKAGDFHRNDSIYEELQKH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS28 TTQRVGTVVEKHFHGTSLTFSMQDGPEAGQTVKHVHVHVLPRKAGDFHRNDSIYEELQKH 70 80 90 100 110 120 130 140 pF1KE1 DKEDFPASWRSEEEMAAEAAALRVYFQ ::::::::::::::::::::::::::: CCDS28 DKEDFPASWRSEEEMAAEAAALRVYFQ 130 140 147 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 22:23:43 2016 done: Sun Nov 6 22:23:43 2016 Total Scan time: 1.800 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]