FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5202, 205 aa 1>>>pF1KE5202 205 - 205 aa - 205 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 7.4317+/-0.000432; mu= 4.4548+/- 0.027 mean_var=152.9134+/-30.479, 0's: 0 Z-trim(115.0): 5 B-trim: 702 in 2/54 Lambda= 0.103717 statistics sampled from 25183 (25188) to 25183 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.657), E-opt: 0.2 (0.295), width: 16 Scan time: 5.400 The best scores are: opt bits E(85289) NP_115493 (OMIM: 611422) meiotic nuclear division ( 205) 1329 210.2 1.9e-54 XP_016864177 (OMIM: 611422) PREDICTED: meiotic nuc ( 190) 1239 196.7 2e-50 XP_005263332 (OMIM: 611422) PREDICTED: meiotic nuc ( 190) 998 160.7 1.4e-39 NP_001240790 (OMIM: 611422) meiotic nuclear divisi ( 122) 749 123.3 1.7e-28 >>NP_115493 (OMIM: 611422) meiotic nuclear division prot (205 aa) initn: 1329 init1: 1329 opt: 1329 Z-score: 1098.7 bits: 210.2 E(85289): 1.9e-54 Smith-Waterman score: 1329; 100.0% identity (100.0% similar) in 205 aa overlap (1-205:1-205) 10 20 30 40 50 60 pF1KE5 MSKKKGLSAEEKRTRMMEIFSETKDVFQLKDLEKIAPKEKGITAMSVKEVLQSLVDDGMV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_115 MSKKKGLSAEEKRTRMMEIFSETKDVFQLKDLEKIAPKEKGITAMSVKEVLQSLVDDGMV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 DCERIGTSNYYWAFPSKALHARKHKLEVLESQLSEGSQKHASLQKSIEKAKIGRCETEER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_115 DCERIGTSNYYWAFPSKALHARKHKLEVLESQLSEGSQKHASLQKSIEKAKIGRCETEER 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 TRLAKELSSLRDQREQLKAEVEKYKDCDPQVVEEIRQANKVAKEAANRWTDNIFAIKSWA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_115 TRLAKELSSLRDQREQLKAEVEKYKDCDPQVVEEIRQANKVAKEAANRWTDNIFAIKSWA 130 140 150 160 170 180 190 200 pF1KE5 KRKFGFEENKIDRTFGIPEDFDYID ::::::::::::::::::::::::: NP_115 KRKFGFEENKIDRTFGIPEDFDYID 190 200 >>XP_016864177 (OMIM: 611422) PREDICTED: meiotic nuclear (190 aa) initn: 1239 init1: 1239 opt: 1239 Z-score: 1026.3 bits: 196.7 E(85289): 2e-50 Smith-Waterman score: 1239; 100.0% identity (100.0% similar) in 190 aa overlap (16-205:1-190) 10 20 30 40 50 60 pF1KE5 MSKKKGLSAEEKRTRMMEIFSETKDVFQLKDLEKIAPKEKGITAMSVKEVLQSLVDDGMV ::::::::::::::::::::::::::::::::::::::::::::: XP_016 MMEIFSETKDVFQLKDLEKIAPKEKGITAMSVKEVLQSLVDDGMV 10 20 30 40 70 80 90 100 110 120 pF1KE5 DCERIGTSNYYWAFPSKALHARKHKLEVLESQLSEGSQKHASLQKSIEKAKIGRCETEER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 DCERIGTSNYYWAFPSKALHARKHKLEVLESQLSEGSQKHASLQKSIEKAKIGRCETEER 50 60 70 80 90 100 130 140 150 160 170 180 pF1KE5 TRLAKELSSLRDQREQLKAEVEKYKDCDPQVVEEIRQANKVAKEAANRWTDNIFAIKSWA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 TRLAKELSSLRDQREQLKAEVEKYKDCDPQVVEEIRQANKVAKEAANRWTDNIFAIKSWA 110 120 130 140 150 160 190 200 pF1KE5 KRKFGFEENKIDRTFGIPEDFDYID ::::::::::::::::::::::::: XP_016 KRKFGFEENKIDRTFGIPEDFDYID 170 180 190 >>XP_005263332 (OMIM: 611422) PREDICTED: meiotic nuclear (190 aa) initn: 1209 init1: 987 opt: 998 Z-score: 831.4 bits: 160.7 E(85289): 1.4e-39 Smith-Waterman score: 1183; 92.2% identity (92.7% similar) in 205 aa overlap (1-205:1-190) 10 20 30 40 50 60 pF1KE5 MSKKKGLSAEEKRTRMMEIFSETKDVFQLKDLEKIAPKEKGITAMSVKEVLQSLVDDGMV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 MSKKKGLSAEEKRTRMMEIFSETKDVFQLKDLEKIAPKEKGITAMSVKEVLQSLVDDGMV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 DCERIGTSNYYWAFPSKALHARKHKLEVLESQLSEGSQKHASLQKSIEKAKIGRCETEER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 DCERIGTSNYYWAFPSKALHARKHKLEVLESQLSEGSQKHASLQKSIEKAKIGRCETEER 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 TRLAKELSSLRDQREQLKAEVEKYKDCDPQVVEEIRQANKVAKEAANRWTDNIFAIKSWA :::::::::::::::::::::::::::::::::::. ::::::::: XP_005 TRLAKELSSLRDQREQLKAEVEKYKDCDPQVVEEIH---------------NIFAIKSWA 130 140 150 160 190 200 pF1KE5 KRKFGFEENKIDRTFGIPEDFDYID ::::::::::::::::::::::::: XP_005 KRKFGFEENKIDRTFGIPEDFDYID 170 180 190 >>NP_001240790 (OMIM: 611422) meiotic nuclear division p (122 aa) initn: 749 init1: 749 opt: 749 Z-score: 632.7 bits: 123.3 E(85289): 1.7e-28 Smith-Waterman score: 749; 95.9% identity (98.4% similar) in 122 aa overlap (1-122:1-122) 10 20 30 40 50 60 pF1KE5 MSKKKGLSAEEKRTRMMEIFSETKDVFQLKDLEKIAPKEKGITAMSVKEVLQSLVDDGMV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MSKKKGLSAEEKRTRMMEIFSETKDVFQLKDLEKIAPKEKGITAMSVKEVLQSLVDDGMV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 DCERIGTSNYYWAFPSKALHARKHKLEVLESQLSEGSQKHASLQKSIEKAKIGRCETEER ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: .. NP_001 DCERIGTSNYYWAFPSKALHARKHKLEVLESQLSEGSQKHASLQKSIEKAKIGRCETAKQ 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 TRLAKELSSLRDQREQLKAEVEKYKDCDPQVVEEIRQANKVAKEAANRWTDNIFAIKSWA . NP_001 IK 205 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 22:28:29 2016 done: Mon Nov 7 22:28:30 2016 Total Scan time: 5.400 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]