FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3518, 691 aa 1>>>pF1KE3518 691 - 691 aa - 691 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.0205+/-0.000453; mu= 16.8949+/- 0.028 mean_var=101.3056+/-21.161, 0's: 0 Z-trim(112.1): 84 B-trim: 0 in 0/50 Lambda= 0.127426 statistics sampled from 20788 (20860) to 20788 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.606), E-opt: 0.2 (0.245), width: 16 Scan time: 11.060 The best scores are: opt bits E(85289) NP_036293 (OMIM: 605655) F-box/LRR-repeat protein ( 691) 4691 873.8 0 NP_001180463 (OMIM: 605655) F-box/LRR-repeat prote ( 690) 4673 870.5 0 XP_006714022 (OMIM: 605655) PREDICTED: F-box/LRR-r ( 672) 4483 835.5 0 NP_001180464 (OMIM: 605655) F-box/LRR-repeat prote ( 674) 4378 816.2 0 XP_011512133 (OMIM: 605655) PREDICTED: F-box/LRR-r ( 655) 4376 815.8 0 XP_016863508 (OMIM: 605655) PREDICTED: F-box/LRR-r ( 636) 4321 805.7 0 XP_011512134 (OMIM: 605655) PREDICTED: F-box/LRR-r ( 636) 4321 805.7 0 XP_011512135 (OMIM: 605655) PREDICTED: F-box/LRR-r ( 619) 4048 755.5 1.3e-217 NP_001284366 (OMIM: 609090) F-box only protein 4 i ( 305) 174 43.1 0.0019 NP_277019 (OMIM: 609090) F-box only protein 4 isof ( 307) 174 43.1 0.0019 XP_011512328 (OMIM: 609090) PREDICTED: F-box only ( 341) 174 43.1 0.0021 NP_036308 (OMIM: 609090) F-box only protein 4 isof ( 387) 174 43.2 0.0023 NP_036289 (OMIM: 605652) F-box/LRR-repeat protein ( 423) 172 42.8 0.0032 XP_005265071 (OMIM: 605652) PREDICTED: F-box/LRR-r ( 454) 172 42.9 0.0033 XP_005257803 (OMIM: 609086) PREDICTED: F-box/LRR-r ( 473) 172 42.9 0.0034 NP_116264 (OMIM: 609086) F-box/LRR-repeat protein ( 436) 170 42.5 0.0042 NP_758954 (OMIM: 608519) F-box only protein 16 iso ( 292) 165 41.4 0.0058 >>NP_036293 (OMIM: 605655) F-box/LRR-repeat protein 5 is (691 aa) initn: 4691 init1: 4691 opt: 4691 Z-score: 4665.8 bits: 873.8 E(85289): 0 Smith-Waterman score: 4691; 99.7% identity (99.7% similar) in 691 aa overlap (1-691:1-691) 10 20 30 40 50 60 pF1KE3 MAPFPEEVDVFTAPHWRMKQLVGLYCDKLSKTNFSNNNDFRALLQSLYATFTEFKMHEQI ::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::: NP_036 MAPFPEEVDVFTAPHWRMKQLVGLYCDKLSKTNFSNNNDFRALLQSLYATFKEFKMHEQI 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 ENEYIIGLLQQRSQTIYNVHSDNKLSEMLSLFEKGLKNVKNEYEQLNYAKQLKERLEAFT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_036 ENEYIIGLLQQRSQTIYNVHSDNKLSEMLSLFEKGLKNVKNEYEQLNYAKQLKERLEAFT 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 RDFLPHMKEEEEVFQPMLMEYFTYEELKDIKKKVIAQHCSQKDTAELLRGLSLWNHAEER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_036 RDFLPHMKEEEEVFQPMLMEYFTYEELKDIKKKVIAQHCSQKDTAELLRGLSLWNHAEER 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 QKFFKYSVDEKSDKEAEVSEHSTGITHLPPEVMLSIFSYLNPQELCRCSQVSMKWSQLTK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_036 QKFFKYSVDEKSDKEAEVSEHSTGITHLPPEVMLSIFSYLNPQELCRCSQVSMKWSQLTK 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 TRSLWKHLYPVHWARGDWYSGPATELDTEPDDEWVKNRKDESRAFHEWDEDADIDESEES : :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_036 TGSLWKHLYPVHWARGDWYSGPATELDTEPDDEWVKNRKDESRAFHEWDEDADIDESEES 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 AEESIAISIAQMEKRLLHGLIHNVLPYVGTSVKTLVLAYSSAVSSKMVRQILELCPNLEH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_036 AEESIAISIAQMEKRLLHGLIHNVLPYVGTSVKTLVLAYSSAVSSKMVRQILELCPNLEH 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE3 LDLTQTDISDSAFDSWSWLGCCQSLRHLDLSGCEKITDVALEKISRALGILTSHQSGFLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_036 LDLTQTDISDSAFDSWSWLGCCQSLRHLDLSGCEKITDVALEKISRALGILTSHQSGFLK 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE3 TSTSKITSTAWKNKDITMQSTKQYACLHDLTNKGIGEEIDNEHPWTKPVSSENFTSPYVW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_036 TSTSKITSTAWKNKDITMQSTKQYACLHDLTNKGIGEEIDNEHPWTKPVSSENFTSPYVW 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE3 MLDAEDLADIEDTVEWRHRNVESLCVMETASNFSCSTSGCFSKDIVGLRTSVCWQQHCAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_036 MLDAEDLADIEDTVEWRHRNVESLCVMETASNFSCSTSGCFSKDIVGLRTSVCWQQHCAS 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE3 PAFAYCGHSFCCTGTALRTMSSLPESSAMCRKAARTRLPRGKDLIYFGSEKSDQETGRVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_036 PAFAYCGHSFCCTGTALRTMSSLPESSAMCRKAARTRLPRGKDLIYFGSEKSDQETGRVL 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE3 LFLSLSGCYQITDHGLRVLTLGGGLPYLEHLNLSGCLTITGAGLQDLVSACPSLNDEYFY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_036 LFLSLSGCYQITDHGLRVLTLGGGLPYLEHLNLSGCLTITGAGLQDLVSACPSLNDEYFY 610 620 630 640 650 660 670 680 690 pF1KE3 YCDNINGPHADTASGCQNLQCGFRACCRSGE ::::::::::::::::::::::::::::::: NP_036 YCDNINGPHADTASGCQNLQCGFRACCRSGE 670 680 690 >>NP_001180463 (OMIM: 605655) F-box/LRR-repeat protein 5 (690 aa) initn: 3411 init1: 3411 opt: 4673 Z-score: 4647.9 bits: 870.5 E(85289): 0 Smith-Waterman score: 4673; 99.6% identity (99.6% similar) in 691 aa overlap (1-691:1-690) 10 20 30 40 50 60 pF1KE3 MAPFPEEVDVFTAPHWRMKQLVGLYCDKLSKTNFSNNNDFRALLQSLYATFTEFKMHEQI ::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::: NP_001 MAPFPEEVDVFTAPHWRMKQLVGLYCDKLSKTNFSNNNDFRALLQSLYATFKEFKMHEQI 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 ENEYIIGLLQQRSQTIYNVHSDNKLSEMLSLFEKGLKNVKNEYEQLNYAKQLKERLEAFT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 ENEYIIGLLQQRSQTIYNVHSDNKLSEMLSLFEKGLKNVKNEYEQLNYAKQLKERLEAFT 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 RDFLPHMKEEEEVFQPMLMEYFTYEELKDIKKKVIAQHCSQKDTAELLRGLSLWNHAEER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 RDFLPHMKEEEEVFQPMLMEYFTYEELKDIKKKVIAQHCSQKDTAELLRGLSLWNHAEER 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 QKFFKYSVDEKSDKEAEVSEHSTGITHLPPEVMLSIFSYLNPQELCRCSQVSMKWSQLTK :::::::::::::: ::::::::::::::::::::::::::::::::::::::::::::: NP_001 QKFFKYSVDEKSDK-AEVSEHSTGITHLPPEVMLSIFSYLNPQELCRCSQVSMKWSQLTK 190 200 210 220 230 250 260 270 280 290 300 pF1KE3 TRSLWKHLYPVHWARGDWYSGPATELDTEPDDEWVKNRKDESRAFHEWDEDADIDESEES : :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 TGSLWKHLYPVHWARGDWYSGPATELDTEPDDEWVKNRKDESRAFHEWDEDADIDESEES 240 250 260 270 280 290 310 320 330 340 350 360 pF1KE3 AEESIAISIAQMEKRLLHGLIHNVLPYVGTSVKTLVLAYSSAVSSKMVRQILELCPNLEH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 AEESIAISIAQMEKRLLHGLIHNVLPYVGTSVKTLVLAYSSAVSSKMVRQILELCPNLEH 300 310 320 330 340 350 370 380 390 400 410 420 pF1KE3 LDLTQTDISDSAFDSWSWLGCCQSLRHLDLSGCEKITDVALEKISRALGILTSHQSGFLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LDLTQTDISDSAFDSWSWLGCCQSLRHLDLSGCEKITDVALEKISRALGILTSHQSGFLK 360 370 380 390 400 410 430 440 450 460 470 480 pF1KE3 TSTSKITSTAWKNKDITMQSTKQYACLHDLTNKGIGEEIDNEHPWTKPVSSENFTSPYVW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 TSTSKITSTAWKNKDITMQSTKQYACLHDLTNKGIGEEIDNEHPWTKPVSSENFTSPYVW 420 430 440 450 460 470 490 500 510 520 530 540 pF1KE3 MLDAEDLADIEDTVEWRHRNVESLCVMETASNFSCSTSGCFSKDIVGLRTSVCWQQHCAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MLDAEDLADIEDTVEWRHRNVESLCVMETASNFSCSTSGCFSKDIVGLRTSVCWQQHCAS 480 490 500 510 520 530 550 560 570 580 590 600 pF1KE3 PAFAYCGHSFCCTGTALRTMSSLPESSAMCRKAARTRLPRGKDLIYFGSEKSDQETGRVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 PAFAYCGHSFCCTGTALRTMSSLPESSAMCRKAARTRLPRGKDLIYFGSEKSDQETGRVL 540 550 560 570 580 590 610 620 630 640 650 660 pF1KE3 LFLSLSGCYQITDHGLRVLTLGGGLPYLEHLNLSGCLTITGAGLQDLVSACPSLNDEYFY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LFLSLSGCYQITDHGLRVLTLGGGLPYLEHLNLSGCLTITGAGLQDLVSACPSLNDEYFY 600 610 620 630 640 650 670 680 690 pF1KE3 YCDNINGPHADTASGCQNLQCGFRACCRSGE ::::::::::::::::::::::::::::::: NP_001 YCDNINGPHADTASGCQNLQCGFRACCRSGE 660 670 680 690 >>XP_006714022 (OMIM: 605655) PREDICTED: F-box/LRR-repea (672 aa) initn: 4483 init1: 4483 opt: 4483 Z-score: 4459.3 bits: 835.5 E(85289): 0 Smith-Waterman score: 4483; 99.7% identity (99.7% similar) in 663 aa overlap (29-691:10-672) 10 20 30 40 50 60 pF1KE3 MAPFPEEVDVFTAPHWRMKQLVGLYCDKLSKTNFSNNNDFRALLQSLYATFTEFKMHEQI ::::::::::::::::::::::: :::::::: XP_006 MGKRQTFSWLSKTNFSNNNDFRALLQSLYATFKEFKMHEQI 10 20 30 40 70 80 90 100 110 120 pF1KE3 ENEYIIGLLQQRSQTIYNVHSDNKLSEMLSLFEKGLKNVKNEYEQLNYAKQLKERLEAFT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 ENEYIIGLLQQRSQTIYNVHSDNKLSEMLSLFEKGLKNVKNEYEQLNYAKQLKERLEAFT 50 60 70 80 90 100 130 140 150 160 170 180 pF1KE3 RDFLPHMKEEEEVFQPMLMEYFTYEELKDIKKKVIAQHCSQKDTAELLRGLSLWNHAEER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 RDFLPHMKEEEEVFQPMLMEYFTYEELKDIKKKVIAQHCSQKDTAELLRGLSLWNHAEER 110 120 130 140 150 160 190 200 210 220 230 240 pF1KE3 QKFFKYSVDEKSDKEAEVSEHSTGITHLPPEVMLSIFSYLNPQELCRCSQVSMKWSQLTK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 QKFFKYSVDEKSDKEAEVSEHSTGITHLPPEVMLSIFSYLNPQELCRCSQVSMKWSQLTK 170 180 190 200 210 220 250 260 270 280 290 300 pF1KE3 TRSLWKHLYPVHWARGDWYSGPATELDTEPDDEWVKNRKDESRAFHEWDEDADIDESEES : :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 TGSLWKHLYPVHWARGDWYSGPATELDTEPDDEWVKNRKDESRAFHEWDEDADIDESEES 230 240 250 260 270 280 310 320 330 340 350 360 pF1KE3 AEESIAISIAQMEKRLLHGLIHNVLPYVGTSVKTLVLAYSSAVSSKMVRQILELCPNLEH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 AEESIAISIAQMEKRLLHGLIHNVLPYVGTSVKTLVLAYSSAVSSKMVRQILELCPNLEH 290 300 310 320 330 340 370 380 390 400 410 420 pF1KE3 LDLTQTDISDSAFDSWSWLGCCQSLRHLDLSGCEKITDVALEKISRALGILTSHQSGFLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 LDLTQTDISDSAFDSWSWLGCCQSLRHLDLSGCEKITDVALEKISRALGILTSHQSGFLK 350 360 370 380 390 400 430 440 450 460 470 480 pF1KE3 TSTSKITSTAWKNKDITMQSTKQYACLHDLTNKGIGEEIDNEHPWTKPVSSENFTSPYVW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 TSTSKITSTAWKNKDITMQSTKQYACLHDLTNKGIGEEIDNEHPWTKPVSSENFTSPYVW 410 420 430 440 450 460 490 500 510 520 530 540 pF1KE3 MLDAEDLADIEDTVEWRHRNVESLCVMETASNFSCSTSGCFSKDIVGLRTSVCWQQHCAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 MLDAEDLADIEDTVEWRHRNVESLCVMETASNFSCSTSGCFSKDIVGLRTSVCWQQHCAS 470 480 490 500 510 520 550 560 570 580 590 600 pF1KE3 PAFAYCGHSFCCTGTALRTMSSLPESSAMCRKAARTRLPRGKDLIYFGSEKSDQETGRVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 PAFAYCGHSFCCTGTALRTMSSLPESSAMCRKAARTRLPRGKDLIYFGSEKSDQETGRVL 530 540 550 560 570 580 610 620 630 640 650 660 pF1KE3 LFLSLSGCYQITDHGLRVLTLGGGLPYLEHLNLSGCLTITGAGLQDLVSACPSLNDEYFY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 LFLSLSGCYQITDHGLRVLTLGGGLPYLEHLNLSGCLTITGAGLQDLVSACPSLNDEYFY 590 600 610 620 630 640 670 680 690 pF1KE3 YCDNINGPHADTASGCQNLQCGFRACCRSGE ::::::::::::::::::::::::::::::: XP_006 YCDNINGPHADTASGCQNLQCGFRACCRSGE 650 660 670 >>NP_001180464 (OMIM: 605655) F-box/LRR-repeat protein 5 (674 aa) initn: 4378 init1: 4378 opt: 4378 Z-score: 4354.9 bits: 816.2 E(85289): 0 Smith-Waterman score: 4540; 97.3% identity (97.3% similar) in 691 aa overlap (1-691:1-674) 10 20 30 40 50 60 pF1KE3 MAPFPEEVDVFTAPHWRMKQLVGLYCDKLSKTNFSNNNDFRALLQSLYATFTEFKMHEQI :::::::::::::::::::::::::::: :::::: :::::::: NP_001 MAPFPEEVDVFTAPHWRMKQLVGLYCDK-----------------SLYATFKEFKMHEQI 10 20 30 40 70 80 90 100 110 120 pF1KE3 ENEYIIGLLQQRSQTIYNVHSDNKLSEMLSLFEKGLKNVKNEYEQLNYAKQLKERLEAFT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 ENEYIIGLLQQRSQTIYNVHSDNKLSEMLSLFEKGLKNVKNEYEQLNYAKQLKERLEAFT 50 60 70 80 90 100 130 140 150 160 170 180 pF1KE3 RDFLPHMKEEEEVFQPMLMEYFTYEELKDIKKKVIAQHCSQKDTAELLRGLSLWNHAEER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 RDFLPHMKEEEEVFQPMLMEYFTYEELKDIKKKVIAQHCSQKDTAELLRGLSLWNHAEER 110 120 130 140 150 160 190 200 210 220 230 240 pF1KE3 QKFFKYSVDEKSDKEAEVSEHSTGITHLPPEVMLSIFSYLNPQELCRCSQVSMKWSQLTK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 QKFFKYSVDEKSDKEAEVSEHSTGITHLPPEVMLSIFSYLNPQELCRCSQVSMKWSQLTK 170 180 190 200 210 220 250 260 270 280 290 300 pF1KE3 TRSLWKHLYPVHWARGDWYSGPATELDTEPDDEWVKNRKDESRAFHEWDEDADIDESEES : :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 TGSLWKHLYPVHWARGDWYSGPATELDTEPDDEWVKNRKDESRAFHEWDEDADIDESEES 230 240 250 260 270 280 310 320 330 340 350 360 pF1KE3 AEESIAISIAQMEKRLLHGLIHNVLPYVGTSVKTLVLAYSSAVSSKMVRQILELCPNLEH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 AEESIAISIAQMEKRLLHGLIHNVLPYVGTSVKTLVLAYSSAVSSKMVRQILELCPNLEH 290 300 310 320 330 340 370 380 390 400 410 420 pF1KE3 LDLTQTDISDSAFDSWSWLGCCQSLRHLDLSGCEKITDVALEKISRALGILTSHQSGFLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LDLTQTDISDSAFDSWSWLGCCQSLRHLDLSGCEKITDVALEKISRALGILTSHQSGFLK 350 360 370 380 390 400 430 440 450 460 470 480 pF1KE3 TSTSKITSTAWKNKDITMQSTKQYACLHDLTNKGIGEEIDNEHPWTKPVSSENFTSPYVW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 TSTSKITSTAWKNKDITMQSTKQYACLHDLTNKGIGEEIDNEHPWTKPVSSENFTSPYVW 410 420 430 440 450 460 490 500 510 520 530 540 pF1KE3 MLDAEDLADIEDTVEWRHRNVESLCVMETASNFSCSTSGCFSKDIVGLRTSVCWQQHCAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MLDAEDLADIEDTVEWRHRNVESLCVMETASNFSCSTSGCFSKDIVGLRTSVCWQQHCAS 470 480 490 500 510 520 550 560 570 580 590 600 pF1KE3 PAFAYCGHSFCCTGTALRTMSSLPESSAMCRKAARTRLPRGKDLIYFGSEKSDQETGRVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 PAFAYCGHSFCCTGTALRTMSSLPESSAMCRKAARTRLPRGKDLIYFGSEKSDQETGRVL 530 540 550 560 570 580 610 620 630 640 650 660 pF1KE3 LFLSLSGCYQITDHGLRVLTLGGGLPYLEHLNLSGCLTITGAGLQDLVSACPSLNDEYFY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LFLSLSGCYQITDHGLRVLTLGGGLPYLEHLNLSGCLTITGAGLQDLVSACPSLNDEYFY 590 600 610 620 630 640 670 680 690 pF1KE3 YCDNINGPHADTASGCQNLQCGFRACCRSGE ::::::::::::::::::::::::::::::: NP_001 YCDNINGPHADTASGCQNLQCGFRACCRSGE 650 660 670 >>XP_011512133 (OMIM: 605655) PREDICTED: F-box/LRR-repea (655 aa) initn: 4376 init1: 4376 opt: 4376 Z-score: 4353.1 bits: 815.8 E(85289): 0 Smith-Waterman score: 4376; 99.7% identity (99.7% similar) in 646 aa overlap (46-691:10-655) 20 30 40 50 60 70 pF1KE3 WRMKQLVGLYCDKLSKTNFSNNNDFRALLQSLYATFTEFKMHEQIENEYIIGLLQQRSQT :::::: ::::::::::::::::::::::: XP_011 MGKRQTFSWSLYATFKEFKMHEQIENEYIIGLLQQRSQT 10 20 30 80 90 100 110 120 130 pF1KE3 IYNVHSDNKLSEMLSLFEKGLKNVKNEYEQLNYAKQLKERLEAFTRDFLPHMKEEEEVFQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 IYNVHSDNKLSEMLSLFEKGLKNVKNEYEQLNYAKQLKERLEAFTRDFLPHMKEEEEVFQ 40 50 60 70 80 90 140 150 160 170 180 190 pF1KE3 PMLMEYFTYEELKDIKKKVIAQHCSQKDTAELLRGLSLWNHAEERQKFFKYSVDEKSDKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 PMLMEYFTYEELKDIKKKVIAQHCSQKDTAELLRGLSLWNHAEERQKFFKYSVDEKSDKE 100 110 120 130 140 150 200 210 220 230 240 250 pF1KE3 AEVSEHSTGITHLPPEVMLSIFSYLNPQELCRCSQVSMKWSQLTKTRSLWKHLYPVHWAR :::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::: XP_011 AEVSEHSTGITHLPPEVMLSIFSYLNPQELCRCSQVSMKWSQLTKTGSLWKHLYPVHWAR 160 170 180 190 200 210 260 270 280 290 300 310 pF1KE3 GDWYSGPATELDTEPDDEWVKNRKDESRAFHEWDEDADIDESEESAEESIAISIAQMEKR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 GDWYSGPATELDTEPDDEWVKNRKDESRAFHEWDEDADIDESEESAEESIAISIAQMEKR 220 230 240 250 260 270 320 330 340 350 360 370 pF1KE3 LLHGLIHNVLPYVGTSVKTLVLAYSSAVSSKMVRQILELCPNLEHLDLTQTDISDSAFDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 LLHGLIHNVLPYVGTSVKTLVLAYSSAVSSKMVRQILELCPNLEHLDLTQTDISDSAFDS 280 290 300 310 320 330 380 390 400 410 420 430 pF1KE3 WSWLGCCQSLRHLDLSGCEKITDVALEKISRALGILTSHQSGFLKTSTSKITSTAWKNKD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 WSWLGCCQSLRHLDLSGCEKITDVALEKISRALGILTSHQSGFLKTSTSKITSTAWKNKD 340 350 360 370 380 390 440 450 460 470 480 490 pF1KE3 ITMQSTKQYACLHDLTNKGIGEEIDNEHPWTKPVSSENFTSPYVWMLDAEDLADIEDTVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 ITMQSTKQYACLHDLTNKGIGEEIDNEHPWTKPVSSENFTSPYVWMLDAEDLADIEDTVE 400 410 420 430 440 450 500 510 520 530 540 550 pF1KE3 WRHRNVESLCVMETASNFSCSTSGCFSKDIVGLRTSVCWQQHCASPAFAYCGHSFCCTGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 WRHRNVESLCVMETASNFSCSTSGCFSKDIVGLRTSVCWQQHCASPAFAYCGHSFCCTGT 460 470 480 490 500 510 560 570 580 590 600 610 pF1KE3 ALRTMSSLPESSAMCRKAARTRLPRGKDLIYFGSEKSDQETGRVLLFLSLSGCYQITDHG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 ALRTMSSLPESSAMCRKAARTRLPRGKDLIYFGSEKSDQETGRVLLFLSLSGCYQITDHG 520 530 540 550 560 570 620 630 640 650 660 670 pF1KE3 LRVLTLGGGLPYLEHLNLSGCLTITGAGLQDLVSACPSLNDEYFYYCDNINGPHADTASG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 LRVLTLGGGLPYLEHLNLSGCLTITGAGLQDLVSACPSLNDEYFYYCDNINGPHADTASG 580 590 600 610 620 630 680 690 pF1KE3 CQNLQCGFRACCRSGE :::::::::::::::: XP_011 CQNLQCGFRACCRSGE 640 650 >>XP_016863508 (OMIM: 605655) PREDICTED: F-box/LRR-repea (636 aa) initn: 4321 init1: 4321 opt: 4321 Z-score: 4298.6 bits: 805.7 E(85289): 0 Smith-Waterman score: 4321; 99.8% identity (99.8% similar) in 636 aa overlap (56-691:1-636) 30 40 50 60 70 80 pF1KE3 CDKLSKTNFSNNNDFRALLQSLYATFTEFKMHEQIENEYIIGLLQQRSQTIYNVHSDNKL :::::::::::::::::::::::::::::: XP_016 MHEQIENEYIIGLLQQRSQTIYNVHSDNKL 10 20 30 90 100 110 120 130 140 pF1KE3 SEMLSLFEKGLKNVKNEYEQLNYAKQLKERLEAFTRDFLPHMKEEEEVFQPMLMEYFTYE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 SEMLSLFEKGLKNVKNEYEQLNYAKQLKERLEAFTRDFLPHMKEEEEVFQPMLMEYFTYE 40 50 60 70 80 90 150 160 170 180 190 200 pF1KE3 ELKDIKKKVIAQHCSQKDTAELLRGLSLWNHAEERQKFFKYSVDEKSDKEAEVSEHSTGI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 ELKDIKKKVIAQHCSQKDTAELLRGLSLWNHAEERQKFFKYSVDEKSDKEAEVSEHSTGI 100 110 120 130 140 150 210 220 230 240 250 260 pF1KE3 THLPPEVMLSIFSYLNPQELCRCSQVSMKWSQLTKTRSLWKHLYPVHWARGDWYSGPATE :::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::: XP_016 THLPPEVMLSIFSYLNPQELCRCSQVSMKWSQLTKTGSLWKHLYPVHWARGDWYSGPATE 160 170 180 190 200 210 270 280 290 300 310 320 pF1KE3 LDTEPDDEWVKNRKDESRAFHEWDEDADIDESEESAEESIAISIAQMEKRLLHGLIHNVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 LDTEPDDEWVKNRKDESRAFHEWDEDADIDESEESAEESIAISIAQMEKRLLHGLIHNVL 220 230 240 250 260 270 330 340 350 360 370 380 pF1KE3 PYVGTSVKTLVLAYSSAVSSKMVRQILELCPNLEHLDLTQTDISDSAFDSWSWLGCCQSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 PYVGTSVKTLVLAYSSAVSSKMVRQILELCPNLEHLDLTQTDISDSAFDSWSWLGCCQSL 280 290 300 310 320 330 390 400 410 420 430 440 pF1KE3 RHLDLSGCEKITDVALEKISRALGILTSHQSGFLKTSTSKITSTAWKNKDITMQSTKQYA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 RHLDLSGCEKITDVALEKISRALGILTSHQSGFLKTSTSKITSTAWKNKDITMQSTKQYA 340 350 360 370 380 390 450 460 470 480 490 500 pF1KE3 CLHDLTNKGIGEEIDNEHPWTKPVSSENFTSPYVWMLDAEDLADIEDTVEWRHRNVESLC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 CLHDLTNKGIGEEIDNEHPWTKPVSSENFTSPYVWMLDAEDLADIEDTVEWRHRNVESLC 400 410 420 430 440 450 510 520 530 540 550 560 pF1KE3 VMETASNFSCSTSGCFSKDIVGLRTSVCWQQHCASPAFAYCGHSFCCTGTALRTMSSLPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 VMETASNFSCSTSGCFSKDIVGLRTSVCWQQHCASPAFAYCGHSFCCTGTALRTMSSLPE 460 470 480 490 500 510 570 580 590 600 610 620 pF1KE3 SSAMCRKAARTRLPRGKDLIYFGSEKSDQETGRVLLFLSLSGCYQITDHGLRVLTLGGGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 SSAMCRKAARTRLPRGKDLIYFGSEKSDQETGRVLLFLSLSGCYQITDHGLRVLTLGGGL 520 530 540 550 560 570 630 640 650 660 670 680 pF1KE3 PYLEHLNLSGCLTITGAGLQDLVSACPSLNDEYFYYCDNINGPHADTASGCQNLQCGFRA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 PYLEHLNLSGCLTITGAGLQDLVSACPSLNDEYFYYCDNINGPHADTASGCQNLQCGFRA 580 590 600 610 620 630 690 pF1KE3 CCRSGE :::::: XP_016 CCRSGE >>XP_011512134 (OMIM: 605655) PREDICTED: F-box/LRR-repea (636 aa) initn: 4321 init1: 4321 opt: 4321 Z-score: 4298.6 bits: 805.7 E(85289): 0 Smith-Waterman score: 4321; 99.8% identity (99.8% similar) in 636 aa overlap (56-691:1-636) 30 40 50 60 70 80 pF1KE3 CDKLSKTNFSNNNDFRALLQSLYATFTEFKMHEQIENEYIIGLLQQRSQTIYNVHSDNKL :::::::::::::::::::::::::::::: XP_011 MHEQIENEYIIGLLQQRSQTIYNVHSDNKL 10 20 30 90 100 110 120 130 140 pF1KE3 SEMLSLFEKGLKNVKNEYEQLNYAKQLKERLEAFTRDFLPHMKEEEEVFQPMLMEYFTYE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 SEMLSLFEKGLKNVKNEYEQLNYAKQLKERLEAFTRDFLPHMKEEEEVFQPMLMEYFTYE 40 50 60 70 80 90 150 160 170 180 190 200 pF1KE3 ELKDIKKKVIAQHCSQKDTAELLRGLSLWNHAEERQKFFKYSVDEKSDKEAEVSEHSTGI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 ELKDIKKKVIAQHCSQKDTAELLRGLSLWNHAEERQKFFKYSVDEKSDKEAEVSEHSTGI 100 110 120 130 140 150 210 220 230 240 250 260 pF1KE3 THLPPEVMLSIFSYLNPQELCRCSQVSMKWSQLTKTRSLWKHLYPVHWARGDWYSGPATE :::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::: XP_011 THLPPEVMLSIFSYLNPQELCRCSQVSMKWSQLTKTGSLWKHLYPVHWARGDWYSGPATE 160 170 180 190 200 210 270 280 290 300 310 320 pF1KE3 LDTEPDDEWVKNRKDESRAFHEWDEDADIDESEESAEESIAISIAQMEKRLLHGLIHNVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 LDTEPDDEWVKNRKDESRAFHEWDEDADIDESEESAEESIAISIAQMEKRLLHGLIHNVL 220 230 240 250 260 270 330 340 350 360 370 380 pF1KE3 PYVGTSVKTLVLAYSSAVSSKMVRQILELCPNLEHLDLTQTDISDSAFDSWSWLGCCQSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 PYVGTSVKTLVLAYSSAVSSKMVRQILELCPNLEHLDLTQTDISDSAFDSWSWLGCCQSL 280 290 300 310 320 330 390 400 410 420 430 440 pF1KE3 RHLDLSGCEKITDVALEKISRALGILTSHQSGFLKTSTSKITSTAWKNKDITMQSTKQYA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 RHLDLSGCEKITDVALEKISRALGILTSHQSGFLKTSTSKITSTAWKNKDITMQSTKQYA 340 350 360 370 380 390 450 460 470 480 490 500 pF1KE3 CLHDLTNKGIGEEIDNEHPWTKPVSSENFTSPYVWMLDAEDLADIEDTVEWRHRNVESLC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 CLHDLTNKGIGEEIDNEHPWTKPVSSENFTSPYVWMLDAEDLADIEDTVEWRHRNVESLC 400 410 420 430 440 450 510 520 530 540 550 560 pF1KE3 VMETASNFSCSTSGCFSKDIVGLRTSVCWQQHCASPAFAYCGHSFCCTGTALRTMSSLPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 VMETASNFSCSTSGCFSKDIVGLRTSVCWQQHCASPAFAYCGHSFCCTGTALRTMSSLPE 460 470 480 490 500 510 570 580 590 600 610 620 pF1KE3 SSAMCRKAARTRLPRGKDLIYFGSEKSDQETGRVLLFLSLSGCYQITDHGLRVLTLGGGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 SSAMCRKAARTRLPRGKDLIYFGSEKSDQETGRVLLFLSLSGCYQITDHGLRVLTLGGGL 520 530 540 550 560 570 630 640 650 660 670 680 pF1KE3 PYLEHLNLSGCLTITGAGLQDLVSACPSLNDEYFYYCDNINGPHADTASGCQNLQCGFRA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 PYLEHLNLSGCLTITGAGLQDLVSACPSLNDEYFYYCDNINGPHADTASGCQNLQCGFRA 580 590 600 610 620 630 690 pF1KE3 CCRSGE :::::: XP_011 CCRSGE >>XP_011512135 (OMIM: 605655) PREDICTED: F-box/LRR-repea (619 aa) initn: 4048 init1: 4048 opt: 4048 Z-score: 4027.6 bits: 755.5 E(85289): 1.3e-217 Smith-Waterman score: 4091; 89.4% identity (89.4% similar) in 691 aa overlap (1-691:1-619) 10 20 30 40 50 60 pF1KE3 MAPFPEEVDVFTAPHWRMKQLVGLYCDKLSKTNFSNNNDFRALLQSLYATFTEFKMHEQI :::::::::::::::::::::::::::: XP_011 MAPFPEEVDVFTAPHWRMKQLVGLYCDK-------------------------------- 10 20 70 80 90 100 110 120 pF1KE3 ENEYIIGLLQQRSQTIYNVHSDNKLSEMLSLFEKGLKNVKNEYEQLNYAKQLKERLEAFT :::::::::::::::::::: XP_011 ----------------------------------------NEYEQLNYAKQLKERLEAFT 30 40 130 140 150 160 170 180 pF1KE3 RDFLPHMKEEEEVFQPMLMEYFTYEELKDIKKKVIAQHCSQKDTAELLRGLSLWNHAEER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 RDFLPHMKEEEEVFQPMLMEYFTYEELKDIKKKVIAQHCSQKDTAELLRGLSLWNHAEER 50 60 70 80 90 100 190 200 210 220 230 240 pF1KE3 QKFFKYSVDEKSDKEAEVSEHSTGITHLPPEVMLSIFSYLNPQELCRCSQVSMKWSQLTK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 QKFFKYSVDEKSDKEAEVSEHSTGITHLPPEVMLSIFSYLNPQELCRCSQVSMKWSQLTK 110 120 130 140 150 160 250 260 270 280 290 300 pF1KE3 TRSLWKHLYPVHWARGDWYSGPATELDTEPDDEWVKNRKDESRAFHEWDEDADIDESEES : :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 TGSLWKHLYPVHWARGDWYSGPATELDTEPDDEWVKNRKDESRAFHEWDEDADIDESEES 170 180 190 200 210 220 310 320 330 340 350 360 pF1KE3 AEESIAISIAQMEKRLLHGLIHNVLPYVGTSVKTLVLAYSSAVSSKMVRQILELCPNLEH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 AEESIAISIAQMEKRLLHGLIHNVLPYVGTSVKTLVLAYSSAVSSKMVRQILELCPNLEH 230 240 250 260 270 280 370 380 390 400 410 420 pF1KE3 LDLTQTDISDSAFDSWSWLGCCQSLRHLDLSGCEKITDVALEKISRALGILTSHQSGFLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 LDLTQTDISDSAFDSWSWLGCCQSLRHLDLSGCEKITDVALEKISRALGILTSHQSGFLK 290 300 310 320 330 340 430 440 450 460 470 480 pF1KE3 TSTSKITSTAWKNKDITMQSTKQYACLHDLTNKGIGEEIDNEHPWTKPVSSENFTSPYVW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 TSTSKITSTAWKNKDITMQSTKQYACLHDLTNKGIGEEIDNEHPWTKPVSSENFTSPYVW 350 360 370 380 390 400 490 500 510 520 530 540 pF1KE3 MLDAEDLADIEDTVEWRHRNVESLCVMETASNFSCSTSGCFSKDIVGLRTSVCWQQHCAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 MLDAEDLADIEDTVEWRHRNVESLCVMETASNFSCSTSGCFSKDIVGLRTSVCWQQHCAS 410 420 430 440 450 460 550 560 570 580 590 600 pF1KE3 PAFAYCGHSFCCTGTALRTMSSLPESSAMCRKAARTRLPRGKDLIYFGSEKSDQETGRVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 PAFAYCGHSFCCTGTALRTMSSLPESSAMCRKAARTRLPRGKDLIYFGSEKSDQETGRVL 470 480 490 500 510 520 610 620 630 640 650 660 pF1KE3 LFLSLSGCYQITDHGLRVLTLGGGLPYLEHLNLSGCLTITGAGLQDLVSACPSLNDEYFY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 LFLSLSGCYQITDHGLRVLTLGGGLPYLEHLNLSGCLTITGAGLQDLVSACPSLNDEYFY 530 540 550 560 570 580 670 680 690 pF1KE3 YCDNINGPHADTASGCQNLQCGFRACCRSGE ::::::::::::::::::::::::::::::: XP_011 YCDNINGPHADTASGCQNLQCGFRACCRSGE 590 600 610 >>NP_001284366 (OMIM: 609090) F-box only protein 4 isofo (305 aa) initn: 159 init1: 133 opt: 174 Z-score: 182.9 bits: 43.1 E(85289): 0.0019 Smith-Waterman score: 174; 30.9% identity (64.9% similar) in 97 aa overlap (181-273:36-130) 160 170 180 190 200 210 pF1KE3 KKKVIAQHCSQKDTAELLRGLSLWNHAEERQKFFKYSVDEKSDKEAEVSEHSTGITHLPP :. : : . ...: ::.: .. .:.:: NP_001 PRSGTNSPPPPFSDWGRLEAAILSGWKTFWQSVSKERVARTTSRE-EVDEAASTLTRLPI 10 20 30 40 50 60 220 230 240 250 260 pF1KE3 EVMLSIFSYLNPQELCRCSQVSMKWSQLTKTRSLWKHLY----PVHWARGDWYSGPATEL .:.: :.:.:.:..::. .... :.. .. ::... : :. :: : : :. NP_001 DVQLYILSFLSPHDLCQLGSTNHYWNETVRDPILWRYFLLRDLP-SWSSVDWKSLPDLEI 70 80 90 100 110 120 270 280 290 300 310 320 pF1KE3 DTEPDDEWVKNRKDESRAFHEWDEDADIDESEESAEESIAISIAQMEKRLLHGLIHNVLP .: .: NP_001 LKKPISEVTDGAFFDYMAVYRMCCPYTRRASKSSRPMYGAVTSFLHSLIIQNEPRFAMFG 130 140 150 160 170 180 >>NP_277019 (OMIM: 609090) F-box only protein 4 isoform (307 aa) initn: 159 init1: 133 opt: 174 Z-score: 182.8 bits: 43.1 E(85289): 0.0019 Smith-Waterman score: 174; 30.9% identity (64.9% similar) in 97 aa overlap (181-273:36-130) 160 170 180 190 200 210 pF1KE3 KKKVIAQHCSQKDTAELLRGLSLWNHAEERQKFFKYSVDEKSDKEAEVSEHSTGITHLPP :. : : . ...: ::.: .. .:.:: NP_277 PRSGTNSPPPPFSDWGRLEAAILSGWKTFWQSVSKERVARTTSRE-EVDEAASTLTRLPI 10 20 30 40 50 60 220 230 240 250 260 pF1KE3 EVMLSIFSYLNPQELCRCSQVSMKWSQLTKTRSLWKHLY----PVHWARGDWYSGPATEL .:.: :.:.:.:..::. .... :.. .. ::... : :. :: : : :. NP_277 DVQLYILSFLSPHDLCQLGSTNHYWNETVRDPILWRYFLLRDLP-SWSSVDWKSLPDLEI 70 80 90 100 110 120 270 280 290 300 310 320 pF1KE3 DTEPDDEWVKNRKDESRAFHEWDEDADIDESEESAEESIAISIAQMEKRLLHGLIHNVLP .: .: NP_277 LKKPISEVTDGAFFDYMAVYRMCCPYTRRASKSSRPMYGAVTSFLHSLIIQNEPRFAMFG 130 140 150 160 170 180 691 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 22:28:49 2016 done: Sun Nov 6 22:28:50 2016 Total Scan time: 11.060 Total Display time: 0.150 Function used was FASTA [36.3.4 Apr, 2011]