FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3674, 399 aa 1>>>pF1KE3674 399 - 399 aa - 399 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.7625+/-0.000406; mu= 20.0757+/- 0.025 mean_var=62.1432+/-13.044, 0's: 0 Z-trim(111.6): 13 B-trim: 931 in 1/52 Lambda= 0.162696 statistics sampled from 20274 (20280) to 20274 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.611), E-opt: 0.2 (0.238), width: 16 Scan time: 6.220 The best scores are: opt bits E(85289) NP_001130046 (OMIM: 604155) lanC-like protein 1 [H ( 399) 2767 658.3 9.5e-189 NP_001130047 (OMIM: 604155) lanC-like protein 1 [H ( 399) 2767 658.3 9.5e-189 NP_006046 (OMIM: 604155) lanC-like protein 1 [Homo ( 399) 2767 658.3 9.5e-189 XP_005246300 (OMIM: 604155) PREDICTED: lanC-like p ( 411) 2767 658.3 9.8e-189 NP_061167 (OMIM: 612919) lanC-like protein 2 [Homo ( 450) 1590 382.0 1.5e-105 >>NP_001130046 (OMIM: 604155) lanC-like protein 1 [Homo (399 aa) initn: 2767 init1: 2767 opt: 2767 Z-score: 3509.6 bits: 658.3 E(85289): 9.5e-189 Smith-Waterman score: 2767; 100.0% identity (100.0% similar) in 399 aa overlap (1-399:1-399) 10 20 30 40 50 60 pF1KE3 MAQRAFPNPYADYNKSLAEGYFDAAGRLTPEFSQRLTNKIRELLQQMERGLKSADPRDGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MAQRAFPNPYADYNKSLAEGYFDAAGRLTPEFSQRLTNKIRELLQQMERGLKSADPRDGT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 GYTGWAGIAVLYLHLYDVFGDPAYLQLAHGYVKQSLNCLTKRSITFLCGDAGPLAVAAVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 GYTGWAGIAVLYLHLYDVFGDPAYLQLAHGYVKQSLNCLTKRSITFLCGDAGPLAVAAVL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 YHKMNNEKQAEDCITRLIHLNKIDPHAPNEMLYGRIGYIYALLFVNKNFGVEKIPQSHIQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 YHKMNNEKQAEDCITRLIHLNKIDPHAPNEMLYGRIGYIYALLFVNKNFGVEKIPQSHIQ 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 QICETILTSGENLARKRNFTAKSPLMYEWYQEYYVGAAHGLAGIYYYLMQPSLQVSQGKL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 QICETILTSGENLARKRNFTAKSPLMYEWYQEYYVGAAHGLAGIYYYLMQPSLQVSQGKL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 HSLVKPSVDYVCQLKFPSGNYPPCIGDNRDLLVHWCHGAPGVIYMLIQAYKVFREEKYLC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 HSLVKPSVDYVCQLKFPSGNYPPCIGDNRDLLVHWCHGAPGVIYMLIQAYKVFREEKYLC 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 DAYQCADVIWQYGLLKKGYGLCHGSAGNAYAFLTLYNLTQDMKYLYRACKFAEWCLEYGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 DAYQCADVIWQYGLLKKGYGLCHGSAGNAYAFLTLYNLTQDMKYLYRACKFAEWCLEYGE 310 320 330 340 350 360 370 380 390 pF1KE3 HGCRTPDTPFSLFEGMAGTIYFLADLLVPTKARFPAFEL ::::::::::::::::::::::::::::::::::::::: NP_001 HGCRTPDTPFSLFEGMAGTIYFLADLLVPTKARFPAFEL 370 380 390 >>NP_001130047 (OMIM: 604155) lanC-like protein 1 [Homo (399 aa) initn: 2767 init1: 2767 opt: 2767 Z-score: 3509.6 bits: 658.3 E(85289): 9.5e-189 Smith-Waterman score: 2767; 100.0% identity (100.0% similar) in 399 aa overlap (1-399:1-399) 10 20 30 40 50 60 pF1KE3 MAQRAFPNPYADYNKSLAEGYFDAAGRLTPEFSQRLTNKIRELLQQMERGLKSADPRDGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MAQRAFPNPYADYNKSLAEGYFDAAGRLTPEFSQRLTNKIRELLQQMERGLKSADPRDGT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 GYTGWAGIAVLYLHLYDVFGDPAYLQLAHGYVKQSLNCLTKRSITFLCGDAGPLAVAAVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 GYTGWAGIAVLYLHLYDVFGDPAYLQLAHGYVKQSLNCLTKRSITFLCGDAGPLAVAAVL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 YHKMNNEKQAEDCITRLIHLNKIDPHAPNEMLYGRIGYIYALLFVNKNFGVEKIPQSHIQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 YHKMNNEKQAEDCITRLIHLNKIDPHAPNEMLYGRIGYIYALLFVNKNFGVEKIPQSHIQ 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 QICETILTSGENLARKRNFTAKSPLMYEWYQEYYVGAAHGLAGIYYYLMQPSLQVSQGKL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 QICETILTSGENLARKRNFTAKSPLMYEWYQEYYVGAAHGLAGIYYYLMQPSLQVSQGKL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 HSLVKPSVDYVCQLKFPSGNYPPCIGDNRDLLVHWCHGAPGVIYMLIQAYKVFREEKYLC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 HSLVKPSVDYVCQLKFPSGNYPPCIGDNRDLLVHWCHGAPGVIYMLIQAYKVFREEKYLC 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 DAYQCADVIWQYGLLKKGYGLCHGSAGNAYAFLTLYNLTQDMKYLYRACKFAEWCLEYGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 DAYQCADVIWQYGLLKKGYGLCHGSAGNAYAFLTLYNLTQDMKYLYRACKFAEWCLEYGE 310 320 330 340 350 360 370 380 390 pF1KE3 HGCRTPDTPFSLFEGMAGTIYFLADLLVPTKARFPAFEL ::::::::::::::::::::::::::::::::::::::: NP_001 HGCRTPDTPFSLFEGMAGTIYFLADLLVPTKARFPAFEL 370 380 390 >>NP_006046 (OMIM: 604155) lanC-like protein 1 [Homo sap (399 aa) initn: 2767 init1: 2767 opt: 2767 Z-score: 3509.6 bits: 658.3 E(85289): 9.5e-189 Smith-Waterman score: 2767; 100.0% identity (100.0% similar) in 399 aa overlap (1-399:1-399) 10 20 30 40 50 60 pF1KE3 MAQRAFPNPYADYNKSLAEGYFDAAGRLTPEFSQRLTNKIRELLQQMERGLKSADPRDGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 MAQRAFPNPYADYNKSLAEGYFDAAGRLTPEFSQRLTNKIRELLQQMERGLKSADPRDGT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 GYTGWAGIAVLYLHLYDVFGDPAYLQLAHGYVKQSLNCLTKRSITFLCGDAGPLAVAAVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 GYTGWAGIAVLYLHLYDVFGDPAYLQLAHGYVKQSLNCLTKRSITFLCGDAGPLAVAAVL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 YHKMNNEKQAEDCITRLIHLNKIDPHAPNEMLYGRIGYIYALLFVNKNFGVEKIPQSHIQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 YHKMNNEKQAEDCITRLIHLNKIDPHAPNEMLYGRIGYIYALLFVNKNFGVEKIPQSHIQ 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 QICETILTSGENLARKRNFTAKSPLMYEWYQEYYVGAAHGLAGIYYYLMQPSLQVSQGKL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 QICETILTSGENLARKRNFTAKSPLMYEWYQEYYVGAAHGLAGIYYYLMQPSLQVSQGKL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 HSLVKPSVDYVCQLKFPSGNYPPCIGDNRDLLVHWCHGAPGVIYMLIQAYKVFREEKYLC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 HSLVKPSVDYVCQLKFPSGNYPPCIGDNRDLLVHWCHGAPGVIYMLIQAYKVFREEKYLC 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 DAYQCADVIWQYGLLKKGYGLCHGSAGNAYAFLTLYNLTQDMKYLYRACKFAEWCLEYGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 DAYQCADVIWQYGLLKKGYGLCHGSAGNAYAFLTLYNLTQDMKYLYRACKFAEWCLEYGE 310 320 330 340 350 360 370 380 390 pF1KE3 HGCRTPDTPFSLFEGMAGTIYFLADLLVPTKARFPAFEL ::::::::::::::::::::::::::::::::::::::: NP_006 HGCRTPDTPFSLFEGMAGTIYFLADLLVPTKARFPAFEL 370 380 390 >>XP_005246300 (OMIM: 604155) PREDICTED: lanC-like prote (411 aa) initn: 2767 init1: 2767 opt: 2767 Z-score: 3509.4 bits: 658.3 E(85289): 9.8e-189 Smith-Waterman score: 2767; 100.0% identity (100.0% similar) in 399 aa overlap (1-399:13-411) 10 20 30 40 pF1KE3 MAQRAFPNPYADYNKSLAEGYFDAAGRLTPEFSQRLTNKIRELLQQME :::::::::::::::::::::::::::::::::::::::::::::::: XP_005 MGLICTRLASGVMAQRAFPNPYADYNKSLAEGYFDAAGRLTPEFSQRLTNKIRELLQQME 10 20 30 40 50 60 50 60 70 80 90 100 pF1KE3 RGLKSADPRDGTGYTGWAGIAVLYLHLYDVFGDPAYLQLAHGYVKQSLNCLTKRSITFLC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 RGLKSADPRDGTGYTGWAGIAVLYLHLYDVFGDPAYLQLAHGYVKQSLNCLTKRSITFLC 70 80 90 100 110 120 110 120 130 140 150 160 pF1KE3 GDAGPLAVAAVLYHKMNNEKQAEDCITRLIHLNKIDPHAPNEMLYGRIGYIYALLFVNKN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 GDAGPLAVAAVLYHKMNNEKQAEDCITRLIHLNKIDPHAPNEMLYGRIGYIYALLFVNKN 130 140 150 160 170 180 170 180 190 200 210 220 pF1KE3 FGVEKIPQSHIQQICETILTSGENLARKRNFTAKSPLMYEWYQEYYVGAAHGLAGIYYYL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 FGVEKIPQSHIQQICETILTSGENLARKRNFTAKSPLMYEWYQEYYVGAAHGLAGIYYYL 190 200 210 220 230 240 230 240 250 260 270 280 pF1KE3 MQPSLQVSQGKLHSLVKPSVDYVCQLKFPSGNYPPCIGDNRDLLVHWCHGAPGVIYMLIQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 MQPSLQVSQGKLHSLVKPSVDYVCQLKFPSGNYPPCIGDNRDLLVHWCHGAPGVIYMLIQ 250 260 270 280 290 300 290 300 310 320 330 340 pF1KE3 AYKVFREEKYLCDAYQCADVIWQYGLLKKGYGLCHGSAGNAYAFLTLYNLTQDMKYLYRA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 AYKVFREEKYLCDAYQCADVIWQYGLLKKGYGLCHGSAGNAYAFLTLYNLTQDMKYLYRA 310 320 330 340 350 360 350 360 370 380 390 pF1KE3 CKFAEWCLEYGEHGCRTPDTPFSLFEGMAGTIYFLADLLVPTKARFPAFEL ::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 CKFAEWCLEYGEHGCRTPDTPFSLFEGMAGTIYFLADLLVPTKARFPAFEL 370 380 390 400 410 >>NP_061167 (OMIM: 612919) lanC-like protein 2 [Homo sap (450 aa) initn: 1618 init1: 1176 opt: 1590 Z-score: 2015.8 bits: 382.0 E(85289): 1.5e-105 Smith-Waterman score: 1600; 54.2% identity (77.7% similar) in 426 aa overlap (1-399:19-444) 10 20 pF1KE3 MAQRAFPNPYADYNKS----LAEGY----------------- : .::: ::. ::. . :: : NP_061 MGETMSKRLKLHLGGEAEMEERAFVNPFPDYEAAAGALLASGAAEETGCVRPPATTDEPG 10 20 30 40 50 60 30 40 50 60 70 pF1KE3 --FDAAGRLTPEFSQRLTNKIRELLQQMERGLKSADPRDGTGYTGWAGIAVLYLHLYDVF : :.. .: .:. .::..::::::.:::.:::.: ..::::.:::.:::.:: : NP_061 LPFHQDGKIIHNFIRRIQTKIKDLLQQMEEGLKTADPHDCSAYTGWTGIALLYLQLYRVT 70 80 90 100 110 120 80 90 100 110 120 130 pF1KE3 GDPAYLQLAHGYVKQSLNCLTKRSITFLCGDAGPLAVAAVLYHKMNNEKQAEDCITRLIH : .:: . :::..: :. : .::::::::::::.::.:::. .. ....:.:.:.. NP_061 CDQTYLLRSLDYVKRTLRNLNGRRVTFLCGDAGPLAVGAVIYHKLRSDCESQECVTKLLQ 130 140 150 160 170 180 140 150 160 170 180 190 pF1KE3 LNKI----DPHAPNEMLYGRIGYIYALLFVNKNFGVEKIPQSHIQQICETILTSGENLAR :.. . :.:.:::: ::.::::..: ..: . .: :... ..:. ::..:.: NP_061 LQRSVVCQESDLPDELLYGRAGYLYALLYLNTEIGPGTVCESAIKEVVNAIIESGKTLSR 190 200 210 220 230 240 200 210 220 230 240 250 pF1KE3 KRNFTAKSPLMYEWYQEYYVGAAHGLAGIYYYLMQPSLQVSQGKLHSLVKPSVDYVCQLK .. : . ::.:.:... :::::::.:::::.::::. .:.: : .::::.::: . : NP_061 EERKTERCPLLYQWHRKQYVGAAHGMAGIYYMLMQPAAKVDQETLTEMVKPSIDYVRHKK 250 260 270 280 290 300 260 270 280 290 300 310 pF1KE3 FPSGNYPPCIGDNRDLLVHWCHGAPGVIYMLIQAYKVFREEKYLCDAYQCADVIWQYGLL : ::::: .... : ::::::::::::.::.::::::.::::: .:..:.::::: ::: NP_061 FRSGNYPSSLSNETDRLVHWCHGAPGVIHMLMQAYKVFKEEKYLKEAMECSDVIWQRGLL 310 320 330 340 350 360 320 330 340 350 360 370 pF1KE3 KKGYGLCHGSAGNAYAFLTLYNLTQDMKYLYRACKFAEWCLEYGEHGCRTPDTPFSLFEG .::::.:::.:::.:.::.:: :::: ::::::::::::::.:: :::: :: :.::::: NP_061 RKGYGICHGTAGNGYSFLSLYRLTQDKKYLYRACKFAEWCLDYGAHGCRIPDRPYSLFEG 370 380 390 400 410 420 380 390 pF1KE3 MAGTIYFLADLLVPTKARFPAFEL :::.:.::.:.: : .::::::: NP_061 MAGAIHFLSDVLGPETSRFPAFELDSSKRD 430 440 450 399 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 22:32:23 2016 done: Sun Nov 6 22:32:24 2016 Total Scan time: 6.220 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]