FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6308, 393 aa 1>>>pF1KE6308 393 - 393 aa - 393 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.1323+/-0.00041; mu= 18.3948+/- 0.026 mean_var=69.0826+/-13.480, 0's: 0 Z-trim(111.1): 31 B-trim: 27 in 2/51 Lambda= 0.154308 statistics sampled from 19630 (19633) to 19630 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.596), E-opt: 0.2 (0.23), width: 16 Scan time: 6.780 The best scores are: opt bits E(85289) NP_002141 (OMIM: 140350,276710,609695) 4-hydroxyph ( 393) 2630 594.8 1.2e-169 NP_001165464 (OMIM: 140350,276710,609695) 4-hydrox ( 354) 2357 534.0 2.2e-151 >>NP_002141 (OMIM: 140350,276710,609695) 4-hydroxyphenyl (393 aa) initn: 2630 init1: 2630 opt: 2630 Z-score: 3166.7 bits: 594.8 E(85289): 1.2e-169 Smith-Waterman score: 2630; 100.0% identity (100.0% similar) in 393 aa overlap (1-393:1-393) 10 20 30 40 50 60 pF1KE6 MTTYSDKGAKPERGRFLHFHSVTFWVGNAKQAASFYCSKMGFEPLAYRGLETGSREVVSH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_002 MTTYSDKGAKPERGRFLHFHSVTFWVGNAKQAASFYCSKMGFEPLAYRGLETGSREVVSH 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 VIKQGKIVFVLSSALNPWNKEMGDHLVKHGDGVKDIAFEVEDCDYIVQKARERGAKIMRE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_002 VIKQGKIVFVLSSALNPWNKEMGDHLVKHGDGVKDIAFEVEDCDYIVQKARERGAKIMRE 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 PWVEQDKFGKVKFAVLQTYGDTTHTLVEKMNYIGQFLPGYEAPAFMDPLLPKLPKCSLEM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_002 PWVEQDKFGKVKFAVLQTYGDTTHTLVEKMNYIGQFLPGYEAPAFMDPLLPKLPKCSLEM 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 IDHIVGNQPDQEMVSASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEESIKMPI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_002 IDHIVGNQPDQEMVSASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEESIKMPI 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE6 NEPAPGKKKSQIQEYVDYNGGAGVQHIALKTEDIITAIRHLRERGLEFLSVPSTYYKQLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_002 NEPAPGKKKSQIQEYVDYNGGAGVQHIALKTEDIITAIRHLRERGLEFLSVPSTYYKQLR 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE6 EKLKTAKIKVKENIDALEELKILVDYDEKGYLLQIFTKPVQDRPTLFLEVIQRHNHQGFG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_002 EKLKTAKIKVKENIDALEELKILVDYDEKGYLLQIFTKPVQDRPTLFLEVIQRHNHQGFG 310 320 330 340 350 360 370 380 390 pF1KE6 AGNFNSLFKAFEEEQNLRGNLTNMETNGVVPGM ::::::::::::::::::::::::::::::::: NP_002 AGNFNSLFKAFEEEQNLRGNLTNMETNGVVPGM 370 380 390 >>NP_001165464 (OMIM: 140350,276710,609695) 4-hydroxyphe (354 aa) initn: 2357 init1: 2357 opt: 2357 Z-score: 2838.9 bits: 534.0 E(85289): 2.2e-151 Smith-Waterman score: 2357; 100.0% identity (100.0% similar) in 354 aa overlap (40-393:1-354) 10 20 30 40 50 60 pF1KE6 KPERGRFLHFHSVTFWVGNAKQAASFYCSKMGFEPLAYRGLETGSREVVSHVIKQGKIVF :::::::::::::::::::::::::::::: NP_001 MGFEPLAYRGLETGSREVVSHVIKQGKIVF 10 20 30 70 80 90 100 110 120 pF1KE6 VLSSALNPWNKEMGDHLVKHGDGVKDIAFEVEDCDYIVQKARERGAKIMREPWVEQDKFG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 VLSSALNPWNKEMGDHLVKHGDGVKDIAFEVEDCDYIVQKARERGAKIMREPWVEQDKFG 40 50 60 70 80 90 130 140 150 160 170 180 pF1KE6 KVKFAVLQTYGDTTHTLVEKMNYIGQFLPGYEAPAFMDPLLPKLPKCSLEMIDHIVGNQP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 KVKFAVLQTYGDTTHTLVEKMNYIGQFLPGYEAPAFMDPLLPKLPKCSLEMIDHIVGNQP 100 110 120 130 140 150 190 200 210 220 230 240 pF1KE6 DQEMVSASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEESIKMPINEPAPGKKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 DQEMVSASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEESIKMPINEPAPGKKK 160 170 180 190 200 210 250 260 270 280 290 300 pF1KE6 SQIQEYVDYNGGAGVQHIALKTEDIITAIRHLRERGLEFLSVPSTYYKQLREKLKTAKIK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 SQIQEYVDYNGGAGVQHIALKTEDIITAIRHLRERGLEFLSVPSTYYKQLREKLKTAKIK 220 230 240 250 260 270 310 320 330 340 350 360 pF1KE6 VKENIDALEELKILVDYDEKGYLLQIFTKPVQDRPTLFLEVIQRHNHQGFGAGNFNSLFK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 VKENIDALEELKILVDYDEKGYLLQIFTKPVQDRPTLFLEVIQRHNHQGFGAGNFNSLFK 280 290 300 310 320 330 370 380 390 pF1KE6 AFEEEQNLRGNLTNMETNGVVPGM :::::::::::::::::::::::: NP_001 AFEEEQNLRGNLTNMETNGVVPGM 340 350 393 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 11:57:16 2016 done: Tue Nov 8 11:57:17 2016 Total Scan time: 6.780 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]