(Linear) (Six-base) MAPSORT of: KIEE4343.seq Check: 339 from: 1 to: 1062 KIEE4343.orf With 182 enzymes: SgfI * March 22, 2012 17:47 .. AarI CACCTGCnnnn'nnnn_ Cuts at: 0 365 1062 Size: 365 697 AccI GT'mk_AC Cuts at: 0 854 1062 Size: 854 208 AcuI CTGAAGnnnnnnnnnnnnnn_nn' Cuts at: 0 543 1062 Size: 543 519 AflIII A'CryG_T Cuts at: 0 573 1062 Size: 573 489 AlwNI CAG_nnn'CTG Cuts at: 0 750 1062 Size: 750 312 ApoI r'AATT_y Cuts at: 0 731 1062 Size: 731 331 AvaI C'yCGr_G Cuts at: 0 220 606 1062 Size: 220 386 456 Fragments arranged by size: 456 386 220 BanII G_rGCy'C Cuts at: 0 532 1062 Size: 532 530 BclI T'GATC_A Cuts at: 0 809 1062 Size: 809 253 BglII A'GATC_T Cuts at: 0 554 1062 Size: 554 508 BmrI ACTGGGnnnn_n' Cuts at: 0 70 372 1062 Size: 70 302 690 Fragments arranged by size: 690 302 70 BplI GAGnnnnnCTCnnnnnnnn_nnnnn' Cuts at: 0 546 1062 Size: 546 516 BpmI CTGGAGnnnnnnnnnnnnnn_nn' Cuts at: 0 178 310 1062 Size: 178 132 752 Fragments arranged by size: 752 178 132 BsaHI Gr'CG_yC Cuts at: 0 203 467 1062 Size: 203 264 595 Fragments arranged by size: 595 264 203 BsaWI w'CCGG_w Cuts at: 0 633 1062 Size: 633 429 BsgI GTGCAGnnnnnnnnnnnnnn_nn' Cuts at: 0 1 163 337 343 415 759 1062 Size: 1 162 174 6 72 344 303 Fragments arranged by size: 344 303 174 162 72 6 1 BsiEI CG_ry'CG Cuts at: 0 29 1062 Size: 29 1033 BsiHKAI G_wGCw'C Cuts at: 0 35 398 704 1062 Size: 35 363 306 358 Fragments arranged by size: 363 358 306 35 BsmI GAATG_Cn' Cuts at: 0 598 935 1062 Size: 598 337 127 Fragments arranged by size: 598 337 127 Bsp1286I G_dGCh'C Cuts at: 0 35 398 532 704 1062 Size: 35 363 134 172 358 Fragments arranged by size: 363 358 172 134 35 BspEI T'CCGG_A Cuts at: 0 633 1062 Size: 633 429 BspMI ACCTGCnnnn'nnnn_ Cuts at: 0 185 305 365 816 1062 Size: 185 120 60 451 246 Fragments arranged by size: 451 246 185 120 60 BstXI CCAn_nnnn'nTGG Cuts at: 0 1041 1062 Size: 1041 21 BstYI r'GATC_y Cuts at: 0 554 1062 Size: 554 508 BstZ17I GTA'TAC Cuts at: 0 855 1062 Size: 855 207 BtsI GCAGTG_nn' Cuts at: 0 473 1062 Size: 473 589 EaeI y'GGCC_r Cuts at: 0 26 276 1062 Size: 26 250 786 Fragments arranged by size: 786 250 26 EagI C'GGCC_G Cuts at: 0 26 1062 Size: 26 1036 EarI CTCTTCn'nnn_ Cuts at: 0 617 982 1062 Size: 617 365 80 Fragments arranged by size: 617 365 80 Eco57MI CTGrAGnnnnnnnnnnnnnn_nn' Cuts at: 0 178 310 543 1062 Size: 178 132 233 519 Fragments arranged by size: 519 233 178 132 EcoO109I rG'GnC_Cy Cuts at: 0 153 321 668 1062 Size: 153 168 347 394 Fragments arranged by size: 394 347 168 153 FalI AAGnnnnnCTTnnnnnnnn_nnnnn' Cuts at: 0 646 1062 Size: 646 416 Hin4I GAynnnnnvTCnnnnnnnn_nnnnn' Cuts at: 0 546 578 794 826 1062 Size: 546 32 216 32 236 Fragments arranged by size: 546 236 216 32 32 MscI TGG'CCA Cuts at: 0 278 1062 Size: 278 784 MslI CAynn'nnrTG Cuts at: 0 523 781 1039 1062 Size: 523 258 258 23 Fragments arranged by size: 523 258 258 23 MspA1I CmG'CkG Cuts at: 0 351 407 646 747 1062 Size: 351 56 239 101 315 Fragments arranged by size: 351 315 239 101 56 NspI r_CATG'y Cuts at: 0 312 577 1062 Size: 312 265 485 Fragments arranged by size: 485 312 265 PciI A'CATG_T Cuts at: 0 573 1062 Size: 573 489 PpiI GAACnnnnnCTCnnnnnnnn_nnnnn' Cuts at: 0 286 318 1062 Size: 286 32 744 Fragments arranged by size: 744 286 32 PpuMI rG'GwC_Cy Cuts at: 0 668 1062 Size: 668 394 PsiI TTA'TAA Cuts at: 0 446 1062 Size: 446 616 PspXI vC'TCGA_Gb Cuts at: 0 220 1062 Size: 220 842 PstI C_TGCA'G Cuts at: 0 164 1062 Size: 164 898 PvuII CAG'CTG Cuts at: 0 351 747 1062 Size: 351 396 315 Fragments arranged by size: 396 351 315 SanDI GG'GwC_CC Cuts at: 0 668 1062 Size: 668 394 SapI GCTCTTCn'nnn_ Cuts at: 0 617 1062 Size: 617 445 SfcI C'TryA_G Cuts at: 0 160 336 1062 Size: 160 176 726 Fragments arranged by size: 726 176 160 SmaI CCC'GGG Cuts at: 0 608 1062 Size: 608 454 SmlI C'TyrA_G Cuts at: 0 220 1062 Size: 220 842 SspI AAT'ATT Cuts at: 0 652 1062 Size: 652 410 StuI AGG'CCT Cuts at: 0 497 1062 Size: 497 565 StyI C'CwwG_G Cuts at: 0 228 1062 Size: 228 834 TatI w'GTAC_w Cuts at: 0 581 770 883 1062 Size: 581 189 113 179 Fragments arranged by size: 581 189 179 113 Tth111I GACn'n_nGTC Cuts at: 0 899 1062 Size: 899 163 XhoI C'TCGA_G Cuts at: 0 220 1062 Size: 220 842 XmaI C'CCGG_G Cuts at: 0 606 1062 Size: 606 456 Enzymes that do cut: AarI AccI AcuI AflIII AlwNI ApoI AvaI BanII BclI BglII BmrI BplI BpmI BsaHI BsaWI BsgI BsiEI BsiHKAI BsmI Bsp1286I BspEI BspMI BstXI BstYI BstZ17I BtsI EaeI EagI EarI Eco57MI EcoO109I FalI Hin4I MscI MslI MspA1I NspI PciI PpiI PpuMI PsiI PspXI PstI PvuII SanDI SapI SfcI SmaI SmlI SspI StuI StyI TatI Tth111I XhoI XmaI Enzymes that do not cut: AatII Acc65I AclI AfeI AflII AgeI AhdI AleI AlfI AloI ApaI ApaLI AscI AseI AsiSI AvrII BaeI BamHI BanI BbeI BbsI BbvCI BcgI BciVI BfrBI BglI BlpI Bme1580I BmgBI BmtI Bpu10I BpuEI BsaI BsaAI BsaBI BsaXI BseRI BseYI BsiWI BsmBI BspHI BsrBI BsrDI BsrFI BsrGI BssHII BssSI BstAPI BstBI BstEII Bsu36I BtgI BtgZI ClaI CspCI DraI DraIII DrdI EciI EcoICRI EcoNI EcoRI EcoRV FseI FspI FspAI HaeII HincII HindIII HpaI KasI KpnI MfeI MluI MmeI NaeI NarI NcoI NdeI NgoMIV NheI NotI NruI NsiI PacI PasI PflMI PfoI PmeI PmlI PshAI PspOMI PsrI PvuI RsrII SacI SacII SalI SbfI ScaI SexAI SfiI SfoI SgfI SgrAI SnaBI SpeI SphI SrfI SwaI TaqII TstI XbaI XcmI XmnI ZraI