FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6231, 248 aa 1>>>pF1KE6231 248 - 248 aa - 248 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.8548+/-0.000896; mu= 16.7765+/- 0.054 mean_var=60.1070+/-12.277, 0's: 0 Z-trim(104.5): 33 B-trim: 0 in 0/52 Lambda= 0.165429 statistics sampled from 7887 (7919) to 7887 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.614), E-opt: 0.2 (0.243), width: 16 Scan time: 2.250 The best scores are: opt bits E(32554) CCDS7981.1 MS4A6A gene_id:64231|Hs108|chr11 ( 248) 1581 385.7 1.5e-107 CCDS81568.1 MS4A6A gene_id:64231|Hs108|chr11 ( 276) 1581 385.7 1.7e-107 CCDS44615.1 MS4A6A gene_id:64231|Hs108|chr11 ( 225) 1376 336.8 7.7e-93 CCDS58134.1 MS4A6A gene_id:64231|Hs108|chr11 ( 253) 1376 336.8 8.4e-93 CCDS44616.1 MS4A6A gene_id:64231|Hs108|chr11 ( 178) 912 226.0 1.4e-59 CCDS7985.1 MS4A7 gene_id:58475|Hs108|chr11 ( 240) 446 114.8 5.3e-26 CCDS7984.1 MS4A6E gene_id:245802|Hs108|chr11 ( 147) 293 78.2 3.5e-15 CCDS7986.1 MS4A7 gene_id:58475|Hs108|chr11 ( 195) 250 68.0 5.4e-12 CCDS7987.1 MS4A5 gene_id:64232|Hs108|chr11 ( 200) 235 64.4 6.6e-11 >>CCDS7981.1 MS4A6A gene_id:64231|Hs108|chr11 (248 aa) initn: 1581 init1: 1581 opt: 1581 Z-score: 2044.1 bits: 385.7 E(32554): 1.5e-107 Smith-Waterman score: 1581; 99.6% identity (100.0% similar) in 248 aa overlap (1-248:1-248) 10 20 30 40 50 60 pF1KE6 MTSQPVPNETIIVLPSNVINFSQAEKPEPTNQGQDSLKKHLHAEIKVIGTIQILCGMMVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS79 MTSQPVPNETIIVLPSNVINFSQAEKPEPTNQGQDSLKKHLHAEIKVIGTIQILCGMMVL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 SLGIILASASFSPNFTQVTSTLLNSAYPFIGPFFFIISGSLSIATEKRLTKLLVHSSLVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS79 SLGIILASASFSPNFTQVTSTLLNSAYPFIGPFFFIISGSLSIATEKRLTKLLVHSSLVG 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 SILSALSALVGFIILSVKQATLNPASLQCELDKNNIPTRSYVSYFYHDSLYTTDCYTAKA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS79 SILSALSALVGFIILSVKQATLNPASLQCELDKNNIPTRSYVSYFYHDSLYTTDCYTAKA 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 SLAGSLSLMLICTLLEFCLAVLTAVLRWKQAYSDFPGSVLFLPHSYIGNSGMSSKMTHDC ::::.::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS79 SLAGTLSLMLICTLLEFCLAVLTAVLRWKQAYSDFPGSVLFLPHSYIGNSGMSSKMTHDC 190 200 210 220 230 240 pF1KE6 GYEELLTS :::::::: CCDS79 GYEELLTS >>CCDS81568.1 MS4A6A gene_id:64231|Hs108|chr11 (276 aa) initn: 1581 init1: 1581 opt: 1581 Z-score: 2043.4 bits: 385.7 E(32554): 1.7e-107 Smith-Waterman score: 1581; 99.6% identity (100.0% similar) in 248 aa overlap (1-248:29-276) 10 20 30 pF1KE6 MTSQPVPNETIIVLPSNVINFSQAEKPEPTNQ :::::::::::::::::::::::::::::::: CCDS81 MVLLKLLEVYRKGSAGTFHKSTIFGNTIMTSQPVPNETIIVLPSNVINFSQAEKPEPTNQ 10 20 30 40 50 60 40 50 60 70 80 90 pF1KE6 GQDSLKKHLHAEIKVIGTIQILCGMMVLSLGIILASASFSPNFTQVTSTLLNSAYPFIGP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 GQDSLKKHLHAEIKVIGTIQILCGMMVLSLGIILASASFSPNFTQVTSTLLNSAYPFIGP 70 80 90 100 110 120 100 110 120 130 140 150 pF1KE6 FFFIISGSLSIATEKRLTKLLVHSSLVGSILSALSALVGFIILSVKQATLNPASLQCELD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 FFFIISGSLSIATEKRLTKLLVHSSLVGSILSALSALVGFIILSVKQATLNPASLQCELD 130 140 150 160 170 180 160 170 180 190 200 210 pF1KE6 KNNIPTRSYVSYFYHDSLYTTDCYTAKASLAGSLSLMLICTLLEFCLAVLTAVLRWKQAY ::::::::::::::::::::::::::::::::.::::::::::::::::::::::::::: CCDS81 KNNIPTRSYVSYFYHDSLYTTDCYTAKASLAGTLSLMLICTLLEFCLAVLTAVLRWKQAY 190 200 210 220 230 240 220 230 240 pF1KE6 SDFPGSVLFLPHSYIGNSGMSSKMTHDCGYEELLTS :::::::::::::::::::::::::::::::::::: CCDS81 SDFPGSVLFLPHSYIGNSGMSSKMTHDCGYEELLTS 250 260 270 >>CCDS44615.1 MS4A6A gene_id:64231|Hs108|chr11 (225 aa) initn: 1373 init1: 1373 opt: 1376 Z-score: 1780.3 bits: 336.8 E(32554): 7.7e-93 Smith-Waterman score: 1376; 99.1% identity (99.5% similar) in 221 aa overlap (1-220:1-221) 10 20 30 40 50 60 pF1KE6 MTSQPVPNETIIVLPSNVINFSQAEKPEPTNQGQDSLKKHLHAEIKVIGTIQILCGMMVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 MTSQPVPNETIIVLPSNVINFSQAEKPEPTNQGQDSLKKHLHAEIKVIGTIQILCGMMVL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 SLGIILASASFSPNFTQVTSTLLNSAYPFIGPFFFIISGSLSIATEKRLTKLLVHSSLVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 SLGIILASASFSPNFTQVTSTLLNSAYPFIGPFFFIISGSLSIATEKRLTKLLVHSSLVG 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 SILSALSALVGFIILSVKQATLNPASLQCELDKNNIPTRSYVSYFYHDSLYTTDCYTAKA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 SILSALSALVGFIILSVKQATLNPASLQCELDKNNIPTRSYVSYFYHDSLYTTDCYTAKA 130 140 150 160 170 180 190 200 210 220 230 pF1KE6 SLAGSLSLMLICTLLEFCLAVLTAVLRWKQAYSDFPG-SVLFLPHSYIGNSGMSSKMTHD ::::.:::::::::::::::::::::::::::::::: ::: CCDS44 SLAGTLSLMLICTLLEFCLAVLTAVLRWKQAYSDFPGVSVLAGFT 190 200 210 220 240 pF1KE6 CGYEELLTS >>CCDS58134.1 MS4A6A gene_id:64231|Hs108|chr11 (253 aa) initn: 1373 init1: 1373 opt: 1376 Z-score: 1779.6 bits: 336.8 E(32554): 8.4e-93 Smith-Waterman score: 1376; 99.1% identity (99.5% similar) in 221 aa overlap (1-220:29-249) 10 20 30 pF1KE6 MTSQPVPNETIIVLPSNVINFSQAEKPEPTNQ :::::::::::::::::::::::::::::::: CCDS58 MVLLKLLEVYRKGSAGTFHKSTIFGNTIMTSQPVPNETIIVLPSNVINFSQAEKPEPTNQ 10 20 30 40 50 60 40 50 60 70 80 90 pF1KE6 GQDSLKKHLHAEIKVIGTIQILCGMMVLSLGIILASASFSPNFTQVTSTLLNSAYPFIGP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 GQDSLKKHLHAEIKVIGTIQILCGMMVLSLGIILASASFSPNFTQVTSTLLNSAYPFIGP 70 80 90 100 110 120 100 110 120 130 140 150 pF1KE6 FFFIISGSLSIATEKRLTKLLVHSSLVGSILSALSALVGFIILSVKQATLNPASLQCELD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 FFFIISGSLSIATEKRLTKLLVHSSLVGSILSALSALVGFIILSVKQATLNPASLQCELD 130 140 150 160 170 180 160 170 180 190 200 210 pF1KE6 KNNIPTRSYVSYFYHDSLYTTDCYTAKASLAGSLSLMLICTLLEFCLAVLTAVLRWKQAY ::::::::::::::::::::::::::::::::.::::::::::::::::::::::::::: CCDS58 KNNIPTRSYVSYFYHDSLYTTDCYTAKASLAGTLSLMLICTLLEFCLAVLTAVLRWKQAY 190 200 210 220 230 240 220 230 240 pF1KE6 SDFPG-SVLFLPHSYIGNSGMSSKMTHDCGYEELLTS ::::: ::: CCDS58 SDFPGVSVLAGFT 250 >>CCDS44616.1 MS4A6A gene_id:64231|Hs108|chr11 (178 aa) initn: 912 init1: 912 opt: 912 Z-score: 1183.3 bits: 226.0 E(32554): 1.4e-59 Smith-Waterman score: 912; 100.0% identity (100.0% similar) in 148 aa overlap (1-148:1-148) 10 20 30 40 50 60 pF1KE6 MTSQPVPNETIIVLPSNVINFSQAEKPEPTNQGQDSLKKHLHAEIKVIGTIQILCGMMVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 MTSQPVPNETIIVLPSNVINFSQAEKPEPTNQGQDSLKKHLHAEIKVIGTIQILCGMMVL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 SLGIILASASFSPNFTQVTSTLLNSAYPFIGPFFFIISGSLSIATEKRLTKLLVHSSLVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 SLGIILASASFSPNFTQVTSTLLNSAYPFIGPFFFIISGSLSIATEKRLTKLLVHSSLVG 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 SILSALSALVGFIILSVKQATLNPASLQCELDKNNIPTRSYVSYFYHDSLYTTDCYTAKA :::::::::::::::::::::::::::: CCDS44 SILSALSALVGFIILSVKQATLNPASLQWNSLSDADLHSAGILPSCAHCCAAVETGLL 130 140 150 160 170 >>CCDS7985.1 MS4A7 gene_id:58475|Hs108|chr11 (240 aa) initn: 448 init1: 293 opt: 446 Z-score: 580.3 bits: 114.8 E(32554): 5.3e-26 Smith-Waterman score: 446; 39.8% identity (69.2% similar) in 201 aa overlap (19-218:19-217) 10 20 30 40 50 60 pF1KE6 MTSQPVPNETIIVLPSNVINFSQAEKPEPTNQGQDSLKKHLHAEIKVIGTIQILCGMMVL :.. : ::: :..: :.. : .: :.::.:::: ... CCDS79 MLLQSQTMGVSHSFTPKGITIPQREKPGHMYQNEDYLQNGLPTETTVLGTVQILCCLLIS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 SLGIILASASFSPNFTQVTSTLLNSAYPFIGPFFFIISGSLSIATEKRLTKLLVHSSLVG ::: ::. : . .:. . :: : :.:::.: . : :.::::: . :. :: . :::.. CCDS79 SLGAILVFAPYPSHFNPAISTTLMSGYPFLGALCFGITGSLSIISGKQSTKPFDLSSLTS 70 80 90 100 110 120 130 140 150 160 170 pF1KE6 SILSALSALVGFIILSVKQATLNPASLQCELDKNNIPTRSYVSYFYHDSLYTT-DCYTAK . .:...: .:...:. ....: :: .: . . . . : :.: .: :: .. CCDS79 NAVSSVTAGAGLFLLADSMVALRTASQHCGSEMDYLSSLPYSEYYY--PIYEIKDCLLTS 130 140 150 160 170 180 190 200 210 220 230 pF1KE6 ASLAGSLSLMLICTLLEFCLAVLTAVLRWKQAYSDFPGSVLFLPHSYIGNSGMSSKMTHD .::.: : .::: :.::. ::. ..:. ::: ::. ::: CCDS79 VSLTGVLVVMLIFTVLELLLAAYSSVFWWKQLYSNNPGSSFSSTQSQDHIQQVKKSSSRS 180 190 200 210 220 230 240 pF1KE6 CGYEELLTS CCDS79 WI 240 >>CCDS7984.1 MS4A6E gene_id:245802|Hs108|chr11 (147 aa) initn: 512 init1: 277 opt: 293 Z-score: 386.1 bits: 78.2 E(32554): 3.5e-15 Smith-Waterman score: 594; 55.2% identity (64.8% similar) in 210 aa overlap (1-210:1-145) 10 20 30 40 50 60 pF1KE6 MTSQPVPNETIIVLPSNVINFSQAEKPEPTNQGQDSLKKHLHAEIKVIGTIQILCGMMVL :::::. :::::.::::::::::::::::::::::::::.:.:..:::: CCDS79 MTSQPISNETIIMLPSNVINFSQAEKPEPTNQGQDSLKKRLQAKVKVIG----------- 10 20 30 40 70 80 90 100 110 120 pF1KE6 SLGIILASASFSPNFTQVTSTLLNSAYPFIGPFFFIISGSLSIATEKRLTKLLVHSSLVG :::::.: CCDS79 -----------------------------------------------------VHSSLAG 50 130 140 150 160 170 180 pF1KE6 SILSALSALVGFIILSVKQATLNPASLQCELDKNNIPTRSYVSYFYHDSLYTTDCYTAKA :::::::::::::.:::. :.::::::::.::...:::: .:: :: : :: ::. ::: CCDS79 SILSALSALVGFILLSVNPAALNPASLQCKLDEKDIPTRLLLSYDYH-SPYTMDCHRAKA 60 70 80 90 100 110 190 200 210 220 230 240 pF1KE6 SLAGSLSLMLICTLLEFCLAVLTAVLRWKQAYSDFPGSVLFLPHSYIGNSGMSSKMTHDC ::::.:::::. :.::::::::::::.::: CCDS79 SLAGTLSLMLVSTVLEFCLAVLTAVLQWKQTV 120 130 140 >>CCDS7986.1 MS4A7 gene_id:58475|Hs108|chr11 (195 aa) initn: 243 init1: 145 opt: 250 Z-score: 328.8 bits: 68.0 E(32554): 5.4e-12 Smith-Waterman score: 250; 38.4% identity (69.6% similar) in 125 aa overlap (95-218:50-172) 70 80 90 100 110 120 pF1KE6 ILASASFSPNFTQVTSTLLNSAYPFIGPFFFIISGSLSIATEKRLTKLLVHSSLVGSILS : :.::::: . :. :: . :::... .: CCDS79 TIPQREKPGHMYQNEDYLQNGLPTETTVLGFGITGSLSIISGKQSTKPFDLSSLTSNAVS 20 30 40 50 60 70 130 140 150 160 170 180 pF1KE6 ALSALVGFIILSVKQATLNPASLQCELDKNNIPTRSYVSYFYHDSLYTT-DCYTAKASLA ...: .:...:. ....: :: .: . . . . : :.: .: :: ...::. CCDS79 SVTAGAGLFLLADSMVALRTASQHCGSEMDYLSSLPYSEYYY--PIYEIKDCLLTSVSLT 80 90 100 110 120 130 190 200 210 220 230 240 pF1KE6 GSLSLMLICTLLEFCLAVLTAVLRWKQAYSDFPGSVLFLPHSYIGNSGMSSKMTHDCGYE : : .::: :.::. ::. ..:. ::: ::. ::: CCDS79 GVLVVMLIFTVLELLLAAYSSVFWWKQLYSNNPGSSFSSTQSQDHIQQVKKSSSRSWI 140 150 160 170 180 190 pF1KE6 ELLTS >>CCDS7987.1 MS4A5 gene_id:64232|Hs108|chr11 (200 aa) initn: 194 init1: 133 opt: 235 Z-score: 309.3 bits: 64.4 E(32554): 6.6e-11 Smith-Waterman score: 239; 26.4% identity (62.5% similar) in 208 aa overlap (1-206:1-187) 10 20 30 40 50 pF1KE6 MTSQPVPNETIIVLPSNVI--NFSQAEKPEPTNQGQDSLKKHLHAEIKVIGTIQILCGMM : :. . . ...:.: .. .. ..: : . :. :.: . ..:..:::::: :.: CCDS79 MDSSTAHSPVFLVFPPEITASEYESTELSATTFSTQSPLQKLFARKMKILGTIQILFGIM 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE6 VLSLGIILASASFSPNFTQVTSTLLNSAYPFIGPFFFIISGSLSIATEKRLTKLLVHSSL ..:.:.:. . ..: . . .: :.::: : .:: ::.. ::.... :. :. : CCDS79 TFSFGVIFLFTLLKP-YPRFPFIFL-SGYPFWGSVLFINSGAFLIAVKRKTTETLIILSR 70 80 90 100 110 120 130 140 150 160 170 pF1KE6 VGSILSALSALVGFIILSVKQATLNPASLQCELDKNNIPTRSYVSYFYHDSLYTTDCYTA . ..::::.:..:.:.:. . ::.: :. . :.. ..: .. CCDS79 IMNFLSALGAIAGIILLT----------FGFILDQN------YICGYSHQN---SQCKAV 120 130 140 150 180 190 200 210 220 230 pF1KE6 KASLAGSLSLMLICTLLEFCLAVLTAVLRWKQAYSDFPGSVLFLPHSYIGNSGMSSKMTH . . : : .. ...:. ... ..: CCDS79 TVLFLGILITLMTFSIIELFISLPFSILGCHSEDCDCEQCC 160 170 180 190 200 248 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 11:18:11 2016 done: Tue Nov 8 11:18:11 2016 Total Scan time: 2.250 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]