FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE4324, 326 aa 1>>>pF1KE4324 326 - 326 aa - 326 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.8020+/-0.000361; mu= 15.7742+/- 0.023 mean_var=131.6654+/-27.212, 0's: 0 Z-trim(118.2): 478 B-trim: 1060 in 1/52 Lambda= 0.111773 statistics sampled from 30332 (30864) to 30332 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.699), E-opt: 0.2 (0.362), width: 16 Scan time: 6.720 The best scores are: opt bits E(85289) NP_001994 (OMIM: 601252) ficolin-1 precursor [Homo ( 326) 2279 378.5 1e-104 XP_011516694 (OMIM: 601624) PREDICTED: ficolin-2 i ( 302) 1422 240.3 3.8e-63 NP_004099 (OMIM: 601624) ficolin-2 isoform a precu ( 313) 1422 240.3 3.9e-63 XP_006717078 (OMIM: 601624) PREDICTED: ficolin-2 i ( 264) 1380 233.5 3.9e-61 NP_056652 (OMIM: 601624) ficolin-2 isoform b precu ( 275) 1380 233.5 4e-61 NP_003656 (OMIM: 604973,613860) ficolin-3 isoform ( 299) 955 165.0 1.8e-40 NP_775628 (OMIM: 604973,613860) ficolin-3 isoform ( 288) 925 160.1 5e-39 NP_116232 (OMIM: 613357) fibrinogen C domain-conta ( 461) 779 136.8 8.3e-32 NP_001138578 (OMIM: 613357) fibrinogen C domain-co ( 461) 779 136.8 8.3e-32 NP_002395 (OMIM: 600596) microfibril-associated gl ( 255) 728 128.3 1.7e-29 NP_001185624 (OMIM: 600596) microfibril-associated ( 279) 728 128.4 1.8e-29 NP_001315564 (OMIM: 601995) tenascin-R isoform 2 [ (1025) 701 124.7 8.5e-28 XP_011508251 (OMIM: 601995) PREDICTED: tenascin-R (1199) 701 124.7 9.4e-28 XP_016857707 (OMIM: 601995) PREDICTED: tenascin-R (1358) 701 124.8 1e-27 NP_003276 (OMIM: 601995) tenascin-R isoform 1 prec (1358) 701 124.8 1e-27 XP_016857708 (OMIM: 601995) PREDICTED: tenascin-R (1358) 701 124.8 1e-27 NP_115859 (OMIM: 600985,606408,615963) tenascin-X ( 673) 670 119.4 2.1e-26 NP_061978 (OMIM: 600985,606408,615963) tenascin-X (4242) 670 120.4 6.8e-26 NP_036230 (OMIM: 605001) angiopoietin-related prot ( 493) 652 116.4 1.3e-25 NP_001300980 (OMIM: 601667) angiopoietin-1 isoform ( 298) 641 114.4 3.1e-25 NP_001186788 (OMIM: 601667) angiopoietin-1 isoform ( 497) 641 114.6 4.3e-25 NP_001137 (OMIM: 601667) angiopoietin-1 isoform 1 ( 498) 641 114.6 4.3e-25 XP_005252032 (OMIM: 187380,615629) PREDICTED: tena (1564) 644 115.7 6.5e-25 XP_005252031 (OMIM: 187380,615629) PREDICTED: tena (1655) 644 115.7 6.8e-25 XP_006717164 (OMIM: 187380,615629) PREDICTED: tena (1655) 644 115.7 6.8e-25 XP_011516930 (OMIM: 187380,615629) PREDICTED: tena (1746) 644 115.7 7e-25 XP_011516931 (OMIM: 187380,615629) PREDICTED: tena (1746) 644 115.7 7e-25 XP_005252030 (OMIM: 187380,615629) PREDICTED: tena (1837) 644 115.8 7.2e-25 XP_011516928 (OMIM: 187380,615629) PREDICTED: tena (1929) 644 115.8 7.5e-25 XP_011516927 (OMIM: 187380,615629) PREDICTED: tena (2019) 644 115.8 7.7e-25 XP_006717161 (OMIM: 187380,615629) PREDICTED: tena (2019) 644 115.8 7.7e-25 XP_016870170 (OMIM: 187380,615629) PREDICTED: tena (2020) 644 115.8 7.7e-25 XP_006717160 (OMIM: 187380,615629) PREDICTED: tena (2110) 644 115.8 7.9e-25 XP_005252029 (OMIM: 187380,615629) PREDICTED: tena (2110) 644 115.8 7.9e-25 NP_002151 (OMIM: 187380,615629) tenascin precursor (2201) 644 115.9 8.1e-25 XP_016870169 (OMIM: 187380,615629) PREDICTED: tena (2292) 644 115.9 8.4e-25 XP_016870168 (OMIM: 187380,615629) PREDICTED: tena (2293) 644 115.9 8.4e-25 XP_006717159 (OMIM: 187380,615629) PREDICTED: tena (2293) 644 115.9 8.4e-25 XP_016870167 (OMIM: 187380,615629) PREDICTED: tena (2384) 644 115.9 8.6e-25 XP_005245634 (OMIM: 603874) PREDICTED: angiopoieti ( 491) 604 108.6 2.7e-23 NP_004664 (OMIM: 603874) angiopoietin-related prot ( 491) 604 108.6 2.7e-23 XP_011527541 (OMIM: 603705) PREDICTED: angiopoieti ( 451) 594 107.0 7.8e-23 NP_057069 (OMIM: 603705) angiopoietin-4 isoform 1 ( 503) 594 107.0 8.4e-23 XP_016868807 (OMIM: 601922) PREDICTED: angiopoieti ( 443) 587 105.9 1.7e-22 NP_001112360 (OMIM: 601922) angiopoietin-2 isoform ( 444) 587 105.9 1.7e-22 NP_001112359 (OMIM: 601922) angiopoietin-2 isoform ( 495) 587 105.9 1.8e-22 NP_001138 (OMIM: 601922) angiopoietin-2 isoform a ( 496) 587 105.9 1.8e-22 NP_114123 (OMIM: 609336) angiopoietin-related prot ( 470) 576 104.1 6e-22 NP_001308340 (OMIM: 609336) angiopoietin-related p ( 470) 576 104.1 6e-22 XP_016882836 (OMIM: 609336) PREDICTED: angiopoieti ( 470) 576 104.1 6e-22 >>NP_001994 (OMIM: 601252) ficolin-1 precursor [Homo sap (326 aa) initn: 2279 init1: 2279 opt: 2279 Z-score: 2001.1 bits: 378.5 E(85289): 1e-104 Smith-Waterman score: 2279; 100.0% identity (100.0% similar) in 326 aa overlap (1-326:1-326) 10 20 30 40 50 60 pF1KE4 MELSGATMARGLAVLLVLFLHIKNLPAQAADTCPEVKVVGLEGSDKLTILRGCPGLPGAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MELSGATMARGLAVLLVLFLHIKNLPAQAADTCPEVKVVGLEGSDKLTILRGCPGLPGAP 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 GPKGEAGVIGERGERGLPGAPGKAGPVGPKGDRGEKGMRGEKGDAGQSQSCATGPRNCKD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 GPKGEAGVIGERGERGLPGAPGKAGPVGPKGDRGEKGMRGEKGDAGQSQSCATGPRNCKD 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 LLDRGYFLSGWHTIYLPDCRPLTVLCDMDTDGGGWTVFQRRMDGSVDFYRDWAAYKQGFG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LLDRGYFLSGWHTIYLPDCRPLTVLCDMDTDGGGWTVFQRRMDGSVDFYRDWAAYKQGFG 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 SQLGEFWLGNDNIHALTAQGSSELRVDLVDFEGNHQFAKYKSFKVADEAEKYKLVLGAFV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 SQLGEFWLGNDNIHALTAQGSSELRVDLVDFEGNHQFAKYKSFKVADEAEKYKLVLGAFV 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 GGSAGNSLTGHNNNFFSTKDQDNDVSSSNCAEKFQGAWWYADCHASNLNGLYLMGPHESY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 GGSAGNSLTGHNNNFFSTKDQDNDVSSSNCAEKFQGAWWYADCHASNLNGLYLMGPHESY 250 260 270 280 290 300 310 320 pF1KE4 ANGINWSAAKGYKYSYKVSEMKVRPA :::::::::::::::::::::::::: NP_001 ANGINWSAAKGYKYSYKVSEMKVRPA 310 320 >>XP_011516694 (OMIM: 601624) PREDICTED: ficolin-2 isofo (302 aa) initn: 1420 init1: 1420 opt: 1422 Z-score: 1254.6 bits: 240.3 E(85289): 3.8e-63 Smith-Waterman score: 1679; 77.2% identity (86.4% similar) in 316 aa overlap (11-326:2-302) 10 20 30 40 50 60 pF1KE4 MELSGATMARGLAVLLVLFLHIKNLPAQAADTCPEVKVVGLEGSDKLTILRGCPGLPGAP : :.: . :: : . :::::::.:::::::::::::::::::::: XP_011 MGPALLALSFLWTMAL---TEDTCPEVKMVGLEGSDKLTILRGCPGLPGAP 10 20 30 40 70 80 90 100 110 120 pF1KE4 GPKGEAGVIGERGERGLPGAPGKAGPVGPKGDRGEKGMRGEKGDAGQSQSCATGPRNCKD :::::::. :.::::: :: :::::: ::.: :: : : ::::.::: XP_011 GPKGEAGTNGKRGERGPPGPPGKAGPPGPNGAPGEP------------QPCLTGPRTCKD 50 60 70 80 90 130 140 150 160 170 180 pF1KE4 LLDRGYFLSGWHTIYLPDCRPLTVLCDMDTDGGGWTVFQRRMDGSVDFYRDWAAYKQGFG :::::.:::::::::::::::::::::::::::::::::::.:::::::::::.:::::: XP_011 LLDRGHFLSGWHTIYLPDCRPLTVLCDMDTDGGGWTVFQRRVDGSVDFYRDWATYKQGFG 100 110 120 130 140 150 190 200 210 220 230 240 pF1KE4 SQLGEFWLGNDNIHALTAQGSSELRVDLVDFEGNHQFAKYKSFKVADEAEKYKLVLGAFV :.::::::::::::::::::.::::::::::: :.:::::.:::::::::::.::::::: XP_011 SRLGEFWLGNDNIHALTAQGTSELRVDLVDFEDNYQFAKYRSFKVADEAEKYNLVLGAFV 160 170 180 190 200 210 250 260 270 280 290 300 pF1KE4 GGSAGNSLTGHNNNFFSTKDQDNDVSSSNCAEKFQGAWWYADCHASNLNGLYLMGPHESY ::::.::: :::. :::::::::....::: ::::::: .::.::::: :: : : :. XP_011 EGSAGDSLTFHNNQSFSTKDQDNDLNTGNCAVMFQGAWWYKNCHVSNLNGRYLRGTHGSF 220 230 240 250 260 270 310 320 pF1KE4 ANGINWSAAKGYKYSYKVSEMKVRPA ::::::...:::.::::::::::::: XP_011 ANGINWKSGKGYNYSYKVSEMKVRPA 280 290 300 >>NP_004099 (OMIM: 601624) ficolin-2 isoform a precursor (313 aa) initn: 1420 init1: 1420 opt: 1422 Z-score: 1254.4 bits: 240.3 E(85289): 3.9e-63 Smith-Waterman score: 1719; 77.0% identity (86.8% similar) in 326 aa overlap (1-326:1-313) 10 20 30 40 50 60 pF1KE4 MELSGATMARGLAVLLVLFLHIKNLPAQAADTCPEVKVVGLEGSDKLTILRGCPGLPGAP :::. :. . : :.::. :: . ::::::::::.:::::::::::::::::::::: NP_004 MELDRAVGVLGAATLLLSFLGMA-WALQAADTCPEVKMVGLEGSDKLTILRGCPGLPGAP 10 20 30 40 50 70 80 90 100 110 120 pF1KE4 GPKGEAGVIGERGERGLPGAPGKAGPVGPKGDRGEKGMRGEKGDAGQSQSCATGPRNCKD :::::::. :.::::: :: :::::: ::.: :: : : ::::.::: NP_004 GPKGEAGTNGKRGERGPPGPPGKAGPPGPNGAPGEP------------QPCLTGPRTCKD 60 70 80 90 100 130 140 150 160 170 180 pF1KE4 LLDRGYFLSGWHTIYLPDCRPLTVLCDMDTDGGGWTVFQRRMDGSVDFYRDWAAYKQGFG :::::.:::::::::::::::::::::::::::::::::::.:::::::::::.:::::: NP_004 LLDRGHFLSGWHTIYLPDCRPLTVLCDMDTDGGGWTVFQRRVDGSVDFYRDWATYKQGFG 110 120 130 140 150 160 190 200 210 220 230 240 pF1KE4 SQLGEFWLGNDNIHALTAQGSSELRVDLVDFEGNHQFAKYKSFKVADEAEKYKLVLGAFV :.::::::::::::::::::.::::::::::: :.:::::.:::::::::::.::::::: NP_004 SRLGEFWLGNDNIHALTAQGTSELRVDLVDFEDNYQFAKYRSFKVADEAEKYNLVLGAFV 170 180 190 200 210 220 250 260 270 280 290 300 pF1KE4 GGSAGNSLTGHNNNFFSTKDQDNDVSSSNCAEKFQGAWWYADCHASNLNGLYLMGPHESY ::::.::: :::. :::::::::....::: ::::::: .::.::::: :: : : :. NP_004 EGSAGDSLTFHNNQSFSTKDQDNDLNTGNCAVMFQGAWWYKNCHVSNLNGRYLRGTHGSF 230 240 250 260 270 280 310 320 pF1KE4 ANGINWSAAKGYKYSYKVSEMKVRPA ::::::...:::.::::::::::::: NP_004 ANGINWKSGKGYNYSYKVSEMKVRPA 290 300 310 >>XP_006717078 (OMIM: 601624) PREDICTED: ficolin-2 isofo (264 aa) initn: 1371 init1: 1371 opt: 1380 Z-score: 1218.6 bits: 233.5 E(85289): 3.9e-61 Smith-Waterman score: 1401; 78.7% identity (87.8% similar) in 254 aa overlap (73-326:23-264) 50 60 70 80 90 100 pF1KE4 GSDKLTILRGCPGLPGAPGPKGEAGVIGERGERGLPGAPGKAGPVGPKGDRGEKGMRGEK :::: :: :::::: ::.: :: XP_006 MGPALLALSFLWTMALTEDTCPGERGPPGPPGKAGPPGPNGAPGEP------ 10 20 30 40 110 120 130 140 150 160 pF1KE4 GDAGQSQSCATGPRNCKDLLDRGYFLSGWHTIYLPDCRPLTVLCDMDTDGGGWTVFQRRM : : ::::.::::::::.:::::::::::::::::::::::::::::::::::. XP_006 ------QPCLTGPRTCKDLLDRGHFLSGWHTIYLPDCRPLTVLCDMDTDGGGWTVFQRRV 50 60 70 80 90 100 170 180 190 200 210 220 pF1KE4 DGSVDFYRDWAAYKQGFGSQLGEFWLGNDNIHALTAQGSSELRVDLVDFEGNHQFAKYKS :::::::::::.:::::::.::::::::::::::::::.::::::::::: :.:::::.: XP_006 DGSVDFYRDWATYKQGFGSRLGEFWLGNDNIHALTAQGTSELRVDLVDFEDNYQFAKYRS 110 120 130 140 150 160 230 240 250 260 270 280 pF1KE4 FKVADEAEKYKLVLGAFVGGSAGNSLTGHNNNFFSTKDQDNDVSSSNCAEKFQGAWWYAD ::::::::::.::::::: ::::.::: :::. :::::::::....::: ::::::: . XP_006 FKVADEAEKYNLVLGAFVEGSAGDSLTFHNNQSFSTKDQDNDLNTGNCAVMFQGAWWYKN 170 180 190 200 210 220 290 300 310 320 pF1KE4 CHASNLNGLYLMGPHESYANGINWSAAKGYKYSYKVSEMKVRPA ::.::::: :: : : :.::::::...:::.::::::::::::: XP_006 CHVSNLNGRYLRGTHGSFANGINWKSGKGYNYSYKVSEMKVRPA 230 240 250 260 >>NP_056652 (OMIM: 601624) ficolin-2 isoform b precursor (275 aa) initn: 1410 init1: 1371 opt: 1380 Z-score: 1218.4 bits: 233.5 E(85289): 4e-61 Smith-Waterman score: 1401; 78.7% identity (87.8% similar) in 254 aa overlap (73-326:34-275) 50 60 70 80 90 100 pF1KE4 GSDKLTILRGCPGLPGAPGPKGEAGVIGERGERGLPGAPGKAGPVGPKGDRGEKGMRGEK :::: :: :::::: ::.: :: NP_056 DRAVGVLGAATLLLSFLGMAWALQAADTCPGERGPPGPPGKAGPPGPNGAPGEP------ 10 20 30 40 50 110 120 130 140 150 160 pF1KE4 GDAGQSQSCATGPRNCKDLLDRGYFLSGWHTIYLPDCRPLTVLCDMDTDGGGWTVFQRRM : : ::::.::::::::.:::::::::::::::::::::::::::::::::::. NP_056 ------QPCLTGPRTCKDLLDRGHFLSGWHTIYLPDCRPLTVLCDMDTDGGGWTVFQRRV 60 70 80 90 100 110 170 180 190 200 210 220 pF1KE4 DGSVDFYRDWAAYKQGFGSQLGEFWLGNDNIHALTAQGSSELRVDLVDFEGNHQFAKYKS :::::::::::.:::::::.::::::::::::::::::.::::::::::: :.:::::.: NP_056 DGSVDFYRDWATYKQGFGSRLGEFWLGNDNIHALTAQGTSELRVDLVDFEDNYQFAKYRS 120 130 140 150 160 170 230 240 250 260 270 280 pF1KE4 FKVADEAEKYKLVLGAFVGGSAGNSLTGHNNNFFSTKDQDNDVSSSNCAEKFQGAWWYAD ::::::::::.::::::: ::::.::: :::. :::::::::....::: ::::::: . NP_056 FKVADEAEKYNLVLGAFVEGSAGDSLTFHNNQSFSTKDQDNDLNTGNCAVMFQGAWWYKN 180 190 200 210 220 230 290 300 310 320 pF1KE4 CHASNLNGLYLMGPHESYANGINWSAAKGYKYSYKVSEMKVRPA ::.::::: :: : : :.::::::...:::.::::::::::::: NP_056 CHVSNLNGRYLRGTHGSFANGINWKSGKGYNYSYKVSEMKVRPA 240 250 260 270 >>NP_003656 (OMIM: 604973,613860) ficolin-3 isoform 1 pr (299 aa) initn: 1042 init1: 925 opt: 955 Z-score: 847.6 bits: 165.0 E(85289): 1.8e-40 Smith-Waterman score: 982; 47.0% identity (68.8% similar) in 317 aa overlap (12-324:4-299) 10 20 30 40 50 pF1KE4 MELSGATMARGLAVLLVLFLHIKNLPA----QAADTCPEVKVVGLEGSDKLTILRGCPGL : .: :.: . . :: : .:: . ::.: :...: .::: NP_003 MDLLWILPSLWLLLLGGPACLKTQEHPSCPGPRE--LEAS-KVVLLPSCPGA 10 20 30 40 60 70 80 90 100 110 pF1KE4 PGAPGPKGEAGVIGERGERGLPGAPGKAGPVGPKGDRGEKGMRGEKGDAGQSQSCATGPR ::.:: :: ::: :: :: : : :: : :: . : ::: NP_003 PGSPGEKG---------------APGPQGPPGPPGKMGPKG---EPGDPVNLLRCQEGPR 50 60 70 80 90 120 130 140 150 160 170 pF1KE4 NCKDLLDRGYFLSGWHTIYLPDCRPLTVLCDMDTDGGGWTVFQRRMDGSVDFYRDWAAYK ::..::..: ::::. . ::. : : :.:::::.:::: :::::.::::::.:.:..:. NP_003 NCRELLSQGATLSGWYHLCLPEGRALPVFCDMDTEGGGWLVFQRRQDGSVDFFRSWSSYR 100 110 120 130 140 150 180 190 200 210 220 230 pF1KE4 QGFGSQLGEFWLGNDNIHALTAQGSSELRVDLVDFEGNHQFAKYKSFKVADEAEKYKLVL :::.: .::::::.:.: :: ::. ::::.: ::.::. ::.: .:.. :...:.:.: NP_003 AGFGNQESEFWLGNENLHQLTLQGNWELRVELEDFNGNRTFAHYATFRLLGEVDHYQLAL 160 170 180 190 200 210 240 250 260 270 280 290 pF1KE4 GAFVGGSAGNSLTGHNNNFFSTKDQDNDVSSSNCAEKFQGAWWYADCHASNLNGLYLMGP : : :.::.::. :.. :.: : :.: :.:::: .::::::.:. ::::: : .. NP_003 GKFSEGTAGDSLSLHSGRPFTTYDADHDSSNSNCAVIVHGAWWYASCYRSNLNGRYAVSE 220 230 240 250 260 270 300 310 320 pF1KE4 HESYANGINWSAAKGYKYSYKVSEMKVRPA .. ::.:....: . :. .: .: NP_003 AAAHKYGIDWASGRGVGHPYRRVRMMLR 280 290 >>NP_775628 (OMIM: 604973,613860) ficolin-3 isoform 2 pr (288 aa) initn: 1251 init1: 823 opt: 925 Z-score: 821.7 bits: 160.1 E(85289): 5e-39 Smith-Waterman score: 937; 45.7% identity (67.2% similar) in 317 aa overlap (12-324:4-288) 10 20 30 40 50 pF1KE4 MELSGATMARGLAVLLVLFLHIKNLPA----QAADTCPEVKVVGLEGSDKLTILRGCPGL : .: :.: . . :: : .:: . ::.: :...: .::: NP_775 MDLLWILPSLWLLLLGGPACLKTQEHPSCPGPRE--LEAS-KVVLLPSCPGA 10 20 30 40 60 70 80 90 100 110 pF1KE4 PGAPGPKGEAGVIGERGERGLPGAPGKAGPVGPKGDRGEKGMRGEKGDAGQSQSCATGPR ::.:: :: ::: :: :: : : :: ::: NP_775 PGSPGEKG---------------APGPQGPPGPPGKMGPKG--------------EPGPR 50 60 70 80 120 130 140 150 160 170 pF1KE4 NCKDLLDRGYFLSGWHTIYLPDCRPLTVLCDMDTDGGGWTVFQRRMDGSVDFYRDWAAYK ::..::..: ::::. . ::. : : :.:::::.:::: :::::.::::::.:.:..:. NP_775 NCRELLSQGATLSGWYHLCLPEGRALPVFCDMDTEGGGWLVFQRRQDGSVDFFRSWSSYR 90 100 110 120 130 140 180 190 200 210 220 230 pF1KE4 QGFGSQLGEFWLGNDNIHALTAQGSSELRVDLVDFEGNHQFAKYKSFKVADEAEKYKLVL :::.: .::::::.:.: :: ::. ::::.: ::.::. ::.: .:.. :...:.:.: NP_775 AGFGNQESEFWLGNENLHQLTLQGNWELRVELEDFNGNRTFAHYATFRLLGEVDHYQLAL 150 160 170 180 190 200 240 250 260 270 280 290 pF1KE4 GAFVGGSAGNSLTGHNNNFFSTKDQDNDVSSSNCAEKFQGAWWYADCHASNLNGLYLMGP : : :.::.::. :.. :.: : :.: :.:::: .::::::.:. ::::: : .. NP_775 GKFSEGTAGDSLSLHSGRPFTTYDADHDSSNSNCAVIVHGAWWYASCYRSNLNGRYAVSE 210 220 230 240 250 260 300 310 320 pF1KE4 HESYANGINWSAAKGYKYSYKVSEMKVRPA .. ::.:....: . :. .: .: NP_775 AAAHKYGIDWASGRGVGHPYRRVRMMLR 270 280 >>NP_116232 (OMIM: 613357) fibrinogen C domain-containin (461 aa) initn: 734 init1: 365 opt: 779 Z-score: 692.1 bits: 136.8 E(85289): 8.3e-32 Smith-Waterman score: 779; 47.9% identity (68.2% similar) in 261 aa overlap (74-325:210-456) 50 60 70 80 90 100 pF1KE4 SDKLTILRGCPGLPGAPGPKGEAGVIGERGERGLPGAPGKAGPVGPKGDRGEKGMRGEKG .::: : : . :.: . :: . NP_116 GRLIQLLSESQGHMAHLVNSVSDILDALQRDRGL-GRPRN------KADLQRAPARGTR- 180 190 200 210 220 230 110 120 130 140 150 pF1KE4 DAGQSQSCATG--PRNCKDLLDRGYFLSGWHTIYLPDCRP--LTVLCDMDTDGGGWTVFQ ..:::: ::.: :.: : .: .... : : . : ::: :::::::::: NP_116 ----PRGCATGSRPRDCLDVLLSGQQDDGVYSVF-PTHYPAGFQVYCDMRTDGGGWTVFQ 240 250 260 270 280 160 170 180 190 200 210 pF1KE4 RRMDGSVDFYRDWAAYKQGFGSQLGEFWLGNDNIHALTAQGSSELRVDLVDFEGNHQFAK :: ::::.:.: : ::..::: :: ::: :::::.:.. ::.::: :::.. .:. NP_116 RREDGSVNFFRGWDAYRDGFGRLTGEHWLGLKRIHALTTQAAYELHVDLEDFENGTAYAR 290 300 310 320 330 340 220 230 240 250 260 270 pF1KE4 YKSFKVA-----DEAEKYKLVLGAFVGGSAGNSLTGHNNNFFSTKDQDNDVSSSNCAEKF : :: :. : . : :... . .:.::.:: :.. :.:::.:.: : .::: . NP_116 YGSFGVGLFSVDPEEDGYPLTVADY-SGTAGDSLLKHSGMRFTTKDRDSDHSENNCAAFY 350 360 370 380 390 400 280 290 300 310 320 pF1KE4 QGAWWYADCHASNLNGLYLMGPHESYANGINWSAAKGYKYSYKVSEMKVRPA .::::: .::.::::: :: : : :::.:..::. :..:: : ::::.:: NP_116 RGAWWYRNCHTSNLNGQYLRGAHASYADGVEWSSWTGWQYSLKFSEMKIRPVREDR 410 420 430 440 450 460 >>NP_001138578 (OMIM: 613357) fibrinogen C domain-contai (461 aa) initn: 734 init1: 365 opt: 779 Z-score: 692.1 bits: 136.8 E(85289): 8.3e-32 Smith-Waterman score: 779; 47.9% identity (68.2% similar) in 261 aa overlap (74-325:210-456) 50 60 70 80 90 100 pF1KE4 SDKLTILRGCPGLPGAPGPKGEAGVIGERGERGLPGAPGKAGPVGPKGDRGEKGMRGEKG .::: : : . :.: . :: . NP_001 GRLIQLLSESQGHMAHLVNSVSDILDALQRDRGL-GRPRN------KADLQRAPARGTR- 180 190 200 210 220 230 110 120 130 140 150 pF1KE4 DAGQSQSCATG--PRNCKDLLDRGYFLSGWHTIYLPDCRP--LTVLCDMDTDGGGWTVFQ ..:::: ::.: :.: : .: .... : : . : ::: :::::::::: NP_001 ----PRGCATGSRPRDCLDVLLSGQQDDGVYSVF-PTHYPAGFQVYCDMRTDGGGWTVFQ 240 250 260 270 280 160 170 180 190 200 210 pF1KE4 RRMDGSVDFYRDWAAYKQGFGSQLGEFWLGNDNIHALTAQGSSELRVDLVDFEGNHQFAK :: ::::.:.: : ::..::: :: ::: :::::.:.. ::.::: :::.. .:. NP_001 RREDGSVNFFRGWDAYRDGFGRLTGEHWLGLKRIHALTTQAAYELHVDLEDFENGTAYAR 290 300 310 320 330 340 220 230 240 250 260 270 pF1KE4 YKSFKVA-----DEAEKYKLVLGAFVGGSAGNSLTGHNNNFFSTKDQDNDVSSSNCAEKF : :: :. : . : :... . .:.::.:: :.. :.:::.:.: : .::: . NP_001 YGSFGVGLFSVDPEEDGYPLTVADY-SGTAGDSLLKHSGMRFTTKDRDSDHSENNCAAFY 350 360 370 380 390 400 280 290 300 310 320 pF1KE4 QGAWWYADCHASNLNGLYLMGPHESYANGINWSAAKGYKYSYKVSEMKVRPA .::::: .::.::::: :: : : :::.:..::. :..:: : ::::.:: NP_001 RGAWWYRNCHTSNLNGQYLRGAHASYADGVEWSSWTGWQYSLKFSEMKIRPVREDR 410 420 430 440 450 460 >>NP_002395 (OMIM: 600596) microfibril-associated glycop (255 aa) initn: 696 init1: 357 opt: 728 Z-score: 650.6 bits: 128.3 E(85289): 1.7e-29 Smith-Waterman score: 728; 47.9% identity (70.5% similar) in 234 aa overlap (100-326:24-255) 70 80 90 100 110 120 pF1KE4 GERGERGLPGAPGKAGPVGPKGDRGEKGMRGEKGDAGQSQSCATGPRNCKDLLDRGYFLS : .::: . . : : .: :. .:: . NP_002 MKALLALPLLLLLSTPPCAPQVSGIRGDALE-RFCLQQPLDCDDIYAQGYQSD 10 20 30 40 50 130 140 150 160 170 180 pF1KE4 GWHTIYLPD--CRPLTVLCDMDTDGGGWTVFQRRMDGSVDFYRDWAAYKQGFGSQLGEFW : . :: :. :. :.::: :.:: :::::.:..:::.:.: : :: ::: ::.: NP_002 GVYLIY-PSGPSVPVPVFCDMTTEGGKWTVFQKRFNGSVSFFRGWNDYKLGFGRADGEYW 60 70 80 90 100 110 190 200 210 220 230 240 pF1KE4 LGNDNIHALTAQGSSELRVDLVDFEGNHQFAKYKSFKVADEA-----EKYKLVLGAFVGG :: .:.: :: . . :::::: :::.: .::: .:... .: . : : ...: : NP_002 LGLQNMHLLTLKQKYELRVDLEDFENNTAYAKYADFSISPNAVSAEEDGYTLFVAGFEDG 120 130 140 150 160 170 250 260 270 280 290 300 pF1KE4 SAGNSLTGHNNNFFSTKDQDNDVSSSNCAEKFQGAWWYADCHASNLNGLYLMGPHESYAN .::.::. :... ::: :.:.:. .::: .::.:. .:: .::::.:: : : :::: NP_002 GAGDSLSYHSGQKFSTFDRDQDLFVQNCAALSSGAFWFRSCHFANLNGFYLGGSHLSYAN 180 190 200 210 220 230 310 320 pF1KE4 GINWSAAKGYKYSYKVSEMKVRPA ::::. ::. :: : .:::.: : NP_002 GINWAQWKGFYYSLKRTEMKIRRA 240 250 326 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 17:26:48 2016 done: Mon Nov 7 17:26:49 2016 Total Scan time: 6.720 Total Display time: 0.010 Function used was FASTA [36.3.4 Apr, 2011]