FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3625, 454 aa 1>>>pF1KE3625 454 - 454 aa - 454 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.5388+/-0.00126; mu= 10.7863+/- 0.074 mean_var=110.1228+/-23.792, 0's: 0 Z-trim(103.3): 146 B-trim: 0 in 0/50 Lambda= 0.122218 statistics sampled from 7209 (7367) to 7209 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.586), E-opt: 0.2 (0.226), width: 16 Scan time: 2.550 The best scores are: opt bits E(32554) CCDS43872.1 FBXW2 gene_id:26190|Hs108|chr9 ( 454) 3081 554.9 6e-158 >>CCDS43872.1 FBXW2 gene_id:26190|Hs108|chr9 (454 aa) initn: 3081 init1: 3081 opt: 3081 Z-score: 2949.2 bits: 554.9 E(32554): 6e-158 Smith-Waterman score: 3081; 100.0% identity (100.0% similar) in 454 aa overlap (1-454:1-454) 10 20 30 40 50 60 pF1KE3 MERKDFETWLDNISVTFLSLTDLQKNETLDHLISLSGAVQLRHLSNNLETLLKRDFLKLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 MERKDFETWLDNISVTFLSLTDLQKNETLDHLISLSGAVQLRHLSNNLETLLKRDFLKLL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 PLELSFYLLKWLDPQTLLTCCLVSKQWNKVISACTEVWQTACKNLGWQIDDSVQDALHWK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 PLELSFYLLKWLDPQTLLTCCLVSKQWNKVISACTEVWQTACKNLGWQIDDSVQDALHWK 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 KVYLKAILRMKQLEDHEAFETSSLIGHSARVYALYYKDGLLCTGSDDLSAKLWDVSTGQC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 KVYLKAILRMKQLEDHEAFETSSLIGHSARVYALYYKDGLLCTGSDDLSAKLWDVSTGQC 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 VYGIQTHTCAAVKFDEQKLVTGSFDNTVACWEWSSGARTQHFRGHTGAVFSVDYNDELDI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 VYGIQTHTCAAVKFDEQKLVTGSFDNTVACWEWSSGARTQHFRGHTGAVFSVDYNDELDI 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 LVSGSADFTVKVWALSAGTCLNTLTGHTEWVTKVVLQKCKVKSLLHSPGDYILLSADKYE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 LVSGSADFTVKVWALSAGTCLNTLTGHTEWVTKVVLQKCKVKSLLHSPGDYILLSADKYE 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 IKIWPIGREINCKCLKTLSVSEDRSICLQPRLHFDGKYIVCSSALGLYQWDFASYDILRV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 IKIWPIGREINCKCLKTLSVSEDRSICLQPRLHFDGKYIVCSSALGLYQWDFASYDILRV 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE3 IKTPEIANLALLGFGDIFALLFDNRYLYIMDLRTESLISRWPLPEYRKSKRGSSFLAGEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 IKTPEIANLALLGFGDIFALLFDNRYLYIMDLRTESLISRWPLPEYRKSKRGSSFLAGEA 370 380 390 400 410 420 430 440 450 pF1KE3 SWLNGLDGHNDTGLVFATSMPDHSIHLVLWKEHG :::::::::::::::::::::::::::::::::: CCDS43 SWLNGLDGHNDTGLVFATSMPDHSIHLVLWKEHG 430 440 450 454 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 22:45:57 2016 done: Sun Nov 6 22:45:58 2016 Total Scan time: 2.550 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]