FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1542, 196 aa 1>>>pF1KE1542 196 - 196 aa - 196 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.0143+/-0.000907; mu= 9.5131+/- 0.054 mean_var=71.5261+/-14.579, 0's: 0 Z-trim(105.3): 53 B-trim: 3 in 1/49 Lambda= 0.151650 statistics sampled from 8313 (8366) to 8313 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.646), E-opt: 0.2 (0.257), width: 16 Scan time: 1.950 The best scores are: opt bits E(32554) CCDS1375.2 RGS1 gene_id:5996|Hs108|chr1 ( 209) 1284 289.9 7.1e-79 CCDS41448.1 RGS21 gene_id:431704|Hs108|chr1 ( 152) 519 122.5 1.3e-28 CCDS6798.1 RGS3 gene_id:5998|Hs108|chr9 ( 519) 494 117.2 1.7e-26 CCDS6797.1 RGS3 gene_id:5998|Hs108|chr9 ( 917) 494 117.3 2.9e-26 CCDS43869.1 RGS3 gene_id:5998|Hs108|chr9 (1198) 494 117.3 3.7e-26 CCDS65111.1 RGS3 gene_id:5998|Hs108|chr9 ( 591) 484 115.0 8.9e-26 CCDS41443.1 RGS8 gene_id:85397|Hs108|chr1 ( 180) 470 111.8 2.5e-25 CCDS1349.1 RGS8 gene_id:85397|Hs108|chr1 ( 198) 470 111.8 2.7e-25 CCDS35114.1 RGS3 gene_id:5998|Hs108|chr9 ( 311) 472 112.3 3.1e-25 CCDS1376.1 RGS13 gene_id:6003|Hs108|chr1 ( 159) 465 110.7 4.8e-25 CCDS1374.1 RGS18 gene_id:64407|Hs108|chr1 ( 235) 456 108.8 2.7e-24 CCDS44272.1 RGS4 gene_id:5999|Hs108|chr1 ( 187) 454 108.3 2.9e-24 CCDS1243.1 RGS4 gene_id:5999|Hs108|chr1 ( 205) 454 108.3 3.2e-24 CCDS1244.1 RGS5 gene_id:8490|Hs108|chr1 ( 181) 453 108.1 3.3e-24 CCDS1377.1 RGS2 gene_id:5997|Hs108|chr1 ( 211) 452 107.9 4.5e-24 CCDS44270.1 RGS4 gene_id:5999|Hs108|chr1 ( 302) 454 108.4 4.6e-24 CCDS58041.1 RGS5 gene_id:8490|Hs108|chr1 ( 185) 435 104.2 5.2e-23 CCDS1348.1 RGS16 gene_id:6004|Hs108|chr1 ( 202) 424 101.8 3e-22 CCDS6156.1 RGS20 gene_id:8601|Hs108|chr8 ( 241) 385 93.3 1.3e-19 CCDS69482.1 RGS20 gene_id:8601|Hs108|chr8 ( 273) 385 93.3 1.5e-19 CCDS13555.1 RGS19 gene_id:10287|Hs108|chr20 ( 217) 382 92.6 1.9e-19 CCDS6155.1 RGS20 gene_id:8601|Hs108|chr8 ( 388) 385 93.3 2e-19 CCDS5244.1 RGS17 gene_id:26575|Hs108|chr6 ( 210) 380 92.1 2.5e-19 CCDS41572.1 RGS10 gene_id:6001|Hs108|chr10 ( 167) 364 88.6 2.3e-18 CCDS31294.1 RGS10 gene_id:6001|Hs108|chr10 ( 181) 364 88.6 2.4e-18 CCDS45764.1 RGS9 gene_id:8787|Hs108|chr17 ( 671) 339 83.3 3.5e-16 CCDS42373.1 RGS9 gene_id:8787|Hs108|chr17 ( 674) 339 83.3 3.6e-16 CCDS60457.1 RGS7 gene_id:6000|Hs108|chr1 ( 424) 334 82.2 5e-16 CCDS10403.1 RGS11 gene_id:8786|Hs108|chr16 ( 446) 334 82.2 5.2e-16 CCDS66884.1 RGS11 gene_id:8786|Hs108|chr16 ( 456) 334 82.2 5.3e-16 CCDS42088.1 RGS11 gene_id:8786|Hs108|chr16 ( 467) 334 82.2 5.4e-16 CCDS60458.1 RGS7 gene_id:6000|Hs108|chr1 ( 469) 334 82.2 5.5e-16 CCDS60459.1 RGS7 gene_id:6000|Hs108|chr1 ( 477) 334 82.2 5.5e-16 CCDS31071.1 RGS7 gene_id:6000|Hs108|chr1 ( 487) 334 82.2 5.7e-16 CCDS73655.1 RGS6 gene_id:9628|Hs108|chr14 ( 437) 319 78.9 5e-15 CCDS9808.1 RGS6 gene_id:9628|Hs108|chr14 ( 472) 319 78.9 5.3e-15 CCDS55924.1 RGS6 gene_id:9628|Hs108|chr14 ( 490) 319 78.9 5.5e-15 CCDS3368.1 RGS12 gene_id:6002|Hs108|chr4 ( 799) 317 78.5 1.2e-14 CCDS3367.1 RGS12 gene_id:6002|Hs108|chr4 (1376) 308 76.6 7.5e-14 CCDS3366.1 RGS12 gene_id:6002|Hs108|chr4 (1447) 308 76.6 7.9e-14 CCDS43405.1 RGS14 gene_id:10636|Hs108|chr5 ( 566) 280 70.4 2.3e-12 >>CCDS1375.2 RGS1 gene_id:5996|Hs108|chr1 (209 aa) initn: 1284 init1: 1284 opt: 1284 Z-score: 1529.6 bits: 289.9 E(32554): 7.1e-79 Smith-Waterman score: 1284; 100.0% identity (100.0% similar) in 196 aa overlap (1-196:14-209) 10 20 30 40 pF1KE1 MPGMFFSANPKELKGTTHSLLDDKMQKRRPKTFGMDMKAYLRSMIPH ::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 MRAAAISTPKLDKMPGMFFSANPKELKGTTHSLLDDKMQKRRPKTFGMDMKAYLRSMIPH 10 20 30 40 50 60 50 60 70 80 90 100 pF1KE1 LESGMKSSKSKDVLSAAEVMQWSQSLEKLLANQTGQNVFGSFLKSEFSEENIEFWLACED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 LESGMKSSKSKDVLSAAEVMQWSQSLEKLLANQTGQNVFGSFLKSEFSEENIEFWLACED 70 80 90 100 110 120 110 120 130 140 150 160 pF1KE1 YKKTESDLLPCKAEEIYKAFVHSDAAKQINIDFRTRESTAKKIKAPTPTCFDEAQKVIYT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 YKKTESDLLPCKAEEIYKAFVHSDAAKQINIDFRTRESTAKKIKAPTPTCFDEAQKVIYT 130 140 150 160 170 180 170 180 190 pF1KE1 LMEKDSYPRFLKSDIYLNLLNDLQANSLK ::::::::::::::::::::::::::::: CCDS13 LMEKDSYPRFLKSDIYLNLLNDLQANSLK 190 200 >>CCDS41448.1 RGS21 gene_id:431704|Hs108|chr1 (152 aa) initn: 534 init1: 288 opt: 519 Z-score: 627.3 bits: 122.5 E(32554): 1.3e-28 Smith-Waterman score: 519; 59.0% identity (81.3% similar) in 134 aa overlap (64-196:13-146) 40 50 60 70 80 90 pF1KE1 GMDMKAYLRSMIPHLESGMKSSKSKDVLSAAEVMQWSQSLEKLLANQTGQNVFGSFLKSE ::.: ::.... :::::.: ..: ::::: CCDS41 MPVKCCFYRSPTAETMTWSENMDTLLANQAGLDAFRIFLKSE 10 20 30 40 100 110 120 130 140 150 pF1KE1 FSEENIEFWLACEDYKKTES-DLLPCKAEEIYKAFVHSDAAKQINIDFRTRESTAKKIKA :::::.::::::::.:::.. : . ::. ::. :...:: :.::::: ::. .:.: CCDS41 FSEENVEFWLACEDFKKTKNADKIASKAKMIYSEFIEADAPKEINIDFGTRDLISKNIAE 50 60 70 80 90 100 160 170 180 190 pF1KE1 PTPTCFDEAQKVIYTLMEKDSYPRFLKSDIYLNLLNDLQANSLK :: :::::::.:: :: :::.::::::.:: .:.:. :. . : CCDS41 PTLKCFDEAQKLIYCLMAKDSFPRFLKSEIYKKLVNSQQVPNHKKWLPFL 110 120 130 140 150 >>CCDS6798.1 RGS3 gene_id:5998|Hs108|chr9 (519 aa) initn: 473 init1: 244 opt: 494 Z-score: 589.0 bits: 117.2 E(32554): 1.7e-26 Smith-Waterman score: 494; 42.5% identity (70.5% similar) in 193 aa overlap (4-188:319-511) 10 20 30 pF1KE1 MPGMFFSANPKELKGTTHSLLDDKMQKRRPKTF .::... : . : . :. .::. :.. CCDS67 EGAASTWGMPSPSTLKKELGRNGGSMHHLSLFFTGHRKMSGADTVGDDDEASRKRKSKNL 290 300 310 320 330 340 40 50 60 70 80 pF1KE1 GMDMKAYL-----RSMIPHLESGMKSSKSKDVL--SAAEVMQWSQSLEKLLANQTGQNVF . ::: : :. : . :..: . .. :...:..::::::... : :: CCDS67 AKDMKNKLGIFRRRNESPGAPPAGKADKMMKSFKPTSEEALKWGESLEKLLVHKYGLAVF 350 360 370 380 390 400 90 100 110 120 130 140 pF1KE1 GSFLKSEFSEENIEFWLACEDYKKTESDL-LPCKAEEIYKAFVHSDAAKQINIDFRTRES .::..::::::.::::::::.::..:. . ::..:. .. .: :..:.: ::: CCDS67 QAFLRTEFSEENLEFWLACEDFKKVKSQSKMASKAKKIFAEYIAIQACKEVNLDSYTREH 410 420 430 440 450 460 150 160 170 180 190 pF1KE1 TAKKIKAPTPTCFDEAQKVIYTLMEKDSYPRFLKSDIYLNLLNDLQANSLK : .... : ::: ::: :. :::::::::::.::.::.:.: CCDS67 TKDNLQSVTRGCFDLAQKRIFGLMEKDSYPRFLRSDLYLDLINQKKMSPPL 470 480 490 500 510 >>CCDS6797.1 RGS3 gene_id:5998|Hs108|chr9 (917 aa) initn: 473 init1: 244 opt: 494 Z-score: 584.9 bits: 117.3 E(32554): 2.9e-26 Smith-Waterman score: 494; 42.5% identity (70.5% similar) in 193 aa overlap (4-188:717-909) 10 20 30 pF1KE1 MPGMFFSANPKELKGTTHSLLDDKMQKRRPKTF .::... : . : . :. .::. :.. CCDS67 EGAASTWGMPSPSTLKKELGRNGGSMHHLSLFFTGHRKMSGADTVGDDDEASRKRKSKNL 690 700 710 720 730 740 40 50 60 70 80 pF1KE1 GMDMKAYL-----RSMIPHLESGMKSSKSKDVL--SAAEVMQWSQSLEKLLANQTGQNVF . ::: : :. : . :..: . .. :...:..::::::... : :: CCDS67 AKDMKNKLGIFRRRNESPGAPPAGKADKMMKSFKPTSEEALKWGESLEKLLVHKYGLAVF 750 760 770 780 790 800 90 100 110 120 130 140 pF1KE1 GSFLKSEFSEENIEFWLACEDYKKTESDL-LPCKAEEIYKAFVHSDAAKQINIDFRTRES .::..::::::.::::::::.::..:. . ::..:. .. .: :..:.: ::: CCDS67 QAFLRTEFSEENLEFWLACEDFKKVKSQSKMASKAKKIFAEYIAIQACKEVNLDSYTREH 810 820 830 840 850 860 150 160 170 180 190 pF1KE1 TAKKIKAPTPTCFDEAQKVIYTLMEKDSYPRFLKSDIYLNLLNDLQANSLK : .... : ::: ::: :. :::::::::::.::.::.:.: CCDS67 TKDNLQSVTRGCFDLAQKRIFGLMEKDSYPRFLRSDLYLDLINQKKMSPPL 870 880 890 900 910 >>CCDS43869.1 RGS3 gene_id:5998|Hs108|chr9 (1198 aa) initn: 473 init1: 244 opt: 494 Z-score: 583.0 bits: 117.3 E(32554): 3.7e-26 Smith-Waterman score: 494; 42.5% identity (70.5% similar) in 193 aa overlap (4-188:998-1190) 10 20 30 pF1KE1 MPGMFFSANPKELKGTTHSLLDDKMQKRRPKTF .::... : . : . :. .::. :.. CCDS43 EGAASTWGMPSPSTLKKELGRNGGSMHHLSLFFTGHRKMSGADTVGDDDEASRKRKSKNL 970 980 990 1000 1010 1020 40 50 60 70 80 pF1KE1 GMDMKAYL-----RSMIPHLESGMKSSKSKDVL--SAAEVMQWSQSLEKLLANQTGQNVF . ::: : :. : . :..: . .. :...:..::::::... : :: CCDS43 AKDMKNKLGIFRRRNESPGAPPAGKADKMMKSFKPTSEEALKWGESLEKLLVHKYGLAVF 1030 1040 1050 1060 1070 1080 90 100 110 120 130 140 pF1KE1 GSFLKSEFSEENIEFWLACEDYKKTESDL-LPCKAEEIYKAFVHSDAAKQINIDFRTRES .::..::::::.::::::::.::..:. . ::..:. .. .: :..:.: ::: CCDS43 QAFLRTEFSEENLEFWLACEDFKKVKSQSKMASKAKKIFAEYIAIQACKEVNLDSYTREH 1090 1100 1110 1120 1130 1140 150 160 170 180 190 pF1KE1 TAKKIKAPTPTCFDEAQKVIYTLMEKDSYPRFLKSDIYLNLLNDLQANSLK : .... : ::: ::: :. :::::::::::.::.::.:.: CCDS43 TKDNLQSVTRGCFDLAQKRIFGLMEKDSYPRFLRSDLYLDLINQKKMSPPL 1150 1160 1170 1180 1190 >>CCDS65111.1 RGS3 gene_id:5998|Hs108|chr9 (591 aa) initn: 463 init1: 244 opt: 484 Z-score: 576.2 bits: 115.0 E(32554): 8.9e-26 Smith-Waterman score: 485; 41.8% identity (70.1% similar) in 194 aa overlap (6-188:390-583) 10 20 30 pF1KE1 MPGMFFSANPKELKGTTHSLL---DDKMQKRRPKT ..:.: . : . . . :. .::. :. CCDS65 ECLFTLEAHSQEQKKRVCWCLSENIAKQQQLAASPPDSKMSGADTVGDDDEASRKRKSKN 360 370 380 390 400 410 40 50 60 70 80 pF1KE1 FGMDMKAYL-----RSMIPHLESGMKSSKSKDVL--SAAEVMQWSQSLEKLLANQTGQNV .. ::: : :. : . :..: . .. :...:..::::::... : : CCDS65 LAKDMKNKLGIFRRRNESPGAPPAGKADKMMKSFKPTSEEALKWGESLEKLLVHKYGLAV 420 430 440 450 460 470 90 100 110 120 130 140 pF1KE1 FGSFLKSEFSEENIEFWLACEDYKKTESDL-LPCKAEEIYKAFVHSDAAKQINIDFRTRE : .::..::::::.::::::::.::..:. . ::..:. .. .: :..:.: ::: CCDS65 FQAFLRTEFSEENLEFWLACEDFKKVKSQSKMASKAKKIFAEYIAIQACKEVNLDSYTRE 480 490 500 510 520 530 150 160 170 180 190 pF1KE1 STAKKIKAPTPTCFDEAQKVIYTLMEKDSYPRFLKSDIYLNLLNDLQANSLK : .... : ::: ::: :. :::::::::::.::.::.:.: CCDS65 HTKDNLQSVTRGCFDLAQKRIFGLMEKDSYPRFLRSDLYLDLINQKKMSPPL 540 550 560 570 580 590 >>CCDS41443.1 RGS8 gene_id:85397|Hs108|chr1 (180 aa) initn: 467 init1: 276 opt: 470 Z-score: 568.1 bits: 111.8 E(32554): 2.5e-25 Smith-Waterman score: 470; 50.0% identity (80.7% similar) in 140 aa overlap (53-191:37-176) 30 40 50 60 70 80 pF1KE1 DKMQKRRPKTFGMDMKAYLRSMIPHLESGMKSSKSKDVLSAAEVMQWSQSLEKLLANQTG : ... ::. :. .:..:.. ::... : CCDS41 PRRNKGMRTRLGCLSHKSDSCSDFTAILPDKPNRALKRLSTEEATRWADSFDVLLSHKYG 10 20 30 40 50 60 90 100 110 120 130 140 pF1KE1 QNVFGSFLKSEFSEENIEFWLACEDYKKTESDL-LPCKAEEIYKAFVHSDAAKQINIDFR .: .:::.::::::.:::::::..:::.: : ::..:.. :: .: ...::::. CCDS41 VAAFRAFLKTEFSEENLEFWLACEEFKKTRSTAKLVSKAHRIFEEFVDVQAPREVNIDFQ 70 80 90 100 110 120 150 160 170 180 190 pF1KE1 TRESTAKKIKAPTPTCFDEAQKVIYTLMEKDSYPRFLKSDIYLNLLNDLQANSLK :::.: :... :. ::::.:: ...:::::::::::.: .::.::.. : CCDS41 TREATRKNLQEPSLTCFDQAQGKVHSLMEKDSYPRFLRSKMYLDLLSQSQRRLS 130 140 150 160 170 180 >>CCDS1349.1 RGS8 gene_id:85397|Hs108|chr1 (198 aa) initn: 467 init1: 276 opt: 470 Z-score: 567.5 bits: 111.8 E(32554): 2.7e-25 Smith-Waterman score: 470; 50.0% identity (80.7% similar) in 140 aa overlap (53-191:55-194) 30 40 50 60 70 80 pF1KE1 DKMQKRRPKTFGMDMKAYLRSMIPHLESGMKSSKSKDVLSAAEVMQWSQSLEKLLANQTG : ... ::. :. .:..:.. ::... : CCDS13 QRQNKGMRTRLGCLSHKSDSCSDFTAILPDKPNRALKRLSTEEATRWADSFDVLLSHKYG 30 40 50 60 70 80 90 100 110 120 130 140 pF1KE1 QNVFGSFLKSEFSEENIEFWLACEDYKKTESDL-LPCKAEEIYKAFVHSDAAKQINIDFR .: .:::.::::::.:::::::..:::.: : ::..:.. :: .: ...::::. CCDS13 VAAFRAFLKTEFSEENLEFWLACEEFKKTRSTAKLVSKAHRIFEEFVDVQAPREVNIDFQ 90 100 110 120 130 140 150 160 170 180 190 pF1KE1 TRESTAKKIKAPTPTCFDEAQKVIYTLMEKDSYPRFLKSDIYLNLLNDLQANSLK :::.: :... :. ::::.:: ...:::::::::::.: .::.::.. : CCDS13 TREATRKNLQEPSLTCFDQAQGKVHSLMEKDSYPRFLRSKMYLDLLSQSQRRLS 150 160 170 180 190 >>CCDS35114.1 RGS3 gene_id:5998|Hs108|chr9 (311 aa) initn: 426 init1: 244 opt: 472 Z-score: 566.6 bits: 112.3 E(32554): 3.1e-25 Smith-Waterman score: 472; 41.7% identity (68.4% similar) in 187 aa overlap (10-188:117-303) 10 20 30 pF1KE1 MPGMFFSANPKELKGTTHSLLDDKMQKRRPKTFGMDMKA : :. . . ..:.:. . ::: CCDS35 VAARCPGRGVGDRSQSGASYRPICGPKVGGPTEMLRGMYLTRNGNLQRRHTMKEAKDMKN 90 100 110 120 130 140 40 50 60 70 80 90 pF1KE1 YL-----RSMIPHLESGMKSSKSKDVL--SAAEVMQWSQSLEKLLANQTGQNVFGSFLKS : :. : . :..: . .. :...:..::::::... : :: .::.. CCDS35 KLGIFRRRNESPGAPPAGKADKMMKSFKPTSEEALKWGESLEKLLVHKYGLAVFQAFLRT 150 160 170 180 190 200 100 110 120 130 140 150 pF1KE1 EFSEENIEFWLACEDYKKTESDL-LPCKAEEIYKAFVHSDAAKQINIDFRTRESTAKKIK ::::::.::::::::.::..:. . ::..:. .. .: :..:.: ::: : ... CCDS35 EFSEENLEFWLACEDFKKVKSQSKMASKAKKIFAEYIAIQACKEVNLDSYTREHTKDNLQ 210 220 230 240 250 260 160 170 180 190 pF1KE1 APTPTCFDEAQKVIYTLMEKDSYPRFLKSDIYLNLLNDLQANSLK . : ::: ::: :. :::::::::::.::.::.:.: CCDS35 SVTRGCFDLAQKRIFGLMEKDSYPRFLRSDLYLDLINQKKMSPPL 270 280 290 300 310 >>CCDS1376.1 RGS13 gene_id:6003|Hs108|chr1 (159 aa) initn: 454 init1: 268 opt: 465 Z-score: 563.1 bits: 110.7 E(32554): 4.8e-25 Smith-Waterman score: 465; 46.2% identity (77.6% similar) in 143 aa overlap (53-194:15-157) 30 40 50 60 70 80 pF1KE1 DKMQKRRPKTFGMDMKAYLRSMIPHLESGMKSSKSKDVLSAAEVMQWSQSLEKLLANQTG .:.. . :. ::.::.::.:.:.:.. : CCDS13 MSRRNCWICKMCRDESKRPPSNLTLEEVLQWAQSFENLMATKYG 10 20 30 40 90 100 110 120 130 140 pF1KE1 QNVFGSFLKSEFSEENIEFWLACEDYKKTESDLLP-CKAEEIYKAFVHSDAAKQINIDFR :....:: : :.:::.::.::: ::: : .:...:: ... .. ..:::: CCDS13 PVVYAAYLKMEHSDENIQFWMACETYKKIASRWSRISRAKKLYKIYIQPQSPREINIDSS 50 60 70 80 90 100 150 160 170 180 190 pF1KE1 TRESTAKKIKAPTPTCFDEAQKVIYTLMEKDSYPRFLKSDIYLNLLNDLQANSLK :::. ..:. :: :::.::::..: ::.:::::::::..: .::. .:.:. CCDS13 TRETIIRNIQEPTETCFEEAQKIVYMHMERDSYPRFLKSEMYQKLLKTMQSNNSF 110 120 130 140 150 196 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 22:54:13 2016 done: Sun Nov 6 22:54:13 2016 Total Scan time: 1.950 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]