FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE9277, 204 aa 1>>>pF1KE9277 204 - 204 aa - 204 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.6838+/-0.000362; mu= 16.3287+/- 0.022 mean_var=51.8317+/-10.345, 0's: 0 Z-trim(113.5): 13 B-trim: 471 in 2/52 Lambda= 0.178146 statistics sampled from 22845 (22856) to 22845 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.655), E-opt: 0.2 (0.268), width: 16 Scan time: 4.170 The best scores are: opt bits E(85289) NP_068595 (OMIM: 609854) phosphopantothenoylcystei ( 204) 1374 360.6 9.9e-100 XP_016877954 (OMIM: 609854) PREDICTED: phosphopant ( 211) 1206 317.4 1e-86 NP_001288031 (OMIM: 609854) phosphopantothenoylcys ( 172) 874 232.1 4.1e-61 XP_016877951 (OMIM: 609854) PREDICTED: phosphopant ( 154) 707 189.1 3.1e-48 XP_016877950 (OMIM: 609854) PREDICTED: phosphopant ( 179) 706 188.9 4.3e-48 NP_001288030 (OMIM: 609854) phosphopantothenoylcys ( 161) 587 158.3 6.3e-39 NP_001288032 (OMIM: 609854) phosphopantothenoylcys ( 129) 585 157.7 7.5e-39 NP_001288033 (OMIM: 609854) phosphopantothenoylcys ( 81) 561 151.4 3.6e-37 NP_001288034 (OMIM: 609854) phosphopantothenoylcys ( 81) 561 151.4 3.6e-37 XP_016877953 (OMIM: 609854) PREDICTED: phosphopant ( 136) 417 114.6 7.8e-26 XP_016877952 (OMIM: 609854) PREDICTED: phosphopant ( 141) 416 114.3 9.5e-26 >>NP_068595 (OMIM: 609854) phosphopantothenoylcysteine d (204 aa) initn: 1374 init1: 1374 opt: 1374 Z-score: 1911.5 bits: 360.6 E(85289): 9.9e-100 Smith-Waterman score: 1374; 99.5% identity (100.0% similar) in 204 aa overlap (1-204:1-204) 10 20 30 40 50 60 pF1KE9 MEPKASCPAAAPLMERKFHVLVGVTGSVAALKLPLLVSKLLDIPGLEVAVVTTERAKHFY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_068 MEPKASCPAAAPLMERKFHVLVGVTGSVAALKLPLLVSKLLDIPGLEVAVVTTERAKHFY 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE9 SPQDIPVTLYSDADEWEMWKSRSDPVLHIDLRRWADLLLVAPLDANTLGKVASGICDNLL :::::::::::::::::.:::::::::::::::::::::::::::::::::::::::::: NP_068 SPQDIPVTLYSDADEWEIWKSRSDPVLHIDLRRWADLLLVAPLDANTLGKVASGICDNLL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE9 TCVMRAWDRSKPLLFCPAMNTAMWEHPITAQQVDQLKAFGYVEIPCVAKKLVCGDEGLGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_068 TCVMRAWDRSKPLLFCPAMNTAMWEHPITAQQVDQLKAFGYVEIPCVAKKLVCGDEGLGA 130 140 150 160 170 180 190 200 pF1KE9 MAEVGTIVDKVKEVLFQHSGFQQS :::::::::::::::::::::::: NP_068 MAEVGTIVDKVKEVLFQHSGFQQS 190 200 >>XP_016877954 (OMIM: 609854) PREDICTED: phosphopantothe (211 aa) initn: 1206 init1: 1206 opt: 1206 Z-score: 1677.9 bits: 317.4 E(85289): 1e-86 Smith-Waterman score: 1206; 97.8% identity (98.9% similar) in 181 aa overlap (1-181:1-181) 10 20 30 40 50 60 pF1KE9 MEPKASCPAAAPLMERKFHVLVGVTGSVAALKLPLLVSKLLDIPGLEVAVVTTERAKHFY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MEPKASCPAAAPLMERKFHVLVGVTGSVAALKLPLLVSKLLDIPGLEVAVVTTERAKHFY 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE9 SPQDIPVTLYSDADEWEMWKSRSDPVLHIDLRRWADLLLVAPLDANTLGKVASGICDNLL :::::::::::::::::.:::::::::::::::::::::::::::::::::::::::::: XP_016 SPQDIPVTLYSDADEWEIWKSRSDPVLHIDLRRWADLLLVAPLDANTLGKVASGICDNLL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE9 TCVMRAWDRSKPLLFCPAMNTAMWEHPITAQQVDQLKAFGYVEIPCVAKKLVCGDEGLGA ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: : XP_016 TCVMRAWDRSKPLLFCPAMNTAMWEHPITAQQVDQLKAFGYVEIPCVAKKLVCGDEGWTA 130 140 150 160 170 180 190 200 pF1KE9 MAEVGTIVDKVKEVLFQHSGFQQS . XP_016 VVRSWLTYSLDFPGLRCSSHLSHQRSSQDHR 190 200 210 >>NP_001288031 (OMIM: 609854) phosphopantothenoylcystein (172 aa) initn: 872 init1: 872 opt: 874 Z-score: 1218.1 bits: 232.1 E(85289): 4.1e-61 Smith-Waterman score: 1088; 83.8% identity (84.3% similar) in 204 aa overlap (1-204:1-172) 10 20 30 40 50 60 pF1KE9 MEPKASCPAAAPLMERKFHVLVGVTGSVAALKLPLLVSKLLDIPGLEVAVVTTERAKHFY :::::::::::::::::::::::::::::::::::::::::::::. NP_001 MEPKASCPAAAPLMERKFHVLVGVTGSVAALKLPLLVSKLLDIPGI-------------- 10 20 30 40 70 80 90 100 110 120 pF1KE9 SPQDIPVTLYSDADEWEMWKSRSDPVLHIDLRRWADLLLVAPLDANTLGKVASGICDNLL :::::::::::::::::::::::::::::::::::::::::: NP_001 ------------------WKSRSDPVLHIDLRRWADLLLVAPLDANTLGKVASGICDNLL 50 60 70 80 130 140 150 160 170 180 pF1KE9 TCVMRAWDRSKPLLFCPAMNTAMWEHPITAQQVDQLKAFGYVEIPCVAKKLVCGDEGLGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 TCVMRAWDRSKPLLFCPAMNTAMWEHPITAQQVDQLKAFGYVEIPCVAKKLVCGDEGLGA 90 100 110 120 130 140 190 200 pF1KE9 MAEVGTIVDKVKEVLFQHSGFQQS :::::::::::::::::::::::: NP_001 MAEVGTIVDKVKEVLFQHSGFQQS 150 160 170 >>XP_016877951 (OMIM: 609854) PREDICTED: phosphopantothe (154 aa) initn: 716 init1: 702 opt: 707 Z-score: 986.8 bits: 189.1 E(85289): 3.1e-48 Smith-Waterman score: 707; 93.5% identity (96.3% similar) in 108 aa overlap (76-181:17-124) 50 60 70 80 90 100 pF1KE9 LEVAVVTTERAKHFYSPQDIPVTLYSDADEW--EMWKSRSDPVLHIDLRRWADLLLVAPL : ..::::::::::::::::::::::::: XP_016 MASARQLSCRRERRLAWAGQIWKSRSDPVLHIDLRRWADLLLVAPL 10 20 30 40 110 120 130 140 150 160 pF1KE9 DANTLGKVASGICDNLLTCVMRAWDRSKPLLFCPAMNTAMWEHPITAQQVDQLKAFGYVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 DANTLGKVASGICDNLLTCVMRAWDRSKPLLFCPAMNTAMWEHPITAQQVDQLKAFGYVE 50 60 70 80 90 100 170 180 190 200 pF1KE9 IPCVAKKLVCGDEGLGAMAEVGTIVDKVKEVLFQHSGFQQS :::::::::::::: :. XP_016 IPCVAKKLVCGDEGWTAVVRSWLTYSLDFPGLRCSSHLSHQRSSQDHR 110 120 130 140 150 >>XP_016877950 (OMIM: 609854) PREDICTED: phosphopantothe (179 aa) initn: 980 init1: 702 opt: 706 Z-score: 984.5 bits: 188.9 E(85289): 4.3e-48 Smith-Waterman score: 920; 80.1% identity (81.2% similar) in 181 aa overlap (1-181:1-149) 10 20 30 40 50 60 pF1KE9 MEPKASCPAAAPLMERKFHVLVGVTGSVAALKLPLLVSKLLDIPGLEVAVVTTERAKHFY :::::::::::::::::::::::::::::::::::::::::::::. XP_016 MEPKASCPAAAPLMERKFHVLVGVTGSVAALKLPLLVSKLLDIPGI-------------- 10 20 30 40 70 80 90 100 110 120 pF1KE9 SPQDIPVTLYSDADEWEMWKSRSDPVLHIDLRRWADLLLVAPLDANTLGKVASGICDNLL :::::::::::::::::::::::::::::::::::::::::: XP_016 ------------------WKSRSDPVLHIDLRRWADLLLVAPLDANTLGKVASGICDNLL 50 60 70 80 130 140 150 160 170 180 pF1KE9 TCVMRAWDRSKPLLFCPAMNTAMWEHPITAQQVDQLKAFGYVEIPCVAKKLVCGDEGLGA ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: : XP_016 TCVMRAWDRSKPLLFCPAMNTAMWEHPITAQQVDQLKAFGYVEIPCVAKKLVCGDEGWTA 90 100 110 120 130 140 190 200 pF1KE9 MAEVGTIVDKVKEVLFQHSGFQQS . XP_016 VVRSWLTYSLDFPGLRCSSHLSHQRSSQDHR 150 160 170 >>NP_001288030 (OMIM: 609854) phosphopantothenoylcystein (161 aa) initn: 1072 init1: 584 opt: 587 Z-score: 819.9 bits: 158.3 E(85289): 6.3e-39 Smith-Waterman score: 990; 78.9% identity (78.9% similar) in 204 aa overlap (1-204:1-161) 10 20 30 40 50 60 pF1KE9 MEPKASCPAAAPLMERKFHVLVGVTGSVAALKLPLLVSKLLDIPGLEVAVVTTERAKHFY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MEPKASCPAAAPLMERKFHVLVGVTGSVAALKLPLLVSKLLDIPGLEVAVVTTERAKHFY 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE9 SPQDIPVTLYSDADEWEMWKSRSDPVLHIDLRRWADLLLVAPLDANTLGKVASGICDNLL ::::::::::::::::: NP_001 SPQDIPVTLYSDADEWE------------------------------------------- 70 130 140 150 160 170 180 pF1KE9 TCVMRAWDRSKPLLFCPAMNTAMWEHPITAQQVDQLKAFGYVEIPCVAKKLVCGDEGLGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 TCVMRAWDRSKPLLFCPAMNTAMWEHPITAQQVDQLKAFGYVEIPCVAKKLVCGDEGLGA 80 90 100 110 120 130 190 200 pF1KE9 MAEVGTIVDKVKEVLFQHSGFQQS :::::::::::::::::::::::: NP_001 MAEVGTIVDKVKEVLFQHSGFQQS 140 150 160 >>NP_001288032 (OMIM: 609854) phosphopantothenoylcystein (129 aa) initn: 584 init1: 584 opt: 585 Z-score: 818.5 bits: 157.7 E(85289): 7.5e-39 Smith-Waterman score: 714; 63.2% identity (63.2% similar) in 204 aa overlap (1-204:1-129) 10 20 30 40 50 60 pF1KE9 MEPKASCPAAAPLMERKFHVLVGVTGSVAALKLPLLVSKLLDIPGLEVAVVTTERAKHFY ::::::::::::::::::::::::::::::::::::::::::::: NP_001 MEPKASCPAAAPLMERKFHVLVGVTGSVAALKLPLLVSKLLDIPG--------------- 10 20 30 40 70 80 90 100 110 120 pF1KE9 SPQDIPVTLYSDADEWEMWKSRSDPVLHIDLRRWADLLLVAPLDANTLGKVASGICDNLL NP_001 ------------------------------------------------------------ 130 140 150 160 170 180 pF1KE9 TCVMRAWDRSKPLLFCPAMNTAMWEHPITAQQVDQLKAFGYVEIPCVAKKLVCGDEGLGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 TCVMRAWDRSKPLLFCPAMNTAMWEHPITAQQVDQLKAFGYVEIPCVAKKLVCGDEGLGA 50 60 70 80 90 100 190 200 pF1KE9 MAEVGTIVDKVKEVLFQHSGFQQS :::::::::::::::::::::::: NP_001 MAEVGTIVDKVKEVLFQHSGFQQS 110 120 >>NP_001288033 (OMIM: 609854) phosphopantothenoylcystein (81 aa) initn: 561 init1: 561 opt: 561 Z-score: 788.2 bits: 151.4 E(85289): 3.6e-37 Smith-Waterman score: 561; 100.0% identity (100.0% similar) in 81 aa overlap (124-204:1-81) 100 110 120 130 140 150 pF1KE9 WADLLLVAPLDANTLGKVASGICDNLLTCVMRAWDRSKPLLFCPAMNTAMWEHPITAQQV :::::::::::::::::::::::::::::: NP_001 MRAWDRSKPLLFCPAMNTAMWEHPITAQQV 10 20 30 160 170 180 190 200 pF1KE9 DQLKAFGYVEIPCVAKKLVCGDEGLGAMAEVGTIVDKVKEVLFQHSGFQQS ::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 DQLKAFGYVEIPCVAKKLVCGDEGLGAMAEVGTIVDKVKEVLFQHSGFQQS 40 50 60 70 80 >>NP_001288034 (OMIM: 609854) phosphopantothenoylcystein (81 aa) initn: 561 init1: 561 opt: 561 Z-score: 788.2 bits: 151.4 E(85289): 3.6e-37 Smith-Waterman score: 561; 100.0% identity (100.0% similar) in 81 aa overlap (124-204:1-81) 100 110 120 130 140 150 pF1KE9 WADLLLVAPLDANTLGKVASGICDNLLTCVMRAWDRSKPLLFCPAMNTAMWEHPITAQQV :::::::::::::::::::::::::::::: NP_001 MRAWDRSKPLLFCPAMNTAMWEHPITAQQV 10 20 30 160 170 180 190 200 pF1KE9 DQLKAFGYVEIPCVAKKLVCGDEGLGAMAEVGTIVDKVKEVLFQHSGFQQS ::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 DQLKAFGYVEIPCVAKKLVCGDEGLGAMAEVGTIVDKVKEVLFQHSGFQQS 40 50 60 70 80 >>XP_016877953 (OMIM: 609854) PREDICTED: phosphopantothe (136 aa) initn: 693 init1: 416 opt: 417 Z-score: 584.8 bits: 114.6 E(85289): 7.8e-26 Smith-Waterman score: 546; 56.9% identity (57.5% similar) in 181 aa overlap (1-181:1-106) 10 20 30 40 50 60 pF1KE9 MEPKASCPAAAPLMERKFHVLVGVTGSVAALKLPLLVSKLLDIPGLEVAVVTTERAKHFY ::::::::::::::::::::::::::::::::::::::::::::: XP_016 MEPKASCPAAAPLMERKFHVLVGVTGSVAALKLPLLVSKLLDIPG--------------- 10 20 30 40 70 80 90 100 110 120 pF1KE9 SPQDIPVTLYSDADEWEMWKSRSDPVLHIDLRRWADLLLVAPLDANTLGKVASGICDNLL XP_016 ------------------------------------------------------------ 130 140 150 160 170 180 pF1KE9 TCVMRAWDRSKPLLFCPAMNTAMWEHPITAQQVDQLKAFGYVEIPCVAKKLVCGDEGLGA ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: : XP_016 TCVMRAWDRSKPLLFCPAMNTAMWEHPITAQQVDQLKAFGYVEIPCVAKKLVCGDEGWTA 50 60 70 80 90 100 190 200 pF1KE9 MAEVGTIVDKVKEVLFQHSGFQQS . XP_016 VVRSWLTYSLDFPGLRCSSHLSHQRSSQDHR 110 120 130 204 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 10:16:09 2016 done: Tue Nov 8 10:16:10 2016 Total Scan time: 4.170 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]