FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE9657, 169 aa 1>>>pF1KE9657 169 - 169 aa - 169 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.1269+/-0.000913; mu= 12.6678+/- 0.055 mean_var=56.4841+/-10.916, 0's: 0 Z-trim(103.8): 26 B-trim: 3 in 1/52 Lambda= 0.170652 statistics sampled from 7581 (7598) to 7581 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.622), E-opt: 0.2 (0.233), width: 16 Scan time: 1.560 The best scores are: opt bits E(32554) CCDS2975.1 NAA50 gene_id:80218|Hs108|chr3 ( 169) 1126 285.4 1.2e-77 CCDS77791.1 NAA50 gene_id:80218|Hs108|chr3 ( 168) 1109 281.2 2.1e-76 >>CCDS2975.1 NAA50 gene_id:80218|Hs108|chr3 (169 aa) initn: 1126 init1: 1126 opt: 1126 Z-score: 1507.7 bits: 285.4 E(32554): 1.2e-77 Smith-Waterman score: 1126; 100.0% identity (100.0% similar) in 169 aa overlap (1-169:1-169) 10 20 30 40 50 60 pF1KE9 MKGSRIELGDVTPHNIKQLKRLNQVIFPVSYNDKFYKDVLEVGELAKLAYFNDIAVGAVC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS29 MKGSRIELGDVTPHNIKQLKRLNQVIFPVSYNDKFYKDVLEVGELAKLAYFNDIAVGAVC 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE9 CRVDHSQNQKRLYIMTLGCLAPYRRLGIGTKMLNHVLNICEKDGTFDNIYLHVQISNESA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS29 CRVDHSQNQKRLYIMTLGCLAPYRRLGIGTKMLNHVLNICEKDGTFDNIYLHVQISNESA 70 80 90 100 110 120 130 140 150 160 pF1KE9 IDFYRKFGFEIIETKKNYYKRIEPADAHVLQKNLKVPSGQNADVQKTDN ::::::::::::::::::::::::::::::::::::::::::::::::: CCDS29 IDFYRKFGFEIIETKKNYYKRIEPADAHVLQKNLKVPSGQNADVQKTDN 130 140 150 160 >>CCDS77791.1 NAA50 gene_id:80218|Hs108|chr3 (168 aa) initn: 1100 init1: 1100 opt: 1109 Z-score: 1485.1 bits: 281.2 E(32554): 2.1e-76 Smith-Waterman score: 1109; 99.4% identity (99.4% similar) in 169 aa overlap (1-169:1-168) 10 20 30 40 50 60 pF1KE9 MKGSRIELGDVTPHNIKQLKRLNQVIFPVSYNDKFYKDVLEVGELAKLAYFNDIAVGAVC ::: :::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS77 MKG-RIELGDVTPHNIKQLKRLNQVIFPVSYNDKFYKDVLEVGELAKLAYFNDIAVGAVC 10 20 30 40 50 70 80 90 100 110 120 pF1KE9 CRVDHSQNQKRLYIMTLGCLAPYRRLGIGTKMLNHVLNICEKDGTFDNIYLHVQISNESA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS77 CRVDHSQNQKRLYIMTLGCLAPYRRLGIGTKMLNHVLNICEKDGTFDNIYLHVQISNESA 60 70 80 90 100 110 130 140 150 160 pF1KE9 IDFYRKFGFEIIETKKNYYKRIEPADAHVLQKNLKVPSGQNADVQKTDN ::::::::::::::::::::::::::::::::::::::::::::::::: CCDS77 IDFYRKFGFEIIETKKNYYKRIEPADAHVLQKNLKVPSGQNADVQKTDN 120 130 140 150 160 169 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 23:00:40 2016 done: Sun Nov 6 23:00:40 2016 Total Scan time: 1.560 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]