FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6149, 145 aa 1>>>pF1KE6149 145 - 145 aa - 145 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.8416+/-0.000267; mu= 6.7219+/- 0.017 mean_var=128.4144+/-26.189, 0's: 0 Z-trim(122.9): 2 B-trim: 0 in 0/58 Lambda= 0.113179 statistics sampled from 41849 (41851) to 41849 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.824), E-opt: 0.2 (0.491), width: 16 Scan time: 4.070 The best scores are: opt bits E(85289) NP_079088 (OMIM: 606602) brain and acute leukemia ( 145) 997 172.4 2.3e-43 NP_001019543 (OMIM: 606602) brain and acute leukem ( 54) 383 71.8 1.6e-13 >>NP_079088 (OMIM: 606602) brain and acute leukemia cyto (145 aa) initn: 997 init1: 997 opt: 997 Z-score: 899.4 bits: 172.4 E(85289): 2.3e-43 Smith-Waterman score: 997; 100.0% identity (100.0% similar) in 145 aa overlap (1-145:1-145) 10 20 30 40 50 60 pF1KE6 MGCGGSRADAIEPRYYESWTRETESTWLTYTDSDAPPSAAAPDSGPEAGGLHSGMLEDGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_079 MGCGGSRADAIEPRYYESWTRETESTWLTYTDSDAPPSAAAPDSGPEAGGLHSGMLEDGL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 PSNGVPRSTAPGGIPNPEKKTNCETQCPNPQSLSSGPLTQKQNGLQTTEAKRDAKRMPAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_079 PSNGVPRSTAPGGIPNPEKKTNCETQCPNPQSLSSGPLTQKQNGLQTTEAKRDAKRMPAK 70 80 90 100 110 120 130 140 pF1KE6 EVTINVTDSIQQMDRSRRITKNCVN ::::::::::::::::::::::::: NP_079 EVTINVTDSIQQMDRSRRITKNCVN 130 140 >>NP_001019543 (OMIM: 606602) brain and acute leukemia c (54 aa) initn: 383 init1: 383 opt: 383 Z-score: 363.5 bits: 71.8 E(85289): 1.6e-13 Smith-Waterman score: 383; 100.0% identity (100.0% similar) in 54 aa overlap (1-54:1-54) 10 20 30 40 50 60 pF1KE6 MGCGGSRADAIEPRYYESWTRETESTWLTYTDSDAPPSAAAPDSGPEAGGLHSGMLEDGL :::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MGCGGSRADAIEPRYYESWTRETESTWLTYTDSDAPPSAAAPDSGPEAGGLHSG 10 20 30 40 50 70 80 90 100 110 120 pF1KE6 PSNGVPRSTAPGGIPNPEKKTNCETQCPNPQSLSSGPLTQKQNGLQTTEAKRDAKRMPAK 145 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 09:52:53 2016 done: Tue Nov 8 09:52:53 2016 Total Scan time: 4.070 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]