FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6331, 399 aa 1>>>pF1KE6331 399 - 399 aa - 399 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 8.0849+/-0.000488; mu= 2.0541+/- 0.030 mean_var=168.1072+/-34.143, 0's: 0 Z-trim(113.2): 170 B-trim: 7 in 2/58 Lambda= 0.098919 statistics sampled from 22267 (22458) to 22267 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.624), E-opt: 0.2 (0.263), width: 16 Scan time: 5.410 The best scores are: opt bits E(85289) NP_009199 (OMIM: 300353) V-set and immunoglobulin ( 399) 2669 393.7 4.1e-109 NP_001171759 (OMIM: 300353) V-set and immunoglobul ( 321) 2148 319.3 8.2e-87 NP_001244332 (OMIM: 300353) V-set and immunoglobul ( 347) 2141 318.3 1.7e-86 NP_001093901 (OMIM: 300353) V-set and immunoglobul ( 305) 1121 172.7 1e-42 NP_001171760 (OMIM: 300353) V-set and immunoglobul ( 227) 938 146.5 6e-35 XP_016884740 (OMIM: 300353) PREDICTED: V-set and i ( 253) 938 146.6 6.5e-35 NP_005805 (OMIM: 602171) cell surface A33 antigen ( 319) 238 46.7 9.3e-05 XP_011527778 (OMIM: 602621) PREDICTED: coxsackievi ( 348) 219 44.0 0.00065 NP_001193995 (OMIM: 602621) coxsackievirus and ade ( 352) 219 44.1 0.00066 NP_001329 (OMIM: 602621) coxsackievirus and adenov ( 365) 219 44.1 0.00068 >>NP_009199 (OMIM: 300353) V-set and immunoglobulin doma (399 aa) initn: 2669 init1: 2669 opt: 2669 Z-score: 2080.0 bits: 393.7 E(85289): 4.1e-109 Smith-Waterman score: 2669; 100.0% identity (100.0% similar) in 399 aa overlap (1-399:1-399) 10 20 30 40 50 60 pF1KE6 MGILLGLLLLGHLTVDTYGRPILEVPESVTGPWKGDVNLPCTYDPLQGYTQVLVKWLVQR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_009 MGILLGLLLLGHLTVDTYGRPILEVPESVTGPWKGDVNLPCTYDPLQGYTQVLVKWLVQR 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 GSDPVTIFLRDSSGDHIQQAKYQGRLHVSHKVPGDVSLQLSTLEMDDRSHYTCEVTWQTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_009 GSDPVTIFLRDSSGDHIQQAKYQGRLHVSHKVPGDVSLQLSTLEMDDRSHYTCEVTWQTP 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 DGNQVVRDKITELRVQKLSVSKPTVTTGSGYGFTVPQGMRISLQCQARGSPPISYIWYKQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_009 DGNQVVRDKITELRVQKLSVSKPTVTTGSGYGFTVPQGMRISLQCQARGSPPISYIWYKQ 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 QTNNQEPIKVATLSTLLFKPAVIADSGSYFCTAKGQVGSEQHSDIVKFVVKDSSKLLKTK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_009 QTNNQEPIKVATLSTLLFKPAVIADSGSYFCTAKGQVGSEQHSDIVKFVVKDSSKLLKTK 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE6 TEAPTTMTYPLKATSTVKQSWDWTTDMDGYLGETSAGPGKSLPVFAIILIISLCCMVVFT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_009 TEAPTTMTYPLKATSTVKQSWDWTTDMDGYLGETSAGPGKSLPVFAIILIISLCCMVVFT 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE6 MAYIMLCRKTSQQEHVYEAARAHAREANDSGETMRVAIFASGCSSDEPTSQNLGNNYSDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_009 MAYIMLCRKTSQQEHVYEAARAHAREANDSGETMRVAIFASGCSSDEPTSQNLGNNYSDE 310 320 330 340 350 360 370 380 390 pF1KE6 PCIGQEYQIIAQINGNYARLLDTVPLDYEFLATEGKSVC ::::::::::::::::::::::::::::::::::::::: NP_009 PCIGQEYQIIAQINGNYARLLDTVPLDYEFLATEGKSVC 370 380 390 >>NP_001171759 (OMIM: 300353) V-set and immunoglobulin d (321 aa) initn: 2148 init1: 2148 opt: 2148 Z-score: 1679.5 bits: 319.3 E(85289): 8.2e-87 Smith-Waterman score: 2148; 100.0% identity (100.0% similar) in 321 aa overlap (1-321:1-321) 10 20 30 40 50 60 pF1KE6 MGILLGLLLLGHLTVDTYGRPILEVPESVTGPWKGDVNLPCTYDPLQGYTQVLVKWLVQR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MGILLGLLLLGHLTVDTYGRPILEVPESVTGPWKGDVNLPCTYDPLQGYTQVLVKWLVQR 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 GSDPVTIFLRDSSGDHIQQAKYQGRLHVSHKVPGDVSLQLSTLEMDDRSHYTCEVTWQTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 GSDPVTIFLRDSSGDHIQQAKYQGRLHVSHKVPGDVSLQLSTLEMDDRSHYTCEVTWQTP 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 DGNQVVRDKITELRVQKLSVSKPTVTTGSGYGFTVPQGMRISLQCQARGSPPISYIWYKQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 DGNQVVRDKITELRVQKLSVSKPTVTTGSGYGFTVPQGMRISLQCQARGSPPISYIWYKQ 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 QTNNQEPIKVATLSTLLFKPAVIADSGSYFCTAKGQVGSEQHSDIVKFVVKDSSKLLKTK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 QTNNQEPIKVATLSTLLFKPAVIADSGSYFCTAKGQVGSEQHSDIVKFVVKDSSKLLKTK 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE6 TEAPTTMTYPLKATSTVKQSWDWTTDMDGYLGETSAGPGKSLPVFAIILIISLCCMVVFT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 TEAPTTMTYPLKATSTVKQSWDWTTDMDGYLGETSAGPGKSLPVFAIILIISLCCMVVFT 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE6 MAYIMLCRKTSQQEHVYEAARAHAREANDSGETMRVAIFASGCSSDEPTSQNLGNNYSDE ::::::::::::::::::::: NP_001 MAYIMLCRKTSQQEHVYEAAR 310 320 >>NP_001244332 (OMIM: 300353) V-set and immunoglobulin d (347 aa) initn: 2141 init1: 2141 opt: 2141 Z-score: 1673.6 bits: 318.3 E(85289): 1.7e-86 Smith-Waterman score: 2141; 100.0% identity (100.0% similar) in 320 aa overlap (1-320:1-320) 10 20 30 40 50 60 pF1KE6 MGILLGLLLLGHLTVDTYGRPILEVPESVTGPWKGDVNLPCTYDPLQGYTQVLVKWLVQR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MGILLGLLLLGHLTVDTYGRPILEVPESVTGPWKGDVNLPCTYDPLQGYTQVLVKWLVQR 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 GSDPVTIFLRDSSGDHIQQAKYQGRLHVSHKVPGDVSLQLSTLEMDDRSHYTCEVTWQTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 GSDPVTIFLRDSSGDHIQQAKYQGRLHVSHKVPGDVSLQLSTLEMDDRSHYTCEVTWQTP 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 DGNQVVRDKITELRVQKLSVSKPTVTTGSGYGFTVPQGMRISLQCQARGSPPISYIWYKQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 DGNQVVRDKITELRVQKLSVSKPTVTTGSGYGFTVPQGMRISLQCQARGSPPISYIWYKQ 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 QTNNQEPIKVATLSTLLFKPAVIADSGSYFCTAKGQVGSEQHSDIVKFVVKDSSKLLKTK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 QTNNQEPIKVATLSTLLFKPAVIADSGSYFCTAKGQVGSEQHSDIVKFVVKDSSKLLKTK 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE6 TEAPTTMTYPLKATSTVKQSWDWTTDMDGYLGETSAGPGKSLPVFAIILIISLCCMVVFT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 TEAPTTMTYPLKATSTVKQSWDWTTDMDGYLGETSAGPGKSLPVFAIILIISLCCMVVFT 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE6 MAYIMLCRKTSQQEHVYEAARAHAREANDSGETMRVAIFASGCSSDEPTSQNLGNNYSDE :::::::::::::::::::: NP_001 MAYIMLCRKTSQQEHVYEAASPKCPPTNTGAAGSHWLCPGICQMHLK 310 320 330 340 >>NP_001093901 (OMIM: 300353) V-set and immunoglobulin d (305 aa) initn: 1112 init1: 1112 opt: 1121 Z-score: 887.7 bits: 172.7 E(85289): 1e-42 Smith-Waterman score: 1843; 76.4% identity (76.4% similar) in 399 aa overlap (1-399:1-305) 10 20 30 40 50 60 pF1KE6 MGILLGLLLLGHLTVDTYGRPILEVPESVTGPWKGDVNLPCTYDPLQGYTQVLVKWLVQR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MGILLGLLLLGHLTVDTYGRPILEVPESVTGPWKGDVNLPCTYDPLQGYTQVLVKWLVQR 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 GSDPVTIFLRDSSGDHIQQAKYQGRLHVSHKVPGDVSLQLSTLEMDDRSHYTCEVTWQTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 GSDPVTIFLRDSSGDHIQQAKYQGRLHVSHKVPGDVSLQLSTLEMDDRSHYTCEVTWQTP 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 DGNQVVRDKITELRVQKLSVSKPTVTTGSGYGFTVPQGMRISLQCQARGSPPISYIWYKQ ::::::::::::::::: NP_001 DGNQVVRDKITELRVQK------------------------------------------- 130 190 200 210 220 230 240 pF1KE6 QTNNQEPIKVATLSTLLFKPAVIADSGSYFCTAKGQVGSEQHSDIVKFVVKDSSKLLKTK :: ::::::: NP_001 -----------------------------------------HS----------SKLLKTK 140 250 260 270 280 290 300 pF1KE6 TEAPTTMTYPLKATSTVKQSWDWTTDMDGYLGETSAGPGKSLPVFAIILIISLCCMVVFT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 TEAPTTMTYPLKATSTVKQSWDWTTDMDGYLGETSAGPGKSLPVFAIILIISLCCMVVFT 150 160 170 180 190 200 310 320 330 340 350 360 pF1KE6 MAYIMLCRKTSQQEHVYEAARAHAREANDSGETMRVAIFASGCSSDEPTSQNLGNNYSDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MAYIMLCRKTSQQEHVYEAARAHAREANDSGETMRVAIFASGCSSDEPTSQNLGNNYSDE 210 220 230 240 250 260 370 380 390 pF1KE6 PCIGQEYQIIAQINGNYARLLDTVPLDYEFLATEGKSVC ::::::::::::::::::::::::::::::::::::::: NP_001 PCIGQEYQIIAQINGNYARLLDTVPLDYEFLATEGKSVC 270 280 290 300 >>NP_001171760 (OMIM: 300353) V-set and immunoglobulin d (227 aa) initn: 938 init1: 938 opt: 938 Z-score: 748.4 bits: 146.5 E(85289): 6e-35 Smith-Waterman score: 1322; 70.7% identity (70.7% similar) in 321 aa overlap (1-321:1-227) 10 20 30 40 50 60 pF1KE6 MGILLGLLLLGHLTVDTYGRPILEVPESVTGPWKGDVNLPCTYDPLQGYTQVLVKWLVQR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MGILLGLLLLGHLTVDTYGRPILEVPESVTGPWKGDVNLPCTYDPLQGYTQVLVKWLVQR 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 GSDPVTIFLRDSSGDHIQQAKYQGRLHVSHKVPGDVSLQLSTLEMDDRSHYTCEVTWQTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 GSDPVTIFLRDSSGDHIQQAKYQGRLHVSHKVPGDVSLQLSTLEMDDRSHYTCEVTWQTP 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 DGNQVVRDKITELRVQKLSVSKPTVTTGSGYGFTVPQGMRISLQCQARGSPPISYIWYKQ ::::::::::::::::: NP_001 DGNQVVRDKITELRVQK------------------------------------------- 130 190 200 210 220 230 240 pF1KE6 QTNNQEPIKVATLSTLLFKPAVIADSGSYFCTAKGQVGSEQHSDIVKFVVKDSSKLLKTK :: ::::::: NP_001 -----------------------------------------HS----------SKLLKTK 140 250 260 270 280 290 300 pF1KE6 TEAPTTMTYPLKATSTVKQSWDWTTDMDGYLGETSAGPGKSLPVFAIILIISLCCMVVFT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 TEAPTTMTYPLKATSTVKQSWDWTTDMDGYLGETSAGPGKSLPVFAIILIISLCCMVVFT 150 160 170 180 190 200 310 320 330 340 350 360 pF1KE6 MAYIMLCRKTSQQEHVYEAARAHAREANDSGETMRVAIFASGCSSDEPTSQNLGNNYSDE ::::::::::::::::::::: NP_001 MAYIMLCRKTSQQEHVYEAAR 210 220 >>XP_016884740 (OMIM: 300353) PREDICTED: V-set and immun (253 aa) initn: 938 init1: 938 opt: 938 Z-score: 747.8 bits: 146.6 E(85289): 6.5e-35 Smith-Waterman score: 1315; 70.6% identity (70.6% similar) in 320 aa overlap (1-320:1-226) 10 20 30 40 50 60 pF1KE6 MGILLGLLLLGHLTVDTYGRPILEVPESVTGPWKGDVNLPCTYDPLQGYTQVLVKWLVQR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MGILLGLLLLGHLTVDTYGRPILEVPESVTGPWKGDVNLPCTYDPLQGYTQVLVKWLVQR 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 GSDPVTIFLRDSSGDHIQQAKYQGRLHVSHKVPGDVSLQLSTLEMDDRSHYTCEVTWQTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 GSDPVTIFLRDSSGDHIQQAKYQGRLHVSHKVPGDVSLQLSTLEMDDRSHYTCEVTWQTP 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 DGNQVVRDKITELRVQKLSVSKPTVTTGSGYGFTVPQGMRISLQCQARGSPPISYIWYKQ ::::::::::::::::: XP_016 DGNQVVRDKITELRVQK------------------------------------------- 130 190 200 210 220 230 240 pF1KE6 QTNNQEPIKVATLSTLLFKPAVIADSGSYFCTAKGQVGSEQHSDIVKFVVKDSSKLLKTK :: ::::::: XP_016 -----------------------------------------HS----------SKLLKTK 140 250 260 270 280 290 300 pF1KE6 TEAPTTMTYPLKATSTVKQSWDWTTDMDGYLGETSAGPGKSLPVFAIILIISLCCMVVFT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 TEAPTTMTYPLKATSTVKQSWDWTTDMDGYLGETSAGPGKSLPVFAIILIISLCCMVVFT 150 160 170 180 190 200 310 320 330 340 350 360 pF1KE6 MAYIMLCRKTSQQEHVYEAARAHAREANDSGETMRVAIFASGCSSDEPTSQNLGNNYSDE :::::::::::::::::::: XP_016 MAYIMLCRKTSQQEHVYEAASPKCPPTNTGAAGSHWLCPGICQMHLK 210 220 230 240 250 >>NP_005805 (OMIM: 602171) cell surface A33 antigen prec (319 aa) initn: 145 init1: 54 opt: 238 Z-score: 206.4 bits: 46.7 E(85289): 9.3e-05 Smith-Waterman score: 238; 28.7% identity (58.8% similar) in 216 aa overlap (13-220:17-220) 10 20 30 40 50 pF1KE6 MGILLGLLLLGHLTVDTYGRPILEVPESVTGPWKG-DVNLPCTYDPLQGYTQVLVK .:::. . .:.:..: .: .:.::::: . . :.. NP_005 MVGKMWPVLWTLCAVRVTVDAIS---VETPQDVLRASQGKSVTLPCTYHTSTSSREGLIQ 10 20 30 40 50 60 70 80 90 100 110 pF1KE6 W--LVQRGSDPVTIFLRDSSGDHIQQAKYQGRLHVSHKVP-GDVSLQLSTLEMDDRSHYT : :. .. :.:. :. ..:. :..:. .:... .:.:. .. : : : . : NP_005 WDKLLLTHTERVVIWPF-SNKNYIHGELYKNRVSISNNAEQSDASITIDQLTMADNGTYE 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE6 CEVTWQTP-DGNQVVRDKITELRVQKLSVSKPTVTTGSGYGFTVPQGMRISLQCQAR-GS : :. .. .:: :. ::. : . :. . : :. : :.: ::.. :: NP_005 CSVSLMSDLEGN-------TKSRVRLLVLVPPSKPECGIEGETII-GNNIQLTCQSKEGS 120 130 140 150 160 180 190 200 210 220 pF1KE6 PPISYIWYKQQTNNQE-PI-KVATLSTLLFKPAVIADSGSYFCTAKGQVGSEQHSDIVKF : .: : . . ::: :. . :. . . .: :: :.::.... :.. NP_005 PTPQYSWKRYNILNQEQPLAQPASGQPVSLKNISTDTSGYYICTSSNEEGTQFCNITVAV 170 180 190 200 210 220 230 240 250 260 270 280 pF1KE6 VVKDSSKLLKTKTEAPTTMTYPLKATSTVKQSWDWTTDMDGYLGETSAGPGKSLPVFAII NP_005 RSPSMNVALYVGIAVGVVAALIIIGIIIYCCCCRGKDDNTEDKEDARPNREAYEEPPEQL 230 240 250 260 270 280 >>XP_011527778 (OMIM: 602621) PREDICTED: coxsackievirus (348 aa) initn: 98 init1: 69 opt: 219 Z-score: 191.2 bits: 44.0 E(85289): 0.00065 Smith-Waterman score: 219; 27.6% identity (58.2% similar) in 239 aa overlap (1-221:1-222) 10 20 30 40 50 pF1KE6 MGILLGLLLLGHLTVDTYGRPI-LEVPESVTGPWKGDVN-LPC--TYDPL-QGYTQVLVK :..:: ..:: . :: ..: . . .:: . ::.. ::: : .: :: . .. XP_011 MALLLCFVLLCGV-VD-FARSLSITTPEEMIEKAKGETAYLPCKFTLSPEDQGPLD--IE 10 20 30 40 50 60 70 80 90 100 pF1KE6 WLVQRGS----DPVTIFLRDSSGDHIQQAKY---QGRLHVSHK--VPGDVSLQLSTLEMD ::.. .. : : :. :::.: . : .::.: . . ::.:.....:... XP_011 WLISPADNQKVDQVIILY---SGDKIYDDYYPDLKGRVHFTSNDLKSGDASINVTNLQLS 60 70 80 90 100 110 110 120 130 140 150 160 pF1KE6 DRSHYTCEVTWQTPDGNQVVRDKITELRVQKLSVSKPTVTTGSGYGFTVPQGMRISLQCQ : . : :.: ..: ... ... . . ::. . : . : ....:. XP_011 DIGTYQCKVK-KAPG--------VANKKIHLVVLVKPSGARCYVDG-SEEIGSDFKIKCE 120 130 140 150 160 170 180 190 200 210 220 pF1KE6 AR-GSPPISYIWYKQQTNNQEP---IKVATLSTLLFKPAVIADSGSYFCTAKGQVGSEQH . :: :..: : : . ... : . : :.. : : ::.: ::....:::.: XP_011 PKEGSLPLQYEWQKLSDSQKMPTSWLAEMTSSVISVKNASSEYSGTYSCTVRNRVGSDQC 170 180 190 200 210 220 230 240 250 260 270 280 pF1KE6 SDIVKFVVKDSSKLLKTKTEAPTTMTYPLKATSTVKQSWDWTTDMDGYLGETSAGPGKSL XP_011 LLRLNVVPPSNKAGLIAGAIIGTLLALALIGLIIFCCRKKRREEKYEKEVHHDIREDVPP 230 240 250 260 270 280 >>NP_001193995 (OMIM: 602621) coxsackievirus and adenovi (352 aa) initn: 98 init1: 69 opt: 219 Z-score: 191.2 bits: 44.1 E(85289): 0.00066 Smith-Waterman score: 219; 27.6% identity (58.2% similar) in 239 aa overlap (1-221:1-222) 10 20 30 40 50 pF1KE6 MGILLGLLLLGHLTVDTYGRPI-LEVPESVTGPWKGDVN-LPC--TYDPL-QGYTQVLVK :..:: ..:: . :: ..: . . .:: . ::.. ::: : .: :: . .. NP_001 MALLLCFVLLCGV-VD-FARSLSITTPEEMIEKAKGETAYLPCKFTLSPEDQGPLD--IE 10 20 30 40 50 60 70 80 90 100 pF1KE6 WLVQRGS----DPVTIFLRDSSGDHIQQAKY---QGRLHVSHK--VPGDVSLQLSTLEMD ::.. .. : : :. :::.: . : .::.: . . ::.:.....:... NP_001 WLISPADNQKVDQVIILY---SGDKIYDDYYPDLKGRVHFTSNDLKSGDASINVTNLQLS 60 70 80 90 100 110 110 120 130 140 150 160 pF1KE6 DRSHYTCEVTWQTPDGNQVVRDKITELRVQKLSVSKPTVTTGSGYGFTVPQGMRISLQCQ : . : :.: ..: ... ... . . ::. . : . : ....:. NP_001 DIGTYQCKVK-KAPG--------VANKKIHLVVLVKPSGARCYVDG-SEEIGSDFKIKCE 120 130 140 150 160 170 180 190 200 210 220 pF1KE6 AR-GSPPISYIWYKQQTNNQEP---IKVATLSTLLFKPAVIADSGSYFCTAKGQVGSEQH . :: :..: : : . ... : . : :.. : : ::.: ::....:::.: NP_001 PKEGSLPLQYEWQKLSDSQKMPTSWLAEMTSSVISVKNASSEYSGTYSCTVRNRVGSDQC 170 180 190 200 210 220 230 240 250 260 270 280 pF1KE6 SDIVKFVVKDSSKLLKTKTEAPTTMTYPLKATSTVKQSWDWTTDMDGYLGETSAGPGKSL NP_001 LLRLNVVPPSNKAGLIAGAIIGTLLALALIGLIIFCCRKKRREEKYEKEVHHDIREDVPP 230 240 250 260 270 280 >>NP_001329 (OMIM: 602621) coxsackievirus and adenovirus (365 aa) initn: 98 init1: 69 opt: 219 Z-score: 190.9 bits: 44.1 E(85289): 0.00068 Smith-Waterman score: 219; 27.6% identity (58.2% similar) in 239 aa overlap (1-221:1-222) 10 20 30 40 50 pF1KE6 MGILLGLLLLGHLTVDTYGRPI-LEVPESVTGPWKGDVN-LPC--TYDPL-QGYTQVLVK :..:: ..:: . :: ..: . . .:: . ::.. ::: : .: :: . .. NP_001 MALLLCFVLLCGV-VD-FARSLSITTPEEMIEKAKGETAYLPCKFTLSPEDQGPLD--IE 10 20 30 40 50 60 70 80 90 100 pF1KE6 WLVQRGS----DPVTIFLRDSSGDHIQQAKY---QGRLHVSHK--VPGDVSLQLSTLEMD ::.. .. : : :. :::.: . : .::.: . . ::.:.....:... NP_001 WLISPADNQKVDQVIILY---SGDKIYDDYYPDLKGRVHFTSNDLKSGDASINVTNLQLS 60 70 80 90 100 110 110 120 130 140 150 160 pF1KE6 DRSHYTCEVTWQTPDGNQVVRDKITELRVQKLSVSKPTVTTGSGYGFTVPQGMRISLQCQ : . : :.: ..: ... ... . . ::. . : . : ....:. NP_001 DIGTYQCKVK-KAPG--------VANKKIHLVVLVKPSGARCYVDG-SEEIGSDFKIKCE 120 130 140 150 160 170 180 190 200 210 220 pF1KE6 AR-GSPPISYIWYKQQTNNQEP---IKVATLSTLLFKPAVIADSGSYFCTAKGQVGSEQH . :: :..: : : . ... : . : :.. : : ::.: ::....:::.: NP_001 PKEGSLPLQYEWQKLSDSQKMPTSWLAEMTSSVISVKNASSEYSGTYSCTVRNRVGSDQC 170 180 190 200 210 220 230 240 250 260 270 280 pF1KE6 SDIVKFVVKDSSKLLKTKTEAPTTMTYPLKATSTVKQSWDWTTDMDGYLGETSAGPGKSL NP_001 LLRLNVVPPSNKAGLIAGAIIGTLLALALIGLIIFCCRKKRREEKYEKEVHHDIREDVPP 230 240 250 260 270 280 399 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 12:10:57 2016 done: Tue Nov 8 12:10:58 2016 Total Scan time: 5.410 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]