FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6331, 399 aa 1>>>pF1KE6331 399 - 399 aa - 399 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 7.6344+/-0.00103; mu= 4.6086+/- 0.061 mean_var=123.3553+/-24.387, 0's: 0 Z-trim(106.6): 100 B-trim: 2 in 1/52 Lambda= 0.115477 statistics sampled from 8951 (9055) to 8951 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.642), E-opt: 0.2 (0.278), width: 16 Scan time: 1.950 The best scores are: opt bits E(32554) CCDS14383.1 VSIG4 gene_id:11326|Hs108|chrX ( 399) 2669 456.2 2.4e-128 CCDS55435.1 VSIG4 gene_id:11326|Hs108|chrX ( 321) 2148 369.4 2.6e-102 CCDS48132.1 VSIG4 gene_id:11326|Hs108|chrX ( 305) 1121 198.3 8.1e-51 >>CCDS14383.1 VSIG4 gene_id:11326|Hs108|chrX (399 aa) initn: 2669 init1: 2669 opt: 2669 Z-score: 2417.7 bits: 456.2 E(32554): 2.4e-128 Smith-Waterman score: 2669; 100.0% identity (100.0% similar) in 399 aa overlap (1-399:1-399) 10 20 30 40 50 60 pF1KE6 MGILLGLLLLGHLTVDTYGRPILEVPESVTGPWKGDVNLPCTYDPLQGYTQVLVKWLVQR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 MGILLGLLLLGHLTVDTYGRPILEVPESVTGPWKGDVNLPCTYDPLQGYTQVLVKWLVQR 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 GSDPVTIFLRDSSGDHIQQAKYQGRLHVSHKVPGDVSLQLSTLEMDDRSHYTCEVTWQTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 GSDPVTIFLRDSSGDHIQQAKYQGRLHVSHKVPGDVSLQLSTLEMDDRSHYTCEVTWQTP 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 DGNQVVRDKITELRVQKLSVSKPTVTTGSGYGFTVPQGMRISLQCQARGSPPISYIWYKQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 DGNQVVRDKITELRVQKLSVSKPTVTTGSGYGFTVPQGMRISLQCQARGSPPISYIWYKQ 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 QTNNQEPIKVATLSTLLFKPAVIADSGSYFCTAKGQVGSEQHSDIVKFVVKDSSKLLKTK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 QTNNQEPIKVATLSTLLFKPAVIADSGSYFCTAKGQVGSEQHSDIVKFVVKDSSKLLKTK 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE6 TEAPTTMTYPLKATSTVKQSWDWTTDMDGYLGETSAGPGKSLPVFAIILIISLCCMVVFT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 TEAPTTMTYPLKATSTVKQSWDWTTDMDGYLGETSAGPGKSLPVFAIILIISLCCMVVFT 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE6 MAYIMLCRKTSQQEHVYEAARAHAREANDSGETMRVAIFASGCSSDEPTSQNLGNNYSDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 MAYIMLCRKTSQQEHVYEAARAHAREANDSGETMRVAIFASGCSSDEPTSQNLGNNYSDE 310 320 330 340 350 360 370 380 390 pF1KE6 PCIGQEYQIIAQINGNYARLLDTVPLDYEFLATEGKSVC ::::::::::::::::::::::::::::::::::::::: CCDS14 PCIGQEYQIIAQINGNYARLLDTVPLDYEFLATEGKSVC 370 380 390 >>CCDS55435.1 VSIG4 gene_id:11326|Hs108|chrX (321 aa) initn: 2148 init1: 2148 opt: 2148 Z-score: 1950.2 bits: 369.4 E(32554): 2.6e-102 Smith-Waterman score: 2148; 100.0% identity (100.0% similar) in 321 aa overlap (1-321:1-321) 10 20 30 40 50 60 pF1KE6 MGILLGLLLLGHLTVDTYGRPILEVPESVTGPWKGDVNLPCTYDPLQGYTQVLVKWLVQR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 MGILLGLLLLGHLTVDTYGRPILEVPESVTGPWKGDVNLPCTYDPLQGYTQVLVKWLVQR 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 GSDPVTIFLRDSSGDHIQQAKYQGRLHVSHKVPGDVSLQLSTLEMDDRSHYTCEVTWQTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 GSDPVTIFLRDSSGDHIQQAKYQGRLHVSHKVPGDVSLQLSTLEMDDRSHYTCEVTWQTP 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 DGNQVVRDKITELRVQKLSVSKPTVTTGSGYGFTVPQGMRISLQCQARGSPPISYIWYKQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 DGNQVVRDKITELRVQKLSVSKPTVTTGSGYGFTVPQGMRISLQCQARGSPPISYIWYKQ 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 QTNNQEPIKVATLSTLLFKPAVIADSGSYFCTAKGQVGSEQHSDIVKFVVKDSSKLLKTK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 QTNNQEPIKVATLSTLLFKPAVIADSGSYFCTAKGQVGSEQHSDIVKFVVKDSSKLLKTK 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE6 TEAPTTMTYPLKATSTVKQSWDWTTDMDGYLGETSAGPGKSLPVFAIILIISLCCMVVFT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 TEAPTTMTYPLKATSTVKQSWDWTTDMDGYLGETSAGPGKSLPVFAIILIISLCCMVVFT 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE6 MAYIMLCRKTSQQEHVYEAARAHAREANDSGETMRVAIFASGCSSDEPTSQNLGNNYSDE ::::::::::::::::::::: CCDS55 MAYIMLCRKTSQQEHVYEAAR 310 320 >>CCDS48132.1 VSIG4 gene_id:11326|Hs108|chrX (305 aa) initn: 1112 init1: 1112 opt: 1121 Z-score: 1025.8 bits: 198.3 E(32554): 8.1e-51 Smith-Waterman score: 1843; 76.4% identity (76.4% similar) in 399 aa overlap (1-399:1-305) 10 20 30 40 50 60 pF1KE6 MGILLGLLLLGHLTVDTYGRPILEVPESVTGPWKGDVNLPCTYDPLQGYTQVLVKWLVQR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS48 MGILLGLLLLGHLTVDTYGRPILEVPESVTGPWKGDVNLPCTYDPLQGYTQVLVKWLVQR 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 GSDPVTIFLRDSSGDHIQQAKYQGRLHVSHKVPGDVSLQLSTLEMDDRSHYTCEVTWQTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS48 GSDPVTIFLRDSSGDHIQQAKYQGRLHVSHKVPGDVSLQLSTLEMDDRSHYTCEVTWQTP 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 DGNQVVRDKITELRVQKLSVSKPTVTTGSGYGFTVPQGMRISLQCQARGSPPISYIWYKQ ::::::::::::::::: CCDS48 DGNQVVRDKITELRVQK------------------------------------------- 130 190 200 210 220 230 240 pF1KE6 QTNNQEPIKVATLSTLLFKPAVIADSGSYFCTAKGQVGSEQHSDIVKFVVKDSSKLLKTK :: ::::::: CCDS48 -----------------------------------------HS----------SKLLKTK 140 250 260 270 280 290 300 pF1KE6 TEAPTTMTYPLKATSTVKQSWDWTTDMDGYLGETSAGPGKSLPVFAIILIISLCCMVVFT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS48 TEAPTTMTYPLKATSTVKQSWDWTTDMDGYLGETSAGPGKSLPVFAIILIISLCCMVVFT 150 160 170 180 190 200 310 320 330 340 350 360 pF1KE6 MAYIMLCRKTSQQEHVYEAARAHAREANDSGETMRVAIFASGCSSDEPTSQNLGNNYSDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS48 MAYIMLCRKTSQQEHVYEAARAHAREANDSGETMRVAIFASGCSSDEPTSQNLGNNYSDE 210 220 230 240 250 260 370 380 390 pF1KE6 PCIGQEYQIIAQINGNYARLLDTVPLDYEFLATEGKSVC ::::::::::::::::::::::::::::::::::::::: CCDS48 PCIGQEYQIIAQINGNYARLLDTVPLDYEFLATEGKSVC 270 280 290 300 399 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 12:10:57 2016 done: Tue Nov 8 12:10:57 2016 Total Scan time: 1.950 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]