FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5207, 178 aa 1>>>pF1KE5207 178 - 178 aa - 178 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 8.2838+/-0.000765; mu= -0.1587+/- 0.046 mean_var=149.5087+/-29.469, 0's: 0 Z-trim(114.0): 26 B-trim: 24 in 1/52 Lambda= 0.104892 statistics sampled from 14527 (14549) to 14527 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.79), E-opt: 0.2 (0.447), width: 16 Scan time: 1.960 The best scores are: opt bits E(32554) CCDS12447.1 FXYD5 gene_id:53827|Hs108|chr19 ( 178) 1185 189.8 7.6e-49 CCDS82328.1 FXYD5 gene_id:53827|Hs108|chr19 ( 194) 1075 173.2 8.4e-44 >>CCDS12447.1 FXYD5 gene_id:53827|Hs108|chr19 (178 aa) initn: 1185 init1: 1185 opt: 1185 Z-score: 990.4 bits: 189.8 E(32554): 7.6e-49 Smith-Waterman score: 1185; 99.4% identity (100.0% similar) in 178 aa overlap (1-178:1-178) 10 20 30 40 50 60 pF1KE5 MSPSGRLCLLTIVGLILPTRGQTLKDTTSSSSADSTIMDIQVPTRAPDAVYTELQPTSPT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 MSPSGRLCLLTIVGLILPTRGQTLKDTTSSSSADSTIMDIQVPTRAPDAVYTELQPTSPT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 PTWPADETPQPQTQTQQLEGTDGPLVTDPETHKSTKAAHPTDDTTTLSERPSPSTDVQTD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 PTWPADETPQPQTQTQQLEGTDGPLVTDPETHKSTKAAHPTDDTTTLSERPSPSTDVQTD 70 80 90 100 110 120 130 140 150 160 170 pF1KE5 PQTLKPSGFHEDDPFFYDEHTLRKRGLLVAAVLFITGIIILTSGKCRQLSRLCRNHCR :::::::::::::::::::::::::::::::::::::::::::::::::::::::.:: CCDS12 PQTLKPSGFHEDDPFFYDEHTLRKRGLLVAAVLFITGIIILTSGKCRQLSRLCRNRCR 130 140 150 160 170 >>CCDS82328.1 FXYD5 gene_id:53827|Hs108|chr19 (194 aa) initn: 1075 init1: 1075 opt: 1075 Z-score: 899.9 bits: 173.2 E(32554): 8.4e-44 Smith-Waterman score: 1075; 100.0% identity (100.0% similar) in 163 aa overlap (1-163:1-163) 10 20 30 40 50 60 pF1KE5 MSPSGRLCLLTIVGLILPTRGQTLKDTTSSSSADSTIMDIQVPTRAPDAVYTELQPTSPT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 MSPSGRLCLLTIVGLILPTRGQTLKDTTSSSSADSTIMDIQVPTRAPDAVYTELQPTSPT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 PTWPADETPQPQTQTQQLEGTDGPLVTDPETHKSTKAAHPTDDTTTLSERPSPSTDVQTD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 PTWPADETPQPQTQTQQLEGTDGPLVTDPETHKSTKAAHPTDDTTTLSERPSPSTDVQTD 70 80 90 100 110 120 130 140 150 160 170 pF1KE5 PQTLKPSGFHEDDPFFYDEHTLRKRGLLVAAVLFITGIIILTSGKCRQLSRLCRNHCR ::::::::::::::::::::::::::::::::::::::::::: CCDS82 PQTLKPSGFHEDDPFFYDEHTLRKRGLLVAAVLFITGIIILTSENWGWVGRTPRPGGGLM 130 140 150 160 170 180 CCDS82 TEGWVLKGPWAILF 190 178 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 22:30:44 2016 done: Mon Nov 7 22:30:44 2016 Total Scan time: 1.960 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]