FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1423, 448 aa 1>>>pF1KE1423 448 - 448 aa - 448 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.8660+/-0.000377; mu= 19.6511+/- 0.024 mean_var=58.9454+/-11.771, 0's: 0 Z-trim(111.7): 67 B-trim: 346 in 1/50 Lambda= 0.167051 statistics sampled from 20368 (20437) to 20368 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.624), E-opt: 0.2 (0.24), width: 16 Scan time: 8.600 The best scores are: opt bits E(85289) NP_005991 (OMIM: 191110,616208) tubulin alpha-4A c ( 448) 3047 743.0 3.8e-214 NP_001265481 (OMIM: 191110,616208) tubulin alpha-4 ( 433) 2944 718.1 1.1e-206 NP_006073 (OMIM: 602530) tubulin alpha-1B chain [H ( 451) 2941 717.4 1.9e-206 NP_006000 (OMIM: 602529,611603) tubulin alpha-1A c ( 451) 2933 715.5 7.2e-206 NP_001257328 (OMIM: 602529,611603) tubulin alpha-1 ( 451) 2933 715.5 7.2e-206 NP_005992 (OMIM: 602528) tubulin alpha-3C/D chain ( 450) 2907 709.2 5.5e-204 NP_061816 (OMIM: 605742,613180) tubulin alpha-8 ch ( 449) 2782 679.1 6.4e-195 NP_001257329 (OMIM: 602529,611603) tubulin alpha-1 ( 416) 2675 653.3 3.5e-187 NP_001180343 (OMIM: 605742,613180) tubulin alpha-8 ( 383) 2425 593.0 4.5e-169 XP_016860313 (OMIM: 191110,616208) PREDICTED: tubu ( 295) 1977 485.0 1.2e-136 NP_821133 (OMIM: 156610,191130,615771) tubulin bet ( 444) 1296 321.0 4.1e-87 NP_001290453 (OMIM: 615103) tubulin beta-6 chain i ( 446) 1280 317.1 6e-86 NP_115914 (OMIM: 615103) tubulin beta-6 chain isof ( 446) 1280 317.1 6e-86 NP_006079 (OMIM: 602660) tubulin beta-4B chain [Ho ( 445) 1272 315.2 2.3e-85 NP_001060 (OMIM: 615101,615763) tubulin beta-2A ch ( 445) 1267 314.0 5.2e-85 NP_821080 (OMIM: 610031,612850) tubulin beta-2B ch ( 445) 1265 313.5 7.3e-85 NP_006078 (OMIM: 602662) tubulin beta-4A chain iso ( 444) 1261 312.5 1.4e-84 NP_001276058 (OMIM: 602662) tubulin beta-4A chain ( 444) 1261 312.5 1.4e-84 NP_006077 (OMIM: 600638,602661,614039) tubulin bet ( 450) 1261 312.5 1.4e-84 NP_001276056 (OMIM: 602662) tubulin beta-4A chain ( 489) 1261 312.5 1.5e-84 NP_001276052 (OMIM: 602662) tubulin beta-4A chain ( 495) 1261 312.5 1.6e-84 NP_001280141 (OMIM: 156610,191130,615771) tubulin ( 464) 1239 307.2 5.8e-83 NP_817124 (OMIM: 616768,616780) tubulin beta-8 cha ( 444) 1237 306.7 7.8e-83 NP_110400 (OMIM: 612901,613112) tubulin beta-1 cha ( 451) 1191 295.7 1.7e-79 NP_001280143 (OMIM: 156610,191130,615771) tubulin ( 400) 1171 290.8 4.4e-78 XP_016883574 (OMIM: 612901,613112) PREDICTED: tubu ( 429) 1112 276.6 8.9e-74 NP_001290456 (OMIM: 615103) tubulin beta-6 chain i ( 374) 1093 272.0 1.9e-72 NP_001280145 (OMIM: 156610,191130,615771) tubulin ( 372) 1091 271.5 2.7e-72 NP_001280144 (OMIM: 156610,191130,615771) tubulin ( 372) 1091 271.5 2.7e-72 NP_001276059 (OMIM: 602662) tubulin beta-4A chain ( 372) 1072 266.9 6.3e-71 NP_001276060 (OMIM: 602662) tubulin beta-4A chain ( 372) 1072 266.9 6.3e-71 NP_001184110 (OMIM: 600638,602661,614039) tubulin ( 378) 1068 266.0 1.3e-70 XP_011517761 (OMIM: 616768,616780) PREDICTED: tubu ( 372) 1063 264.8 2.9e-70 NP_001290457 (OMIM: 615103) tubulin beta-6 chain i ( 381) 1022 254.9 2.7e-67 NP_001290455 (OMIM: 615103) tubulin beta-6 chain i ( 409) 1009 251.8 2.5e-66 NP_001297244 (OMIM: 615101,615763) tubulin beta-2A ( 360) 1005 250.8 4.5e-66 XP_016871681 (OMIM: 616768,616780) PREDICTED: tubu ( 332) 914 228.8 1.7e-59 XP_016871682 (OMIM: 616768,616780) PREDICTED: tubu ( 332) 914 228.8 1.7e-59 NP_001061 (OMIM: 191135,615412) tubulin gamma-1 ch ( 451) 829 208.4 3.2e-53 NP_057521 (OMIM: 605785) tubulin gamma-2 chain iso ( 451) 823 207.0 8.6e-53 NP_001290459 (OMIM: 615103) tubulin beta-6 chain i ( 300) 798 200.8 4e-51 NP_001290458 (OMIM: 615103) tubulin beta-6 chain i ( 300) 798 200.8 4e-51 XP_011517762 (OMIM: 616768,616780) PREDICTED: tubu ( 291) 736 185.9 1.2e-46 NP_001307438 (OMIM: 605785) tubulin gamma-2 chain ( 460) 549 140.9 6.6e-33 NP_057346 (OMIM: 607345) tubulin epsilon chain [Ho ( 475) 457 118.8 3.2e-26 XP_011522916 (OMIM: 605785) PREDICTED: tubulin gam ( 298) 438 114.1 5.2e-25 XP_016879942 (OMIM: 605785) PREDICTED: tubulin gam ( 298) 438 114.1 5.2e-25 XP_016866407 (OMIM: 607345) PREDICTED: tubulin eps ( 431) 417 109.1 2.4e-23 XP_016879944 (OMIM: 605785) PREDICTED: tubulin gam ( 274) 412 107.8 3.8e-23 XP_016879943 (OMIM: 605785) PREDICTED: tubulin gam ( 274) 412 107.8 3.8e-23 >>NP_005991 (OMIM: 191110,616208) tubulin alpha-4A chain (448 aa) initn: 3047 init1: 3047 opt: 3047 Z-score: 3965.5 bits: 743.0 E(85289): 3.8e-214 Smith-Waterman score: 3047; 100.0% identity (100.0% similar) in 448 aa overlap (1-448:1-448) 10 20 30 40 50 60 pF1KE1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFTTFFCETGAGK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_005 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFTTFFCETGAGK 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 HVPRAVFVDLEPTVIDEIRNGPYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDPVLD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_005 HVPRAVFVDLEPTVIDEIRNGPYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDPVLD 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 RIRKLSDQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_005 RIRKLSDQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_005 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_005 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAAIKTKRSIQFVDWCPTGFKVGINYQPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_005 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAAIKTKRSIQFVDWCPTGFKVGINYQPP 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE1 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_005 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 370 380 390 400 410 420 430 440 pF1KE1 AREDMAALEKDYEEVGIDSYEDEDEGEE :::::::::::::::::::::::::::: NP_005 AREDMAALEKDYEEVGIDSYEDEDEGEE 430 440 >>NP_001265481 (OMIM: 191110,616208) tubulin alpha-4A ch (433 aa) initn: 2944 init1: 2944 opt: 2944 Z-score: 3831.6 bits: 718.1 E(85289): 1.1e-206 Smith-Waterman score: 2944; 100.0% identity (100.0% similar) in 433 aa overlap (16-448:1-433) 10 20 30 40 50 60 pF1KE1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFTTFFCETGAGK ::::::::::::::::::::::::::::::::::::::::::::: NP_001 MGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFTTFFCETGAGK 10 20 30 40 70 80 90 100 110 120 pF1KE1 HVPRAVFVDLEPTVIDEIRNGPYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDPVLD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 HVPRAVFVDLEPTVIDEIRNGPYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDPVLD 50 60 70 80 90 100 130 140 150 160 170 180 pF1KE1 RIRKLSDQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 RIRKLSDQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 110 120 130 140 150 160 190 200 210 220 230 240 pF1KE1 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA 170 180 190 200 210 220 250 260 270 280 290 300 pF1KE1 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 230 240 250 260 270 280 310 320 330 340 350 360 pF1KE1 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAAIKTKRSIQFVDWCPTGFKVGINYQPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAAIKTKRSIQFVDWCPTGFKVGINYQPP 290 300 310 320 330 340 370 380 390 400 410 420 pF1KE1 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 350 360 370 380 390 400 430 440 pF1KE1 AREDMAALEKDYEEVGIDSYEDEDEGEE :::::::::::::::::::::::::::: NP_001 AREDMAALEKDYEEVGIDSYEDEDEGEE 410 420 430 >>NP_006073 (OMIM: 602530) tubulin alpha-1B chain [Homo (451 aa) initn: 2935 init1: 2935 opt: 2941 Z-score: 3827.4 bits: 717.4 E(85289): 1.9e-206 Smith-Waterman score: 2941; 96.4% identity (98.4% similar) in 450 aa overlap (1-448:1-450) 10 20 30 40 50 60 pF1KE1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFTTFFCETGAGK ::::::.::::::::.:::::::::::::::::::::::::::::::::.::: :::::: NP_006 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 HVPRAVFVDLEPTVIDEIRNGPYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDPVLD :::::::::::::::::.:.: :::::::::::::::::::::::::::::::::: ::: NP_006 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 RIRKLSDQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA :::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAAIKTKRSIQFVDWCPTGFKVGINYQPP :::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::: NP_006 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPP 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE1 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 370 380 390 400 410 420 430 440 pF1KE1 AREDMAALEKDYEEVGIDSYEDE--DEGEE ::::::::::::::::.:: : : .:::: NP_006 AREDMAALEKDYEEVGVDSVEGEGEEEGEEY 430 440 450 >>NP_006000 (OMIM: 602529,611603) tubulin alpha-1A chain (451 aa) initn: 2927 init1: 2927 opt: 2933 Z-score: 3817.0 bits: 715.5 E(85289): 7.2e-206 Smith-Waterman score: 2933; 96.0% identity (98.4% similar) in 450 aa overlap (1-448:1-450) 10 20 30 40 50 60 pF1KE1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFTTFFCETGAGK ::::::.::::::::.:::::::::::::::::::::::::::::::::.::: :::::: NP_006 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 HVPRAVFVDLEPTVIDEIRNGPYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDPVLD :::::::::::::::::.:.: :::::::::::::::::::::::::::::::::: ::: NP_006 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 RIRKLSDQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA :::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA :::::::::::::::::::::::::::::::::::::::::::::::::::.:::::::: NP_006 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAAIKTKRSIQFVDWCPTGFKVGINYQPP :::::::::::::::::::::::::::::::::.:::::.:::::::::::::::::::: NP_006 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE1 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 370 380 390 400 410 420 430 440 pF1KE1 AREDMAALEKDYEEVGIDSYEDE--DEGEE ::::::::::::::::.:: : : .:::: NP_006 AREDMAALEKDYEEVGVDSVEGEGEEEGEEY 430 440 450 >>NP_001257328 (OMIM: 602529,611603) tubulin alpha-1A ch (451 aa) initn: 2927 init1: 2927 opt: 2933 Z-score: 3817.0 bits: 715.5 E(85289): 7.2e-206 Smith-Waterman score: 2933; 96.0% identity (98.4% similar) in 450 aa overlap (1-448:1-450) 10 20 30 40 50 60 pF1KE1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFTTFFCETGAGK ::::::.::::::::.:::::::::::::::::::::::::::::::::.::: :::::: NP_001 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 HVPRAVFVDLEPTVIDEIRNGPYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDPVLD :::::::::::::::::.:.: :::::::::::::::::::::::::::::::::: ::: NP_001 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 RIRKLSDQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA :::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA :::::::::::::::::::::::::::::::::::::::::::::::::::.:::::::: NP_001 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAAIKTKRSIQFVDWCPTGFKVGINYQPP :::::::::::::::::::::::::::::::::.:::::.:::::::::::::::::::: NP_001 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE1 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 370 380 390 400 410 420 430 440 pF1KE1 AREDMAALEKDYEEVGIDSYEDE--DEGEE ::::::::::::::::.:: : : .:::: NP_001 AREDMAALEKDYEEVGVDSVEGEGEEEGEEY 430 440 450 >>NP_005992 (OMIM: 602528) tubulin alpha-3C/D chain [Hom (450 aa) initn: 2895 init1: 2895 opt: 2907 Z-score: 3783.2 bits: 709.2 E(85289): 5.5e-204 Smith-Waterman score: 2907; 94.4% identity (98.4% similar) in 449 aa overlap (1-448:1-449) 10 20 30 40 50 60 pF1KE1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFTTFFCETGAGK ::::::.::::::::.:::::::::::::::::::::::::::::::::.::: :::::: NP_005 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 HVPRAVFVDLEPTVIDEIRNGPYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDPVLD ::::::::::::::.::.:.: ::::::::::::::::::::::::::::::::.: ::: NP_005 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 RIRKLSDQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA :::::.: ::::::::.::::::::::::.:::::::::::::::::::.:::::::::: NP_005 RIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTA 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA :::::::::::::::::::::::::::::::::::::::::::::::::::.:::::::: NP_005 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_005 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAAIKTKRSIQFVDWCPTGFKVGINYQPP ::::::::::::::::.::::::::::::::::.:::::.:::::::::::::::::::: NP_005 QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE1 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_005 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 370 380 390 400 410 420 430 440 pF1KE1 AREDMAALEKDYEEVGIDSYEDE-DEGEE ::::.:::::::::::.:: : : .:::: NP_005 AREDLAALEKDYEEVGVDSVEAEAEEGEEY 430 440 450 >>NP_061816 (OMIM: 605742,613180) tubulin alpha-8 chain (449 aa) initn: 2782 init1: 2782 opt: 2782 Z-score: 3620.4 bits: 679.1 E(85289): 6.4e-195 Smith-Waterman score: 2782; 90.0% identity (96.4% similar) in 448 aa overlap (1-448:1-448) 10 20 30 40 50 60 pF1KE1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFTTFFCETGAGK :::::::::::::::.:::::::.::::::: :: . .. . . :::::::: ::: :: NP_061 MRECISVHVGQAGVQIGNACWELFCLEHGIQADGTFDAQASKINDDDSFTTFFSETGNGK 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 HVPRAVFVDLEPTVIDEIRNGPYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDPVLD ::::::..::::::.::.: : :::::::::::::::::::::::::::.::: :: ::: NP_061 HVPRAVMIDLEPTVVDEVRAGTYRQLFHPEQLITGKEDAANNYARGHYTVGKESIDLVLD 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 RIRKLSDQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA :::::.: :.::::::.:::::::::::::::::::::.::::::::::.:::::::::: NP_061 RIRKLTDACSGLQGFLIFHSFGGGTGSGFTSLLMERLSLDYGKKSKLEFAIYPAPQVSTA 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_061 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN :::::::::::::::::::::::::::::.::::.:::::::::::::::::..:::: . NP_061 SLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPIISAEKAYHEQLSVAEITSSCFEPNS 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAAIKTKRSIQFVDWCPTGFKVGINYQPP ::::::::::::::::.::::::::::::.:::::::::.:::::::::::::::::::: NP_061 QMVKCDPRHGKYMACCMLYRGDVVPKDVNVAIAAIKTKRTIQFVDWCPTGFKVGINYQPP 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE1 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_061 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 370 380 390 400 410 420 430 440 pF1KE1 AREDMAALEKDYEEVGIDSYEDEDEGEE ::::.::::::::::: ::.:.:.:::: NP_061 AREDLAALEKDYEEVGTDSFEEENEGEEF 430 440 >>NP_001257329 (OMIM: 602529,611603) tubulin alpha-1A ch (416 aa) initn: 2669 init1: 2669 opt: 2675 Z-score: 3481.5 bits: 653.3 E(85289): 3.5e-187 Smith-Waterman score: 2675; 96.1% identity (98.3% similar) in 415 aa overlap (36-448:1-415) 10 20 30 40 50 60 pF1KE1 SVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFTTFFCETGAGKHVPRA ::::::::::::::.::: ::::::::::: NP_001 MPSDKTIGGGDDSFNTFFSETGAGKHVPRA 10 20 30 70 80 90 100 110 120 pF1KE1 VFVDLEPTVIDEIRNGPYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDPVLDRIRKL ::::::::::::.:.: :::::::::::::::::::::::::::::::::: :::::::: NP_001 VFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKL 40 50 60 70 80 90 130 140 150 160 170 180 pF1KE1 SDQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPY .::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 ADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPY 100 110 120 130 140 150 190 200 210 220 230 240 pF1KE1 NSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFD ::::::::::::::::::::::::::::::::::::::::::::::.::::::::::::: NP_001 NSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFD 160 170 180 190 200 210 250 260 270 280 290 300 pF1KE1 GALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 GALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKC 220 230 240 250 260 270 310 320 330 340 350 360 pF1KE1 DPRHGKYMACCLLYRGDVVPKDVNAAIAAIKTKRSIQFVDWCPTGFKVGINYQPPTVVPG ::::::::::::::::::::::::::::.:::::.::::::::::::::::::::::::: NP_001 DPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPG 280 290 300 310 320 330 370 380 390 400 410 420 pF1KE1 GDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 GDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDM 340 350 360 370 380 390 430 440 pF1KE1 AALEKDYEEVGIDSYEDE--DEGEE :::::::::::.:: : : .:::: NP_001 AALEKDYEEVGVDSVEGEGEEEGEEY 400 410 >>NP_001180343 (OMIM: 605742,613180) tubulin alpha-8 cha (383 aa) initn: 2425 init1: 2425 opt: 2425 Z-score: 3156.4 bits: 593.0 E(85289): 4.5e-169 Smith-Waterman score: 2425; 92.7% identity (98.2% similar) in 381 aa overlap (68-448:2-382) 40 50 60 70 80 90 pF1KE1 SDKTIGGGDDSFTTFFCETGAGKHVPRAVFVDLEPTVIDEIRNGPYRQLFHPEQLITGKE .::::::.::.: : ::::::::::::::: NP_001 MIDLEPTVVDEVRAGTYRQLFHPEQLITGKE 10 20 30 100 110 120 130 140 150 pF1KE1 DAANNYARGHYTIGKEIIDPVLDRIRKLSDQCTGLQGFLVFHSFGGGTGSGFTSLLMERL ::::::::::::.::: :: ::::::::.: :.::::::.:::::::::::::::::::: NP_001 DAANNYARGHYTVGKESIDLVLDRIRKLTDACSGLQGFLIFHSFGGGTGSGFTSLLMERL 40 50 60 70 80 90 160 170 180 190 200 210 pF1KE1 SVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNL :.::::::::::.::::::::::::::::::::::::::::::::::::::::::::::: NP_001 SLDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNL 100 110 120 130 140 150 220 230 240 250 260 270 pF1KE1 DIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVIS ::::::::::::::::::::::::::::::::::::::::::::::::::::.::::.:: NP_001 DIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPIIS 160 170 180 190 200 210 280 290 300 310 320 330 pF1KE1 AEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAAIKT :::::::::::::::..:::: .::::::::::::::::.::::::::::::.::::::: NP_001 AEKAYHEQLSVAEITSSCFEPNSQMVKCDPRHGKYMACCMLYRGDVVPKDVNVAIAAIKT 220 230 240 250 260 270 340 350 360 370 380 390 pF1KE1 KRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDL ::.::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 KRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDL 280 290 300 310 320 330 400 410 420 430 440 pF1KE1 MYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGIDSYEDEDEGEE :::::::::::::::::::::::::::.::::::::::: ::.:.:.:::: NP_001 MYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGTDSFEEENEGEEF 340 350 360 370 380 >>XP_016860313 (OMIM: 191110,616208) PREDICTED: tubulin (295 aa) initn: 1977 init1: 1977 opt: 1977 Z-score: 2574.5 bits: 485.0 E(85289): 1.2e-136 Smith-Waterman score: 1977; 100.0% identity (100.0% similar) in 295 aa overlap (154-448:1-295) 130 140 150 160 170 180 pF1KE1 KLSDQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVE :::::::::::::::::::::::::::::: XP_016 MERLSVDYGKKSKLEFSIYPAPQVSTAVVE 10 20 30 190 200 210 220 230 240 pF1KE1 PYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 PYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLR 40 50 60 70 80 90 250 260 270 280 290 300 pF1KE1 FDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 FDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMV 100 110 120 130 140 150 310 320 330 340 350 360 pF1KE1 KCDPRHGKYMACCLLYRGDVVPKDVNAAIAAIKTKRSIQFVDWCPTGFKVGINYQPPTVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 KCDPRHGKYMACCLLYRGDVVPKDVNAAIAAIKTKRSIQFVDWCPTGFKVGINYQPPTVV 160 170 180 190 200 210 370 380 390 400 410 420 pF1KE1 PGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEARE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 PGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEARE 220 230 240 250 260 270 430 440 pF1KE1 DMAALEKDYEEVGIDSYEDEDEGEE ::::::::::::::::::::::::: XP_016 DMAALEKDYEEVGIDSYEDEDEGEE 280 290 448 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 23:07:02 2016 done: Sun Nov 6 23:07:04 2016 Total Scan time: 8.600 Total Display time: 0.070 Function used was FASTA [36.3.4 Apr, 2011]