FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6351, 377 aa 1>>>pF1KE6351 377 - 377 aa - 377 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.2652+/-0.000368; mu= 16.9335+/- 0.023 mean_var=63.7368+/-12.499, 0's: 0 Z-trim(113.0): 32 B-trim: 0 in 0/50 Lambda= 0.160649 statistics sampled from 22069 (22101) to 22069 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.619), E-opt: 0.2 (0.259), width: 16 Scan time: 7.350 The best scores are: opt bits E(85289) NP_110416 (OMIM: 607106) minor histocompatibility ( 377) 2453 577.3 2e-164 NP_848695 (OMIM: 607106) minor histocompatibility ( 394) 2285 538.3 1.1e-152 NP_848696 (OMIM: 607106) minor histocompatibility ( 426) 2285 538.4 1.2e-152 NP_848697 (OMIM: 607106) minor histocompatibility ( 143) 782 189.8 3.5e-48 XP_011526442 (OMIM: 608239) PREDICTED: signal pept ( 390) 208 56.9 9e-08 XP_016882508 (OMIM: 608239) PREDICTED: signal pept ( 444) 208 57.0 1e-07 XP_016882507 (OMIM: 608239) PREDICTED: signal pept ( 460) 208 57.0 1e-07 XP_016882506 (OMIM: 608239) PREDICTED: signal pept ( 461) 208 57.0 1e-07 XP_011526441 (OMIM: 608239) PREDICTED: signal pept ( 461) 208 57.0 1e-07 NP_694533 (OMIM: 608239) signal peptide peptidase- ( 592) 208 57.0 1.3e-07 NP_001070706 (OMIM: 608239) signal peptide peptida ( 511) 207 56.8 1.3e-07 XP_011526440 (OMIM: 608239) PREDICTED: signal pept ( 618) 208 57.1 1.3e-07 NP_787078 (OMIM: 608284) signal peptide peptidase- ( 684) 201 55.5 4.5e-07 NP_620584 (OMIM: 608240) signal peptide peptidase- ( 384) 180 50.5 8e-06 XP_011536227 (OMIM: 608240) PREDICTED: signal pept ( 384) 180 50.5 8e-06 XP_016878170 (OMIM: 608238) PREDICTED: signal pept ( 452) 152 44.0 0.00082 XP_016878169 (OMIM: 608238) PREDICTED: signal pept ( 470) 152 44.0 0.00085 NP_116191 (OMIM: 608238) signal peptide peptidase- ( 520) 152 44.0 0.00093 XP_005254779 (OMIM: 608238) PREDICTED: signal pept ( 538) 152 44.0 0.00096 >>NP_110416 (OMIM: 607106) minor histocompatibility anti (377 aa) initn: 2453 init1: 2453 opt: 2453 Z-score: 3072.8 bits: 577.3 E(85289): 2e-164 Smith-Waterman score: 2453; 99.7% identity (99.7% similar) in 377 aa overlap (1-377:1-377) 10 20 30 40 50 60 pF1KE6 MDSALSDPHNGSAEAGGPTNSTTRPPSTPEGIALAYGSLLLMALLPIFFGALRSVRCARG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_110 MDSALSDPHNGSAEAGGPTNSTTRPPSTPEGIALAYGSLLLMALLPIFFGALRSVRCARG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 KNASDMPETITSRDAARFPIIASCTLLGLYLFFKIFSQEYINLLLSMYFFVLGILALSHT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_110 KNASDMPETITSRDAARFPIIASCTLLGLYLFFKIFSQEYINLLLSMYFFVLGILALSHT 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 ISPFMNKFFPASFPNRQYQLLFTQGSGENKEEIINYEFDTKDLVCLGLSSIVGVWYLLRK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_110 ISPFMNKFFPASFPNRQYQLLFTQGSGENKEEIINYEFDTKDLVCLGLSSIVGVWYLLRK 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 HWIANNLFGLAFSLNGVELLHLNNVSTGCILLGGLFIYDVFWVFGTNVMVTVAKFFEAPI :::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::: NP_110 HWIANNLFGLAFSLNGVELLHLNNVSTGCILLGGLFIYDVFWVFGTNVMVTVAKSFEAPI 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE6 KLVFPQDLLEKGLEANNFAMLGLGDVVIPGIFIALLLRFDISLKKNTHTYFYTSFAAYIF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_110 KLVFPQDLLEKGLEANNFAMLGLGDVVIPGIFIALLLRFDISLKKNTHTYFYTSFAAYIF 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE6 GLGLTIFIMHIFKHAQPALLYLVPACIGFPVLVALAKGEVTEMFSYEESNPKDPAAVTES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_110 GLGLTIFIMHIFKHAQPALLYLVPACIGFPVLVALAKGEVTEMFSYEESNPKDPAAVTES 310 320 330 340 350 360 370 pF1KE6 KEGTEASASKGLEKKEK ::::::::::::::::: NP_110 KEGTEASASKGLEKKEK 370 >>NP_848695 (OMIM: 607106) minor histocompatibility anti (394 aa) initn: 2274 init1: 2274 opt: 2285 Z-score: 2862.0 bits: 538.3 E(85289): 1.1e-152 Smith-Waterman score: 2285; 93.1% identity (95.5% similar) in 379 aa overlap (1-375:1-379) 10 20 30 40 50 60 pF1KE6 MDSALSDPHNGSAEAGGPTNSTTRPPSTPEGIALAYGSLLLMALLPIFFGALRSVRCARG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_848 MDSALSDPHNGSAEAGGPTNSTTRPPSTPEGIALAYGSLLLMALLPIFFGALRSVRCARG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 KNASDMPETITSRDAARFPIIASCTLLGLYLFFKIFSQEYINLLLSMYFFVLGILALSHT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_848 KNASDMPETITSRDAARFPIIASCTLLGLYLFFKIFSQEYINLLLSMYFFVLGILALSHT 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 ISPFMNKFFPASFPNRQYQLLFTQGSGENKEEIINYEFDTKDLVCLGLSSIVGVWYLLRK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_848 ISPFMNKFFPASFPNRQYQLLFTQGSGENKEEIINYEFDTKDLVCLGLSSIVGVWYLLRK 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 HWIANNLFGLAFSLNGVELLHLNNVSTGCILLGGLFIYDVFWVFGTNVMVTVAKFFEAPI :::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::: NP_848 HWIANNLFGLAFSLNGVELLHLNNVSTGCILLGGLFIYDVFWVFGTNVMVTVAKSFEAPI 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE6 KLVFPQDLLEKGLEANNFAMLGLGDVVIPGIFIALLLRFDISLKKNTHTYFYTSFAAYIF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_848 KLVFPQDLLEKGLEANNFAMLGLGDVVIPGIFIALLLRFDISLKKNTHTYFYTSFAAYIF 250 260 270 280 290 300 310 320 330 340 350 pF1KE6 GLGLTIFIMHIFKHAQPALLYLVPACIGFPVLVALAKGEVTEMFSYEESN---PKDPAAV ::::::::::::::::::::::::::::::::::::::::::::::: : :. : . NP_848 GLGLTIFIMHIFKHAQPALLYLVPACIGFPVLVALAKGEVTEMFSYESSAEILPHTPRLT 310 320 330 340 350 360 360 370 pF1KE6 T-ESKEGTEASASKGLEKKEK . :. :: . ....: NP_848 HFPTVSGSPASLADSMQQKLAGPRRRRPQNPSAM 370 380 390 >>NP_848696 (OMIM: 607106) minor histocompatibility anti (426 aa) initn: 2274 init1: 2274 opt: 2285 Z-score: 2861.5 bits: 538.4 E(85289): 1.2e-152 Smith-Waterman score: 2285; 93.1% identity (95.5% similar) in 379 aa overlap (1-375:1-379) 10 20 30 40 50 60 pF1KE6 MDSALSDPHNGSAEAGGPTNSTTRPPSTPEGIALAYGSLLLMALLPIFFGALRSVRCARG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_848 MDSALSDPHNGSAEAGGPTNSTTRPPSTPEGIALAYGSLLLMALLPIFFGALRSVRCARG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 KNASDMPETITSRDAARFPIIASCTLLGLYLFFKIFSQEYINLLLSMYFFVLGILALSHT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_848 KNASDMPETITSRDAARFPIIASCTLLGLYLFFKIFSQEYINLLLSMYFFVLGILALSHT 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 ISPFMNKFFPASFPNRQYQLLFTQGSGENKEEIINYEFDTKDLVCLGLSSIVGVWYLLRK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_848 ISPFMNKFFPASFPNRQYQLLFTQGSGENKEEIINYEFDTKDLVCLGLSSIVGVWYLLRK 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 HWIANNLFGLAFSLNGVELLHLNNVSTGCILLGGLFIYDVFWVFGTNVMVTVAKFFEAPI :::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::: NP_848 HWIANNLFGLAFSLNGVELLHLNNVSTGCILLGGLFIYDVFWVFGTNVMVTVAKSFEAPI 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE6 KLVFPQDLLEKGLEANNFAMLGLGDVVIPGIFIALLLRFDISLKKNTHTYFYTSFAAYIF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_848 KLVFPQDLLEKGLEANNFAMLGLGDVVIPGIFIALLLRFDISLKKNTHTYFYTSFAAYIF 250 260 270 280 290 300 310 320 330 340 350 pF1KE6 GLGLTIFIMHIFKHAQPALLYLVPACIGFPVLVALAKGEVTEMFSYEESN---PKDPAAV ::::::::::::::::::::::::::::::::::::::::::::::: : :. : . NP_848 GLGLTIFIMHIFKHAQPALLYLVPACIGFPVLVALAKGEVTEMFSYESSAEILPHTPRLT 310 320 330 340 350 360 360 370 pF1KE6 T-ESKEGTEASASKGLEKKEK . :. :: . ....: NP_848 HFPTVSGSPASLADSMQQKLAGPRRRRPQNPSAIYEESNPKDPAAVTESKEGTEASASKG 370 380 390 400 410 420 >-- initn: 210 init1: 197 opt: 197 Z-score: 246.1 bits: 54.4 E(85289): 5.7e-07 Smith-Waterman score: 197; 100.0% identity (100.0% similar) in 32 aa overlap (346-377:395-426) 320 330 340 350 360 370 pF1KE6 QPALLYLVPACIGFPVLVALAKGEVTEMFSYEESNPKDPAAVTESKEGTEASASKGLEKK :::::::::::::::::::::::::::::: NP_848 VSGSPASLADSMQQKLAGPRRRRPQNPSAIYEESNPKDPAAVTESKEGTEASASKGLEKK 370 380 390 400 410 420 pF1KE6 EK :: NP_848 EK >>NP_848697 (OMIM: 607106) minor histocompatibility anti (143 aa) initn: 782 init1: 782 opt: 782 Z-score: 986.1 bits: 189.8 E(85289): 3.5e-48 Smith-Waterman score: 782; 100.0% identity (100.0% similar) in 121 aa overlap (1-121:1-121) 10 20 30 40 50 60 pF1KE6 MDSALSDPHNGSAEAGGPTNSTTRPPSTPEGIALAYGSLLLMALLPIFFGALRSVRCARG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_848 MDSALSDPHNGSAEAGGPTNSTTRPPSTPEGIALAYGSLLLMALLPIFFGALRSVRCARG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 KNASDMPETITSRDAARFPIIASCTLLGLYLFFKIFSQEYINLLLSMYFFVLGILALSHT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_848 KNASDMPETITSRDAARFPIIASCTLLGLYLFFKIFSQEYINLLLSMYFFVLGILALSHT 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 ISPFMNKFFPASFPNRQYQLLFTQGSGENKEEIINYEFDTKDLVCLGLSSIVGVWYLLRK : NP_848 IRSEGISLQHLKQLSREPVQGLG 130 140 >>XP_011526442 (OMIM: 608239) PREDICTED: signal peptide (390 aa) initn: 276 init1: 106 opt: 208 Z-score: 260.5 bits: 56.9 E(85289): 9e-08 Smith-Waterman score: 300; 25.7% identity (55.0% similar) in 300 aa overlap (80-356:28-312) 50 60 70 80 90 100 pF1KE6 GALRSVRCARGKNASDMPETITSRDAARFPIIASCTLLGL-YLFFKIFSQEYINLLLSMY .. :..: : : :. .. :.. XP_011 MKHKRDDGPEKQEDEAVDVTPVMTCVFVVMCCSMLVLLYYFYDLLVYVVIGI----- 10 20 30 40 50 110 120 130 140 150 160 pF1KE6 FFVLGILALSHTISPFMNK--FFPASFPNRQYQLLFTQGSGENKEEIINYEFDTKDLVCL : . . .: ..: . . : .:: . : . . . . .. : :. XP_011 FCLASATGLYSCLAPCVRRLPFGKCRIPNNS--LPYFHKRPQARMLLLA-------LFCV 60 70 80 90 100 170 180 190 200 210 220 pF1KE6 GLSSIVGVWYLLRK-HWIANNLFGLAFSLNGVELLHLNNVSTGCILLGGLFIYDVFWVF- ..: . ::. . :. .. .:.:: : .. ..: . .. .:: ::.::.:.:: XP_011 AVSVVWGVFRNEDQWAWVLQDALGIAFCLYMLKTIRLPTFKACTLLLLVLFLYDIFFVFI 110 120 130 140 150 160 230 240 250 260 pF1KE6 -------GTNVMVTVAK-------FFEAPIKLVFPQ-DLLEKGLEANNFAMLGLGDVVIP :...:: :: . :. : :. . .: :..::.::...: XP_011 TPFLTKSGSSIMVEVATGPSDSATREKLPMVLKVPRLNSSPLALCDRPFSLLGFGDILVP 170 180 190 200 210 220 270 280 290 300 310 320 pF1KE6 GIFIALLLRFDISLKKNTHTYFYTSFAAYIFGLGLTIFIMHIFKHAQPALLYLVPACIGF :...: ::::... ....:: . :: :: .:. . .....::::::::: . XP_011 GLLVAYCHRFDIQVQ-SSRVYFVACTIAYGVGLLVTFVALALMQRGQPALLYLVPCTLVT 230 240 250 260 270 280 330 340 350 360 370 pF1KE6 PVLVALAKGEVTEMFS---YEESNPKDPAAVTESKEGTEASASKGLEKKEK ::: . :. ... . . : .: : XP_011 SCAVALWRRELGVFWTGSGFAKVLPPSPWAPAPADGPQPPKDSATPLSPQPPSEEPATSP 290 300 310 320 330 340 >>XP_016882508 (OMIM: 608239) PREDICTED: signal peptide (444 aa) initn: 276 init1: 106 opt: 208 Z-score: 259.7 bits: 57.0 E(85289): 1e-07 Smith-Waterman score: 305; 24.3% identity (55.4% similar) in 350 aa overlap (39-356:31-366) 10 20 30 40 50 60 pF1KE6 HNGSAEAGGPTNSTTRPPSTPEGIALAYGSLLLMALLPIFFGAL----RSVRCARGKNAS ...::. . .:. :.:. .. . XP_016 MLDIFTRFGRTVRAALYAPKEPVLDYNMVIIFIMAVGTVAIGGYWAGSRDVKKYMKHKRD 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 DMPETITSRDAARFPIIASCTLLGLYLFFKIFSQEYINLLLSMYFFVLGILALSHT---- : :: .. . :.. .:... . . .. . .::. . :.::. :. . XP_016 DGPEKQEDEAVDVTPVM-TCVFVVMCCSMLVLLYYFYDLLV---YVVIGIFCLASATGLY 70 80 90 100 110 130 140 150 160 170 pF1KE6 --ISPFMNK--FFPASFPNRQYQLLFTQGSGENKEEIINYEFDTKDLVCLGLSSIVGVWY ..: . . : .:: .: . . . . .. : :...: . ::. XP_016 SCLAPCVRRLPFGKCRIPNN--SLPYFHKRPQARMLLLA-------LFCVAVSVVWGVFR 120 130 140 150 160 180 190 200 210 220 pF1KE6 LLRK-HWIANNLFGLAFSLNGVELLHLNNVSTGCILLGGLFIYDVFWVF--------GTN . :. .. .:.:: : .. ..: . .. .:: ::.::.:.:: :.. XP_016 NEDQWAWVLQDALGIAFCLYMLKTIRLPTFKACTLLLLVLFLYDIFFVFITPFLTKSGSS 170 180 190 200 210 220 230 240 250 260 270 pF1KE6 VMVTVAK-------FFEAPIKLVFPQ-DLLEKGLEANNFAMLGLGDVVIPGIFIALLLRF .:: :: . :. : :. . .: :..::.::...::...: :: XP_016 IMVEVATGPSDSATREKLPMVLKVPRLNSSPLALCDRPFSLLGFGDILVPGLLVAYCHRF 230 240 250 260 270 280 280 290 300 310 320 330 pF1KE6 DISLKKNTHTYFYTSFAAYIFGLGLTIFIMHIFKHAQPALLYLVPACIGFPVLVALAKGE ::... ....:: . :: :: .:. . .....::::::::: . ::: . : XP_016 DIQVQ-SSRVYFVACTIAYGVGLLVTFVALALMQRGQPALLYLVPCTLVTSCAVALWRRE 290 300 310 320 330 340 340 350 360 370 pF1KE6 VTEMFS---YEESNPKDPAAVTESKEGTEASASKGLEKKEK . ... . . : .: : XP_016 LGVFWTGSGFAKVLPPSPWAPAPADGPQPPKDSATPLSPQPPSEEPATSPWPAEQSPKSR 350 360 370 380 390 400 >>XP_016882507 (OMIM: 608239) PREDICTED: signal peptide (460 aa) initn: 276 init1: 106 opt: 208 Z-score: 259.4 bits: 57.0 E(85289): 1e-07 Smith-Waterman score: 305; 24.3% identity (55.4% similar) in 350 aa overlap (39-356:47-382) 10 20 30 40 50 60 pF1KE6 HNGSAEAGGPTNSTTRPPSTPEGIALAYGSLLLMALLPIFFGAL----RSVRCARGKNAS ...::. . .:. :.:. .. . XP_016 WTSSRQRFGRTVRAALYAPKEPVLDYNMVIIFIMAVGTVAIGGYWAGSRDVKKYMKHKRD 20 30 40 50 60 70 70 80 90 100 110 120 pF1KE6 DMPETITSRDAARFPIIASCTLLGLYLFFKIFSQEYINLLLSMYFFVLGILALSHT---- : :: .. . :.. .:... . . .. . .::. . :.::. :. . XP_016 DGPEKQEDEAVDVTPVM-TCVFVVMCCSMLVLLYYFYDLLV---YVVIGIFCLASATGLY 80 90 100 110 120 130 130 140 150 160 170 pF1KE6 --ISPFMNK--FFPASFPNRQYQLLFTQGSGENKEEIINYEFDTKDLVCLGLSSIVGVWY ..: . . : .:: .: . . . . .. : :...: . ::. XP_016 SCLAPCVRRLPFGKCRIPNN--SLPYFHKRPQARMLLLA-------LFCVAVSVVWGVFR 140 150 160 170 180 180 190 200 210 220 pF1KE6 LLRK-HWIANNLFGLAFSLNGVELLHLNNVSTGCILLGGLFIYDVFWVF--------GTN . :. .. .:.:: : .. ..: . .. .:: ::.::.:.:: :.. XP_016 NEDQWAWVLQDALGIAFCLYMLKTIRLPTFKACTLLLLVLFLYDIFFVFITPFLTKSGSS 190 200 210 220 230 240 230 240 250 260 270 pF1KE6 VMVTVAK-------FFEAPIKLVFPQ-DLLEKGLEANNFAMLGLGDVVIPGIFIALLLRF .:: :: . :. : :. . .: :..::.::...::...: :: XP_016 IMVEVATGPSDSATREKLPMVLKVPRLNSSPLALCDRPFSLLGFGDILVPGLLVAYCHRF 250 260 270 280 290 300 280 290 300 310 320 330 pF1KE6 DISLKKNTHTYFYTSFAAYIFGLGLTIFIMHIFKHAQPALLYLVPACIGFPVLVALAKGE ::... ....:: . :: :: .:. . .....::::::::: . ::: . : XP_016 DIQVQ-SSRVYFVACTIAYGVGLLVTFVALALMQRGQPALLYLVPCTLVTSCAVALWRRE 310 320 330 340 350 360 340 350 360 370 pF1KE6 VTEMFS---YEESNPKDPAAVTESKEGTEASASKGLEKKEK . ... . . : .: : XP_016 LGVFWTGSGFAKVLPPSPWAPAPADGPQPPKDSATPLSPQPPSEEPATSPWPAEQSPKSR 370 380 390 400 410 420 >>XP_016882506 (OMIM: 608239) PREDICTED: signal peptide (461 aa) initn: 276 init1: 106 opt: 208 Z-score: 259.4 bits: 57.0 E(85289): 1e-07 Smith-Waterman score: 301; 24.5% identity (55.3% similar) in 351 aa overlap (39-356:47-383) 10 20 30 40 50 60 pF1KE6 HNGSAEAGGPTNSTTRPPSTPEGIALAYGSLLLMALLPIFFGAL----RSVRCARGKNA- ...::. . .:. :.:. :. XP_016 WTSSRQRFGRTVRAALYAPKEPVLDYNMVIIFIMAVGTVAIGGYWAGSRDVKKRYMKHKR 20 30 40 50 60 70 70 80 90 100 110 120 pF1KE6 SDMPETITSRDAARFPIIASCTLLGLYLFFKIFSQEYINLLLSMYFFVLGILALSHT--- .: :: .. . :.. .:... . . .. . .::. . :.::. :. . XP_016 DDGPEKQEDEAVDVTPVM-TCVFVVMCCSMLVLLYYFYDLLV---YVVIGIFCLASATGL 80 90 100 110 120 130 130 140 150 160 170 pF1KE6 ---ISPFMNK--FFPASFPNRQYQLLFTQGSGENKEEIINYEFDTKDLVCLGLSSIVGVW ..: . . : .:: .: . . . . .. : :...: . ::. XP_016 YSCLAPCVRRLPFGKCRIPNN--SLPYFHKRPQARMLLLA-------LFCVAVSVVWGVF 140 150 160 170 180 180 190 200 210 220 pF1KE6 YLLRK-HWIANNLFGLAFSLNGVELLHLNNVSTGCILLGGLFIYDVFWVF--------GT . :. .. .:.:: : .. ..: . .. .:: ::.::.:.:: :. XP_016 RNEDQWAWVLQDALGIAFCLYMLKTIRLPTFKACTLLLLVLFLYDIFFVFITPFLTKSGS 190 200 210 220 230 240 230 240 250 260 270 pF1KE6 NVMVTVAK-------FFEAPIKLVFPQ-DLLEKGLEANNFAMLGLGDVVIPGIFIALLLR ..:: :: . :. : :. . .: :..::.::...::...: : XP_016 SIMVEVATGPSDSATREKLPMVLKVPRLNSSPLALCDRPFSLLGFGDILVPGLLVAYCHR 250 260 270 280 290 300 280 290 300 310 320 330 pF1KE6 FDISLKKNTHTYFYTSFAAYIFGLGLTIFIMHIFKHAQPALLYLVPACIGFPVLVALAKG :::... ....:: . :: :: .:. . .....::::::::: . ::: . XP_016 FDIQVQ-SSRVYFVACTIAYGVGLLVTFVALALMQRGQPALLYLVPCTLVTSCAVALWRR 310 320 330 340 350 360 340 350 360 370 pF1KE6 EVTEMFS---YEESNPKDPAAVTESKEGTEASASKGLEKKEK :. ... . . : .: : XP_016 ELGVFWTGSGFAKVLPPSPWAPAPADGPQPPKDSATPLSPQPPSEEPATSPWPAEQSPKS 370 380 390 400 410 420 >>XP_011526441 (OMIM: 608239) PREDICTED: signal peptide (461 aa) initn: 276 init1: 106 opt: 208 Z-score: 259.4 bits: 57.0 E(85289): 1e-07 Smith-Waterman score: 301; 24.5% identity (55.3% similar) in 351 aa overlap (39-356:47-383) 10 20 30 40 50 60 pF1KE6 HNGSAEAGGPTNSTTRPPSTPEGIALAYGSLLLMALLPIFFGAL----RSVRCARGKNA- ...::. . .:. :.:. :. XP_011 WTSSRQRFGRTVRAALYAPKEPVLDYNMVIIFIMAVGTVAIGGYWAGSRDVKKRYMKHKR 20 30 40 50 60 70 70 80 90 100 110 120 pF1KE6 SDMPETITSRDAARFPIIASCTLLGLYLFFKIFSQEYINLLLSMYFFVLGILALSHT--- .: :: .. . :.. .:... . . .. . .::. . :.::. :. . XP_011 DDGPEKQEDEAVDVTPVM-TCVFVVMCCSMLVLLYYFYDLLV---YVVIGIFCLASATGL 80 90 100 110 120 130 130 140 150 160 170 pF1KE6 ---ISPFMNK--FFPASFPNRQYQLLFTQGSGENKEEIINYEFDTKDLVCLGLSSIVGVW ..: . . : .:: .: . . . . .. : :...: . ::. XP_011 YSCLAPCVRRLPFGKCRIPNN--SLPYFHKRPQARMLLLA-------LFCVAVSVVWGVF 140 150 160 170 180 180 190 200 210 220 pF1KE6 YLLRK-HWIANNLFGLAFSLNGVELLHLNNVSTGCILLGGLFIYDVFWVF--------GT . :. .. .:.:: : .. ..: . .. .:: ::.::.:.:: :. XP_011 RNEDQWAWVLQDALGIAFCLYMLKTIRLPTFKACTLLLLVLFLYDIFFVFITPFLTKSGS 190 200 210 220 230 240 230 240 250 260 270 pF1KE6 NVMVTVAK-------FFEAPIKLVFPQ-DLLEKGLEANNFAMLGLGDVVIPGIFIALLLR ..:: :: . :. : :. . .: :..::.::...::...: : XP_011 SIMVEVATGPSDSATREKLPMVLKVPRLNSSPLALCDRPFSLLGFGDILVPGLLVAYCHR 250 260 270 280 290 300 280 290 300 310 320 330 pF1KE6 FDISLKKNTHTYFYTSFAAYIFGLGLTIFIMHIFKHAQPALLYLVPACIGFPVLVALAKG :::... ....:: . :: :: .:. . .....::::::::: . ::: . XP_011 FDIQVQ-SSRVYFVACTIAYGVGLLVTFVALALMQRGQPALLYLVPCTLVTSCAVALWRR 310 320 330 340 350 360 340 350 360 370 pF1KE6 EVTEMFS---YEESNPKDPAAVTESKEGTEASASKGLEKKEK :. ... . . : .: : XP_011 ELGVFWTGSGFAKVLPPSPWAPAPADGPQPPKDSATPLSPQPPSEEPATSPWPAEQSPKS 370 380 390 400 410 420 >>NP_694533 (OMIM: 608239) signal peptide peptidase-like (592 aa) initn: 276 init1: 106 opt: 208 Z-score: 257.8 bits: 57.0 E(85289): 1.3e-07 Smith-Waterman score: 301; 24.5% identity (55.3% similar) in 351 aa overlap (39-356:178-514) 10 20 30 40 50 60 pF1KE6 HNGSAEAGGPTNSTTRPPSTPEGIALAYGSLLLMALLPIFFGAL----RSVRCARGKNA- ...::. . .:. :.:. :. NP_694 MLDIFTRFGRTVRAALYAPKEPVLDYNMVIIFIMAVGTVAIGGYWAGSRDVKKRYMKHKR 150 160 170 180 190 200 70 80 90 100 110 120 pF1KE6 SDMPETITSRDAARFPIIASCTLLGLYLFFKIFSQEYINLLLSMYFFVLGILALSHT--- .: :: .. . :.. .:... . . .. . .::. . :.::. :. . NP_694 DDGPEKQEDEAVDVTPVM-TCVFVVMCCSMLVLLYYFYDLLV---YVVIGIFCLASATGL 210 220 230 240 250 260 130 140 150 160 170 pF1KE6 ---ISPFMNK--FFPASFPNRQYQLLFTQGSGENKEEIINYEFDTKDLVCLGLSSIVGVW ..: . . : .:: .: . . . . .. : :...: . ::. NP_694 YSCLAPCVRRLPFGKCRIPNN--SLPYFHKRPQARMLLLA-------LFCVAVSVVWGVF 270 280 290 300 310 180 190 200 210 220 pF1KE6 YLLRK-HWIANNLFGLAFSLNGVELLHLNNVSTGCILLGGLFIYDVFWVF--------GT . :. .. .:.:: : .. ..: . .. .:: ::.::.:.:: :. NP_694 RNEDQWAWVLQDALGIAFCLYMLKTIRLPTFKACTLLLLVLFLYDIFFVFITPFLTKSGS 320 330 340 350 360 370 230 240 250 260 270 pF1KE6 NVMVTVAK-------FFEAPIKLVFPQ-DLLEKGLEANNFAMLGLGDVVIPGIFIALLLR ..:: :: . :. : :. . .: :..::.::...::...: : NP_694 SIMVEVATGPSDSATREKLPMVLKVPRLNSSPLALCDRPFSLLGFGDILVPGLLVAYCHR 380 390 400 410 420 430 280 290 300 310 320 330 pF1KE6 FDISLKKNTHTYFYTSFAAYIFGLGLTIFIMHIFKHAQPALLYLVPACIGFPVLVALAKG :::... ....:: . :: :: .:. . .....::::::::: . ::: . NP_694 FDIQVQ-SSRVYFVACTIAYGVGLLVTFVALALMQRGQPALLYLVPCTLVTSCAVALWRR 440 450 460 470 480 490 340 350 360 370 pF1KE6 EVTEMFS---YEESNPKDPAAVTESKEGTEASASKGLEKKEK :. ... . . : .: : NP_694 ELGVFWTGSGFAKVLPPSPWAPAPADGPQPPKDSATPLSPQPPSEEPATSPWPAEQSPKS 500 510 520 530 540 550 377 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 12:22:44 2016 done: Tue Nov 8 12:22:45 2016 Total Scan time: 7.350 Total Display time: 0.020 Function used was FASTA [36.3.4 Apr, 2011]