Result of FASTA (ccds) for
pFN21AB7783
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7783, 457 aa
1>>>pF1KB7783 457 - 457 aa - 457 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 11.2416+/-0.00103; mu= -7.2910+/- 0.061
mean_var=437.8477+/-101.223, 0's: 0 Z-trim(116.2): 574 B-trim: 823 in 1/54
Lambda= 0.061293
statistics sampled from 16016 (16775) to 16016 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.797), E-opt: 0.2 (0.515), width: 16
Scan time: 3.650
The best scores are: opt bits E(32554)
CCDS9448.1 KLF5 gene_id:688|Hs108|chr13 ( 457) 3180 295.2 9.2e-80
CCDS66562.1 KLF5 gene_id:688|Hs108|chr13 ( 366) 2537 238.3 1e-62
CCDS3444.1 KLF3 gene_id:51274|Hs108|chr4 ( 345) 624 69.1 8.3e-12
CCDS9449.1 KLF12 gene_id:11278|Hs108|chr13 ( 402) 608 67.7 2.5e-11
CCDS14373.1 KLF8 gene_id:11279|Hs108|chrX ( 359) 591 66.2 6.4e-11
CCDS12343.1 KLF2 gene_id:10365|Hs108|chr19 ( 355) 588 65.9 7.7e-11
>>CCDS9448.1 KLF5 gene_id:688|Hs108|chr13 (457 aa)
initn: 3180 init1: 3180 opt: 3180 Z-score: 1545.5 bits: 295.2 E(32554): 9.2e-80
Smith-Waterman score: 3180; 100.0% identity (100.0% similar) in 457 aa overlap (1-457:1-457)
10 20 30 40 50 60
pF1KB7 MATRVLSMSARLGPVPQPPAPQDEPVFAQLKPVLGAANPARDAALFPGEELKHAHHRPQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS94 MATRVLSMSARLGPVPQPPAPQDEPVFAQLKPVLGAANPARDAALFPGEELKHAHHRPQA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 QPAPAQAPQPAQPPATGPRLPPEDLVQTRCEMEKYLTPQLPPVPIIPEHKKYRRDSASVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS94 QPAPAQAPQPAQPPATGPRLPPEDLVQTRCEMEKYLTPQLPPVPIIPEHKKYRRDSASVV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 DQFFTDTEGLPYSINMNVFLPDITHLRTGLYKSQRPCVTHIKTEPVAIFSHQSETTAPPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS94 DQFFTDTEGLPYSINMNVFLPDITHLRTGLYKSQRPCVTHIKTEPVAIFSHQSETTAPPP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 APTQALPEFTSIFSSHQTAAPEVNNIFIKQELPTPDLHLSVPTQQGHLYQLLNTPDLDMP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS94 APTQALPEFTSIFSSHQTAAPEVNNIFIKQELPTPDLHLSVPTQQGHLYQLLNTPDLDMP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 SSTNQTAAMDTLNVSMSAAMAGLNTHTSAVPQTAVKQFQGMPPCTYTMPSQFLPQQATYF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS94 SSTNQTAAMDTLNVSMSAAMAGLNTHTSAVPQTAVKQFQGMPPCTYTMPSQFLPQQATYF
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 PPSPPSSEPGSPDRQAEMLQNLTPPPSYAATIASKLAIHNPNLPTTLPVNSQNIQPVRYN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS94 PPSPPSSEPGSPDRQAEMLQNLTPPPSYAATIASKLAIHNPNLPTTLPVNSQNIQPVRYN
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB7 RRSNPDLEKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS94 RRSNPDLEKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDEL
370 380 390 400 410 420
430 440 450
pF1KB7 TRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQN
:::::::::::::::::::::::::::::::::::::
CCDS94 TRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQN
430 440 450
>>CCDS66562.1 KLF5 gene_id:688|Hs108|chr13 (366 aa)
initn: 2537 init1: 2537 opt: 2537 Z-score: 1239.4 bits: 238.3 E(32554): 1e-62
Smith-Waterman score: 2537; 100.0% identity (100.0% similar) in 366 aa overlap (92-457:1-366)
70 80 90 100 110 120
pF1KB7 PAPAQAPQPAQPPATGPRLPPEDLVQTRCEMEKYLTPQLPPVPIIPEHKKYRRDSASVVD
::::::::::::::::::::::::::::::
CCDS66 MEKYLTPQLPPVPIIPEHKKYRRDSASVVD
10 20 30
130 140 150 160 170 180
pF1KB7 QFFTDTEGLPYSINMNVFLPDITHLRTGLYKSQRPCVTHIKTEPVAIFSHQSETTAPPPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 QFFTDTEGLPYSINMNVFLPDITHLRTGLYKSQRPCVTHIKTEPVAIFSHQSETTAPPPA
40 50 60 70 80 90
190 200 210 220 230 240
pF1KB7 PTQALPEFTSIFSSHQTAAPEVNNIFIKQELPTPDLHLSVPTQQGHLYQLLNTPDLDMPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 PTQALPEFTSIFSSHQTAAPEVNNIFIKQELPTPDLHLSVPTQQGHLYQLLNTPDLDMPS
100 110 120 130 140 150
250 260 270 280 290 300
pF1KB7 STNQTAAMDTLNVSMSAAMAGLNTHTSAVPQTAVKQFQGMPPCTYTMPSQFLPQQATYFP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 STNQTAAMDTLNVSMSAAMAGLNTHTSAVPQTAVKQFQGMPPCTYTMPSQFLPQQATYFP
160 170 180 190 200 210
310 320 330 340 350 360
pF1KB7 PSPPSSEPGSPDRQAEMLQNLTPPPSYAATIASKLAIHNPNLPTTLPVNSQNIQPVRYNR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 PSPPSSEPGSPDRQAEMLQNLTPPPSYAATIASKLAIHNPNLPTTLPVNSQNIQPVRYNR
220 230 240 250 260 270
370 380 390 400 410 420
pF1KB7 RSNPDLEKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 RSNPDLEKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELT
280 290 300 310 320 330
430 440 450
pF1KB7 RHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQN
::::::::::::::::::::::::::::::::::::
CCDS66 RHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQN
340 350 360
>>CCDS3444.1 KLF3 gene_id:51274|Hs108|chr4 (345 aa)
initn: 615 init1: 563 opt: 624 Z-score: 325.5 bits: 69.1 E(32554): 8.3e-12
Smith-Waterman score: 641; 35.7% identity (59.7% similar) in 370 aa overlap (102-455:6-342)
80 90 100 110 120
pF1KB7 QPPATGPRLPPEDLVQTRCEMEKYLTPQLPPVPIIPEHKKYRRDSASVV--DQFFTDTEG
:::. :. : .:: .... . .
CCDS34 MLMFDPVPV----KQEAMDPVSVSYPSNYMESMKP
10 20 30
130 140 150 160 170 180
pF1KB7 LPYSINMNVFLPDITHLRTGLYKSQRPCVTHIKTEPVAIFSHQSETTAPPPAPTQALPEF
:.. ... ::. .... . :. ::: . .. ..:: : .. :
CCDS34 NKYGVIYSTPLPE------KFFQTPEGLSHGIQMEPVDLTVNKR--SSPPSAGNS--PSS
40 50 60 70 80
190 200 210 220 230 240
pF1KB7 TSIFSSHQTAAPEVNNIFIKQELPT--PDLHLSVPTQQGHLYQLLNTPDLDMPSSTNQTA
.. :::. :.: .. .:. : .. : . : : ...: :.:: ..:
CCDS34 LKFPSSHRRASPGLS-------MPSSSPPIKKYSPPSPG--VQPFGVP-LSMPPV--MAA
90 100 110 120
250 260 270 280 290 300
pF1KB7 AMDTLNVSMSAAMAGLN-THTSAVPQTAVKQFQG--MPPCTYTMP----SQFLPQQATYF
:.. .. . . .. . .. :: ....: : . : :. .: .:
CCDS34 ALSRHGIRSPGILPVIQPVVVQPVPFMYTSHLQQPLMVSLSEEMENSSSSMQVPVIESYE
130 140 150 160 170 180
310 320 330 340 350
pF1KB7 PPSPPSS---EPG-SPDRQAEMLQNLTPPPSYAATIASKLAIHNPNLPTTLPVNSQNIQP
: .. ::: :.: . ....:: ... :. . : :... .. :
CCDS34 KPISQKKIKIEPGIEPQRTDYYPEEMSPP--LMNSVSPPQALLQENHPSVIVQPGKRPLP
190 200 210 220 230 240
360 370 380 390 400 410
pF1KB7 VRYNRRSNPDLE-KRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFA
:. .:: . ::::: ::: ::.:::::::::::: :::::::::::::::: :.::
CCDS34 VE-----SPDTQRKRRIHRCDYDGCNKVYTKSSHLKAHRRTHTGEKPYKCTWEGCTWKFA
250 260 270 280 290 300
420 430 440 450
pF1KB7 RSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQN
::::::::.::::: ::::: :.:::::::::::: :::
CCDS34 RSDELTRHFRKHTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV
310 320 330 340
>>CCDS9449.1 KLF12 gene_id:11278|Hs108|chr13 (402 aa)
initn: 618 init1: 584 opt: 608 Z-score: 317.0 bits: 67.7 E(32554): 2.5e-11
Smith-Waterman score: 627; 34.5% identity (59.5% similar) in 385 aa overlap (100-455:26-399)
70 80 90 100 110 120
pF1KB7 PAQPPATGPRLPPEDLVQTRCEMEKYLTPQLPPVPIIPEHKKYRRDSASVVDQFFTDTEG
.: : . : . .. : .: . . : :.
CCDS94 MNIHMKRKTIKNINTFENRMLMLDGMPAVRVKTELLESEQGSPNVHN--YPDMEA
10 20 30 40 50
130 140 150 160 170 180
pF1KB7 LPYSINMNVFLPDITHLRTGLYKSQ-RPC---VTHIKTEPVAIFSHQSETTAPPPAP--T
.: .: : : . ...: .: ... .: :.:. : :: .: :
CCDS94 VPLLLNNVKGEPPEDSLSVDHFQTQTEPVDLSINKARTSPTAVSSSPVSMTASASSPSST
60 70 80 90 100 110
190 200 210 220 230
pF1KB7 QALPEFTSIFSSHQTAAPEVNNIFIKQELPTPDLHLSVPTQQGHLYQLLNT-----PDLD
.. .: ..: :. :.. .. . :: .. . : :.:. :.
CCDS94 STSSSSSSRLASSPTVITSVSSASSSSTVLTPGPLVASASGVGG-QQFLHIIHPVPPSSP
120 130 140 150 160 170
240 250 260 270 280 290
pF1KB7 MPSSTNQTA-------AMDTLNVSMSAAMAGLNTHTS-AVPQTAVKQFQGMPPCTYTMPS
: ..:. . ..... : ..:. . :.... .:: . .: :
CCDS94 MNLQSNKLSHVHRIPVVVQSVPVVYTAVRSPGNVNNTIVVPLLEDGRGHGKAQMD---PR
180 190 200 210 220
300 310 320 330 340
pF1KB7 QFLPQQATY------FPPSPPSS--EPGSPDRQ-AEMLQNLTPPPSYAATIASKLAIHNP
. :.:. .: .: : :: . :. .:.. : : .. . .. ..:
CCDS94 GLSPRQSKSDSDDDDLPNVTLDSVNETGSTALSIARAVQEVHPSP--VSRVRGN-RMNNQ
230 240 250 260 270 280
350 360 370 380 390 400
pF1KB7 NLPTTLPVNSQNIQPVRYNRRS-NPDLEKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGE
..: . .. .:. .: .::: .:: .::::: ::. ::.:::::::::::: ::::::
CCDS94 KFPCS--ISPFSIESTRRQRRSESPDSRKRRIHRCDFEGCNKVYTKSSHLKAHRRTHTGE
290 300 310 320 330 340
410 420 430 440 450
pF1KB7 KPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQN
:::::::::: :.::::::::::::::::.:::.:. :.:::::::::::: .::
CCDS94 KPYKCTWEGCTWKFARSDELTRHYRKHTGVKPFKCADCDRSFSRSDHLALHRRRHMLV
350 360 370 380 390 400
>>CCDS14373.1 KLF8 gene_id:11279|Hs108|chrX (359 aa)
initn: 617 init1: 555 opt: 591 Z-score: 309.5 bits: 66.2 E(32554): 6.4e-11
Smith-Waterman score: 600; 35.3% identity (58.8% similar) in 320 aa overlap (151-455:42-356)
130 140 150 160 170 180
pF1KB7 DQFFTDTEGLPYSINMNVFLPDITHLRTGLYKSQRPCVTHIKTEPVAIFSHQSETTAPPP
:.:. : . ..:. . .. ::
CCDS14 EVQLNSEGGSMQVFKQVTASVRNRDPPEIEYRSNMTSPTLLDANPMENPALFNDIKIEPP
20 30 40 50 60 70
190 200 210 220 230
pF1KB7 APTQA----LPEFTSI-FSSHQTAAPEVNNIFIKQEL--PTPDLH---LSVPTQQGHLYQ
: ::. . .: :. :: ... . : :. : : :. . .
CCDS14 EELLASDFSLPQVEPVDLSFHKPKAPLQPASMLQAPIRPPKPQSSPQTLVVSTSTSDMST
80 90 100 110 120 130
240 250 260 270 280
pF1KB7 LLNTPDLDMP----SSTNQTAAMDTLNVSMSAAMAGLNTHTSAVPQTAVKQFQGMPPCTY
: : . : .:...:.... :.: . ..: .. ... : :..:
CCDS14 SANIPTVLTPGSVLTSSQSTGSQQILHVIHTIPSVSLPNKMGGLKTIPVV-VQSLPMVYT
140 150 160 170 180 190
290 300 310 320 330 340
pF1KB7 TMPSQFLPQQATYFPPSPPSSEPGSPDRQAEMLQNLT-PPPSYAATIASKLAIHNPNLPT
:.:.. : : . ... :: . .. : : : .:: : . : .
CCDS14 TLPADGGPAAITVPLIGGDGKNAGSVKVDPTSMSPLEIPSDSEESTIESG----SSALQS
200 210 220 230 240
350 360 370 380 390 400
pF1KB7 TLPVNSQNIQPVRYNRRSNPDLEKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKC
.... .... . . ::..:::: ::. ::.:::::::::::: : :::::::::
CCDS14 LQGLQQEPAAMAQMQGEESLDLKRRRIHQCDFAGCSKVYTKSSHLKAHRRIHTGEKPYKC
250 260 270 280 290 300
410 420 430 440 450
pF1KB7 TWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQN
::.::.:.::::::::::.::::: :::.: :::::::::::.:: .::
CCDS14 TWDGCSWKFARSDELTRHFRKHTGIKPFRCTDCNRSFSRSDHLSLHRRRHDTM
310 320 330 340 350
>>CCDS12343.1 KLF2 gene_id:10365|Hs108|chr19 (355 aa)
initn: 640 init1: 525 opt: 588 Z-score: 308.1 bits: 65.9 E(32554): 7.7e-11
Smith-Waterman score: 607; 39.1% identity (59.9% similar) in 302 aa overlap (174-455:63-354)
150 160 170 180 190 200
pF1KB7 THLRTGLYKSQRPCVTHIKTEPVAIFSHQSETTAPPPAPTQALPEFTSIFSSHQTAAPEV
: ::: :. :: . :. :
CCDS12 ESGGTDDDLNSVLDFILSMGLDGLGAEAAPEPPPPPPPPAFYYPEPGAPPPYSAPAGGLV
40 50 60 70 80 90
210 220 230 240 250 260
pF1KB7 NNIFIKQELPTPDLHLSVPTQQGHLYQLLNTPDLDMPSSTNQTAAMDTLNVS--MSAAMA
... .. :: .: :. :. .:.. :: : . . .. . . . .. .
CCDS12 SEL-LRPELDAP---LG-PALHGRF--LLAPPGRLVKAEPPEADGGGGYGCAPGLTRGPR
100 110 120 130 140
270 280 290 300 310
pF1KB7 GLNTHTSAVPQTA-VKQFQGMPPCTYTMPSQFLPQQATYFP-PSPPSSEP---GSPDRQA
::. . . : .. .. : :: : . :. . .: :.: .: : :.: :
CCDS12 GLKREGAPGPAASCMRGPGGRPPPPPDTPP-LSPDGPARLPAPGPRASFPPPFGGPGFGA
150 160 170 180 190 200
320 330 340 350 360
pF1KB7 EM--LQNLTP-PPSY-----AATIASKLAIHNPN-----LPTTLPVNSQNIQPVRYNRRS
:. : ::.. ::. :. :.. : : . :.. . .: : .:::
CCDS12 PGPGLHYAPPAPPAFGLFDDAAAAAAALGLAPPAARGLLTPPASPLELLEAKPKR-GRRS
210 220 230 240 250 260
370 380 390 400 410 420
pF1KB7 NPDLEKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRH
: .. : :.: :: :.::::::::::::::::::::.:.:.:: :.::::::::::
CCDS12 WPR-KRTATHTCSYAGCGKTYTKSSHLKAHLRTHTGEKPYHCNWDGCGWKFARSDELTRH
270 280 290 300 310 320
430 440 450
pF1KB7 YRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQN
:::::: .:::: .:.:.::::::::::::::
CCDS12 YRKHTGHRPFQCHLCDRAFSRSDHLALHMKRHM
330 340 350
457 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 23:12:26 2016 done: Sun Nov 6 23:12:26 2016
Total Scan time: 3.650 Total Display time: 0.040
Function used was FASTA [36.3.4 Apr, 2011]