FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE4338, 350 aa 1>>>pF1KE4338 350 - 350 aa - 350 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.7955+/-0.000785; mu= 17.0471+/- 0.048 mean_var=132.5971+/-25.002, 0's: 0 Z-trim(113.5): 22 B-trim: 0 in 0/52 Lambda= 0.111380 statistics sampled from 14140 (14157) to 14140 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.781), E-opt: 0.2 (0.435), width: 16 Scan time: 2.780 The best scores are: opt bits E(32554) CCDS7808.1 DKK3 gene_id:27122|Hs108|chr11 ( 350) 2415 398.8 3.5e-111 CCDS81555.1 DKK3 gene_id:27122|Hs108|chr11 ( 364) 1953 324.6 8.1e-89 >>CCDS7808.1 DKK3 gene_id:27122|Hs108|chr11 (350 aa) initn: 2415 init1: 2415 opt: 2415 Z-score: 2109.5 bits: 398.8 E(32554): 3.5e-111 Smith-Waterman score: 2415; 99.7% identity (99.7% similar) in 350 aa overlap (1-350:1-350) 10 20 30 40 50 60 pF1KE4 MQRLGATLLCLLLAAAVPTAPAPAPTATSAPVKPGPALSYPQEEATLNEMFREVEELMED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS78 MQRLGATLLCLLLAAAVPTAPAPAPTATSAPVKPGPALSYPQEEATLNEMFREVEELMED 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 TQHKLRSAVEEMEAEEAAAKASSEVNLANLPPSYHNETNTDTKVGNNTIHVHREIHKITN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS78 TQHKLRSAVEEMEAEEAAAKASSEVNLANLPPSYHNETNTDTKVGNNTIHVHREIHKITN 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 NQTGQMVFSETVITSVGDEEGRRSHECIIDEDCGPSMYCQFASFQYTCQPCRGQRMLCTR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS78 NQTGQMVFSETVITSVGDEEGRRSHECIIDEDCGPSMYCQFASFQYTCQPCRGQRMLCTR 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 DSECCGDQLCVWGHCTKMATRGSNGTICDNQRDCQPGLCCAFQRGLLFPVCTPLPVEGEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS78 DSECCGDQLCVWGHCTKMATRGSNGTICDNQRDCQPGLCCAFQRGLLFPVCTPLPVEGEL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 CHDPASRLLDLITWELEPDGALDRCPCASGLLCQPHSHSLVYVCKPTFVGSRDQDGEILL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS78 CHDPASRLLDLITWELEPDGALDRCPCASGLLCQPHSHSLVYVCKPTFVGSRDQDGEILL 250 260 270 280 290 300 310 320 330 340 350 pF1KE4 PREVPDEYEVGSFMEEVRQELEDLERSLTEEMALGEPAAAAAALLGGEEI :::::::::::::::::::::::::::::::::: ::::::::::::::: CCDS78 PREVPDEYEVGSFMEEVRQELEDLERSLTEEMALREPAAAAAALLGGEEI 310 320 330 340 350 >>CCDS81555.1 DKK3 gene_id:27122|Hs108|chr11 (364 aa) initn: 2401 init1: 1950 opt: 1953 Z-score: 1708.0 bits: 324.6 E(32554): 8.1e-89 Smith-Waterman score: 2377; 95.9% identity (95.9% similar) in 364 aa overlap (1-350:1-364) 10 20 30 40 50 60 pF1KE4 MQRLGATLLCLLLAAAVPTAPAPAPTATSAPVKPGPALSYPQEEATLNEMFREVEELMED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 MQRLGATLLCLLLAAAVPTAPAPAPTATSAPVKPGPALSYPQEEATLNEMFREVEELMED 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 TQHKLRSAVEEMEAEEAAAKASSEVNLANLPPSYHNETNTDTKVGNNTIHVHREIHKITN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 TQHKLRSAVEEMEAEEAAAKASSEVNLANLPPSYHNETNTDTKVGNNTIHVHREIHKITN 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 NQTGQMVFSETVITSVGDEEGRRSHECIIDEDCGPSMYCQFASFQYTCQPCRGQRMLCTR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 NQTGQMVFSETVITSVGDEEGRRSHECIIDEDCGPSMYCQFASFQYTCQPCRGQRMLCTR 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 DSECCGDQLCVWGHCTKMATRGSNGTICDNQRDCQPGLCCAFQRGLLFPVCTPLPVEGEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 DSECCGDQLCVWGHCTKMATRGSNGTICDNQRDCQPGLCCAFQRGLLFPVCTPLPVEGEL 190 200 210 220 230 240 250 260 270 280 pF1KE4 CHDPASRLLDLITWELEPDGALDRCPCASGLLCQPH--------------SHSLVYVCKP :::::::::::::::::::::::::::::::::::: :::::::::: CCDS81 CHDPASRLLDLITWELEPDGALDRCPCASGLLCQPHRLPRLEPGFVPSLPSHSLVYVCKP 250 260 270 280 290 300 290 300 310 320 330 340 pF1KE4 TFVGSRDQDGEILLPREVPDEYEVGSFMEEVRQELEDLERSLTEEMALGEPAAAAAALLG :::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::: CCDS81 TFVGSRDQDGEILLPREVPDEYEVGSFMEEVRQELEDLERSLTEEMALREPAAAAAALLG 310 320 330 340 350 360 350 pF1KE4 GEEI :::: CCDS81 GEEI 350 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 09:15:07 2016 done: Sun Nov 6 09:15:08 2016 Total Scan time: 2.780 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]