FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE2386, 133 aa 1>>>pF1KE2386 133 - 133 aa - 133 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.1774+/-0.000965; mu= 11.0514+/- 0.058 mean_var=54.1439+/-11.012, 0's: 0 Z-trim(103.0): 25 B-trim: 296 in 1/48 Lambda= 0.174301 statistics sampled from 7192 (7214) to 7192 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.605), E-opt: 0.2 (0.222), width: 16 Scan time: 1.520 The best scores are: opt bits E(32554) CCDS342.1 FABP3 gene_id:2170|Hs108|chr1 ( 133) 848 221.2 1.5e-58 CCDS5127.1 FABP7 gene_id:2173|Hs108|chr6 ( 132) 599 158.6 1e-39 CCDS6230.1 FABP4 gene_id:2167|Hs108|chr8 ( 132) 563 149.5 5.5e-37 CCDS6229.1 PMP2 gene_id:5375|Hs108|chr8 ( 132) 559 148.5 1.1e-36 CCDS83121.1 FABP7 gene_id:2173|Hs108|chr6 ( 166) 549 146.1 7.8e-36 CCDS47882.1 FABP12 gene_id:646486|Hs108|chr8 ( 140) 480 128.7 1.1e-30 CCDS6228.1 FABP5 gene_id:2171|Hs108|chr8 ( 135) 438 118.1 1.6e-27 CCDS1152.1 CRABP2 gene_id:1382|Hs108|chr1 ( 138) 335 92.2 1e-19 CCDS3109.1 RBP2 gene_id:5948|Hs108|chr3 ( 134) 330 91.0 2.4e-19 CCDS10301.1 CRABP1 gene_id:1381|Hs108|chr15 ( 137) 325 89.7 5.9e-19 CCDS109.1 RBP7 gene_id:116362|Hs108|chr1 ( 134) 319 88.2 1.6e-18 CCDS3110.2 RBP1 gene_id:5947|Hs108|chr3 ( 197) 272 76.4 8.4e-15 CCDS8574.1 RBP5 gene_id:83758|Hs108|chr12 ( 135) 270 75.9 8.5e-15 CCDS3712.1 FABP2 gene_id:2169|Hs108|chr4 ( 132) 269 75.6 9.9e-15 CCDS46925.1 RBP1 gene_id:5947|Hs108|chr3 ( 153) 222 63.8 4.1e-11 CCDS46926.1 RBP1 gene_id:5947|Hs108|chr3 ( 157) 220 63.3 5.9e-11 >>CCDS342.1 FABP3 gene_id:2170|Hs108|chr1 (133 aa) initn: 848 init1: 848 opt: 848 Z-score: 1164.8 bits: 221.2 E(32554): 1.5e-58 Smith-Waterman score: 848; 100.0% identity (100.0% similar) in 133 aa overlap (1-133:1-133) 10 20 30 40 50 60 pF1KE2 MVDAFLGTWKLVDSKNFDDYMKSLGVGFATRQVASMTKPTTIIEKNGDILTLKTHSTFKN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 MVDAFLGTWKLVDSKNFDDYMKSLGVGFATRQVASMTKPTTIIEKNGDILTLKTHSTFKN 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 TEISFKLGVEFDETTADDRKVKSIVTLDGGKLVHLQKWDGQETTLVRELIDGKLILTLTH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 TEISFKLGVEFDETTADDRKVKSIVTLDGGKLVHLQKWDGQETTLVRELIDGKLILTLTH 70 80 90 100 110 120 130 pF1KE2 GTAVCTRTYEKEA ::::::::::::: CCDS34 GTAVCTRTYEKEA 130 >>CCDS5127.1 FABP7 gene_id:2173|Hs108|chr6 (132 aa) initn: 599 init1: 599 opt: 599 Z-score: 826.4 bits: 158.6 E(32554): 1e-39 Smith-Waterman score: 599; 67.2% identity (90.8% similar) in 131 aa overlap (1-131:1-131) 10 20 30 40 50 60 pF1KE2 MVDAFLGTWKLVDSKNFDDYMKSLGVGFATRQVASMTKPTTIIEKNGDILTLKTHSTFKN ::.:: .::::..:.:::.:::.::::::::::...::::.:: ..:: ....: ::::: CCDS51 MVEAFCATWKLTNSQNFDEYMKALGVGFATRQVGNVTKPTVIISQEGDKVVIRTLSTFKN 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 TEISFKLGVEFDETTADDRKVKSIVTLDGGKLVHLQKWDGQETTLVRELIDGKLILTLTH :::::.:: ::::::::::. ::.:.::: ::::.:::::.::..:::. :::...::: CCDS51 TEISFQLGEEFDETTADDRNCKSVVSLDGDKLVHIQKWDGKETNFVREIKDGKMVMTLTF 70 80 90 100 110 120 130 pF1KE2 GTAVCTRTYEKEA : .: .: ::: CCDS51 GDVVAVRHYEKA 130 >>CCDS6230.1 FABP4 gene_id:2167|Hs108|chr8 (132 aa) initn: 557 init1: 557 opt: 563 Z-score: 777.5 bits: 149.5 E(32554): 5.5e-37 Smith-Waterman score: 563; 64.9% identity (84.7% similar) in 131 aa overlap (1-131:1-131) 10 20 30 40 50 60 pF1KE2 MVDAFLGTWKLVDSKNFDDYMKSLGVGFATRQVASMTKPTTIIEKNGDILTLKTHSTFKN : :::.::::::.:.::::::: .:::::::.::.:.::. :: :::..:.:..::::: CCDS62 MCDAFVGTWKLVSSENFDDYMKEVGVGFATRKVAGMAKPNMIISVNGDVITIKSESTFKN 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 TEISFKLGVEFDETTADDRKVKSIVTLDGGKLVHLQKWDGQETTLVRELIDGKLILTLTH ::::: :: ::::.::::::::: .::::: :::.:::::. ::. :. : ::.. . CCDS62 TEISFILGQEFDEVTADDRKVKSTITLDGGVLVHVQKWDGKSTTIKRKREDDKLVVECVM 70 80 90 100 110 120 130 pF1KE2 GTAVCTRTYEKEA .. ::.::. CCDS62 KGVTSTRVYERA 130 >>CCDS6229.1 PMP2 gene_id:5375|Hs108|chr8 (132 aa) initn: 559 init1: 559 opt: 559 Z-score: 772.1 bits: 148.5 E(32554): 1.1e-36 Smith-Waterman score: 559; 63.4% identity (88.5% similar) in 131 aa overlap (1-131:1-131) 10 20 30 40 50 60 pF1KE2 MVDAFLGTWKLVDSKNFDDYMKSLGVGFATRQVASMTKPTTIIEKNGDILTLKTHSTFKN : . ::::::::.:.:::::::.::::.:::......:::.:: :.:::.:..:.::::: CCDS62 MSNKFLGTWKLVSSENFDDYMKALGVGLATRKLGNLAKPTVIISKKGDIITIRTESTFKN 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 TEISFKLGVEFDETTADDRKVKSIVTLDGGKLVHLQKWDGQETTLVRELIDGKLILTLTH :::::::: ::.:::::.::.::::::. :.: ..:.:::.:::. :.:..::.. CCDS62 TEISFKLGQEFEETTADNRKTKSIVTLQRGSLNQVQRWDGKETTIKRKLVNGKMVAECKM 70 80 90 100 110 120 130 pF1KE2 GTAVCTRTYEKEA .:::: ::: CCDS62 KGVVCTRIYEKV 130 >>CCDS83121.1 FABP7 gene_id:2173|Hs108|chr6 (166 aa) initn: 549 init1: 549 opt: 549 Z-score: 756.9 bits: 146.1 E(32554): 7.8e-36 Smith-Waterman score: 549; 68.1% identity (93.1% similar) in 116 aa overlap (1-116:1-116) 10 20 30 40 50 60 pF1KE2 MVDAFLGTWKLVDSKNFDDYMKSLGVGFATRQVASMTKPTTIIEKNGDILTLKTHSTFKN ::.:: .::::..:.:::.:::.::::::::::...::::.:: ..:: ....: ::::: CCDS83 MVEAFCATWKLTNSQNFDEYMKALGVGFATRQVGNVTKPTVIISQEGDKVVIRTLSTFKN 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 TEISFKLGVEFDETTADDRKVKSIVTLDGGKLVHLQKWDGQETTLVRELIDGKLILTLTH :::::.:: ::::::::::. ::.:.::: ::::.:::::.::..:::. :::... CCDS83 TEISFQLGEEFDETTADDRNCKSVVSLDGDKLVHIQKWDGKETNFVREIKDGKMVMVSND 70 80 90 100 110 120 130 pF1KE2 GTAVCTRTYEKEA CCDS83 NSPFFLVFFSSPHTSHLLPSSSLLLPFFLLPSFFNNTSLARFFNYM 130 140 150 160 >>CCDS47882.1 FABP12 gene_id:646486|Hs108|chr8 (140 aa) initn: 480 init1: 480 opt: 480 Z-score: 664.3 bits: 128.7 E(32554): 1.1e-30 Smith-Waterman score: 480; 51.9% identity (81.7% similar) in 131 aa overlap (1-131:1-131) 10 20 30 40 50 60 pF1KE2 MVDAFLGTWKLVDSKNFDDYMKSLGVGFATRQVASMTKPTTIIEKNGDILTLKTHSTFKN :.: . :::: .. .: .:::: ::.: :.:... ..:::. : .::..:.::.: ::: CCDS47 MIDQLQGTWKSISCENSEDYMKELGIGRASRKLGRLAKPTVTISTDGDVITIKTKSIFKN 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 TEISFKLGVEFDETTADDRKVKSIVTLDGGKLVHLQKWDGQETTLVRELIDGKLILTLTH .::::::: ::.: : .:.:: :::: .:...: :::.:::..:.:.:::... : CCDS47 NEISFKLGEEFEEITPGGHKTKSKVTLDKESLIQVQDWDGKETTITRKLVDGKMVVESTV 70 80 90 100 110 120 130 pF1KE2 GTAVCTRTYEKEA ....::::::: CCDS47 NSVICTRTYEKVSSNSVSNS 130 140 >>CCDS6228.1 FABP5 gene_id:2171|Hs108|chr8 (135 aa) initn: 438 init1: 438 opt: 438 Z-score: 607.5 bits: 118.1 E(32554): 1.6e-27 Smith-Waterman score: 438; 50.0% identity (80.8% similar) in 130 aa overlap (2-131:4-133) 10 20 30 40 50 pF1KE2 MVDAFLGTWKLVDSKNFDDYMKSLGVGFATRQVASMTKPTTIIEKNGDILTLKTHSTF :. . : :.:::::.::.::: ::::.: :....:.:: :: .: ::.::.::. CCDS62 MATVQQLEGRWRLVDSKGFDEYMKELGVGIALRKMGAMAKPDCIITCDGKNLTIKTESTL 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE2 KNTEISFKLGVEFDETTADDRKVKSIVTLDGGKLVHLQKWDGQETTLVRELIDGKLILTL :.:..: :: .:.::::: ::.... .. : ::. :.:::.:.:..:.: ::::.. CCDS62 KTTQFSCTLGEKFEETTADGRKTQTVCNFTDGALVQHQEWDGKESTITRKLKDGKLVVEC 70 80 90 100 110 120 120 130 pF1KE2 THGTAVCTRTYEKEA . ....::: ::: CCDS62 VMNNVTCTRIYEKVE 130 >>CCDS1152.1 CRABP2 gene_id:1382|Hs108|chr1 (138 aa) initn: 325 init1: 160 opt: 335 Z-score: 467.3 bits: 92.2 E(32554): 1e-19 Smith-Waterman score: 335; 43.7% identity (73.3% similar) in 135 aa overlap (5-132:4-138) 10 20 30 40 50 pF1KE2 MVDAFLGTWKLVDSKNFDDYMKSLGVGFATRQ--VASMTKPTTIIEKNGDILTLKTHSTF : :.::.. :.::.. .: :::. :. ::. .::.. :...:: . .:: .: CCDS11 MPNFSGNWKIIRSENFEELLKVLGVNVMLRKIAVAAASKPAVEIKQEGDTFYIKTSTTV 10 20 30 40 50 60 70 80 90 100 110 pF1KE2 KNTEISFKLGVEFDETTADDRKVKSIVTLDG-GKLV---HLQKWDGQETTLVRELI-DGK ..:::.::.: ::.: :.: : ::.: .. .:.: .: : .: .:. .::: ::. CCDS11 RTTEINFKVGEEFEEQTVDGRPCKSLVKWESENKMVCEQKLLKGEGPKTSWTRELTNDGE 60 70 80 90 100 110 120 130 pF1KE2 LILTLTHGTAVCTRTYEKEA ::::.: .::::.: .: CCDS11 LILTMTADDVVCTRVYVRE 120 130 >>CCDS3109.1 RBP2 gene_id:5948|Hs108|chr3 (134 aa) initn: 306 init1: 229 opt: 330 Z-score: 460.7 bits: 91.0 E(32554): 2.4e-19 Smith-Waterman score: 330; 42.6% identity (71.3% similar) in 129 aa overlap (7-132:7-134) 10 20 30 40 50 60 pF1KE2 MVDAFLGTWKLVDSKNFDDYMKSLGVGFATRQVASMTKPTTIIEKNGDILTLKTHSTFKN :::.. ...::. :::.: . ::::..: : .:...:: . :: :::.: CCDS31 MTRDQNGTWEMESNENFEGYMKALDIDFATRKIAVRLTQTKVIDQDGDNFKTKTTSTFRN 10 20 30 40 50 60 70 80 90 100 110 pF1KE2 TEISFKLGVEFDETTA--DDRKVKSIVTLDGGKLVHLQKWDGQETTLVRELIDG-KLILT ...: .:::::: : :.:.::..:: .: :: .:: . .:. .. :.: :: : CCDS31 YDVDFTVGVEFDEYTKSLDNRHVKALVTWEGDVLVCVQKGE-KENRGWKQWIEGDKLYLE 70 80 90 100 110 120 130 pF1KE2 LTHGTAVCTRTYEKEA :: : :: ....:. CCDS31 LTCGDQVCRQVFKKK 120 130 >>CCDS10301.1 CRABP1 gene_id:1381|Hs108|chr15 (137 aa) initn: 330 init1: 152 opt: 325 Z-score: 453.8 bits: 89.7 E(32554): 5.9e-19 Smith-Waterman score: 325; 41.8% identity (70.1% similar) in 134 aa overlap (5-132:4-137) 10 20 30 40 50 pF1KE2 MVDAFLGTWKLVDSKNFDDYMKSLGVGFATRQVA--SMTKPTTIIEKNGDILTLKTHSTF : ::::. .:.:::. .:.:::. :.:: . .:: . :...:: . .:: .: CCDS10 MPNFAGTWKMRSSENFDELLKALGVNAMLRKVAVAAASKPHVEIRQDGDQFYIKTSTTV 10 20 30 40 50 60 70 80 90 100 110 pF1KE2 KNTEISFKLGVEFDETTADDRKVKSIVTLDGGKLVH----LQKWDGQETTLVRELIDGKL ..:::.::.: :.: :.: :: .:..: .. . .: : . :: .: .::: . .: CCDS10 RTTEINFKVGEGFEEETVDGRKCRSLATWENENKIHCTQTLLEGDGPKTYWTRELANDEL 60 70 80 90 100 110 120 130 pF1KE2 ILTLTHGTAVCTRTYEKEA :::. .:::: : .: CCDS10 ILTFGADDVVCTRIYVRE 120 130 133 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 23:14:42 2016 done: Sun Nov 6 23:14:42 2016 Total Scan time: 1.520 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]