FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE4481, 498 aa 1>>>pF1KE4481 498 - 498 aa - 498 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.8691+/-0.000947; mu= 11.1738+/- 0.057 mean_var=110.8758+/-22.080, 0's: 0 Z-trim(107.2): 19 B-trim: 0 in 0/52 Lambda= 0.121802 statistics sampled from 9396 (9405) to 9396 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.658), E-opt: 0.2 (0.289), width: 16 Scan time: 2.640 The best scores are: opt bits E(32554) CCDS7109.1 NMT2 gene_id:9397|Hs108|chr10 ( 498) 3343 598.5 5.4e-171 CCDS76284.1 NMT2 gene_id:9397|Hs108|chr10 ( 485) 2814 505.6 5.1e-143 CCDS11494.1 NMT1 gene_id:4836|Hs108|chr17 ( 496) 2450 441.6 9.3e-124 >>CCDS7109.1 NMT2 gene_id:9397|Hs108|chr10 (498 aa) initn: 3343 init1: 3343 opt: 3343 Z-score: 3183.4 bits: 598.5 E(32554): 5.4e-171 Smith-Waterman score: 3343; 99.8% identity (100.0% similar) in 498 aa overlap (1-498:1-498) 10 20 30 40 50 60 pF1KE4 MAEDSESAASQQSLELDDQDTCGIDGDNEEETEHAKGSPGGYLGAKKKKKKQKRKKEKPN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS71 MAEDSESAASQQSLELDDQDTCGIDGDNEEETEHAKGSPGGYLGAKKKKKKQKRKKEKPN 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 SGGTKSDSASDSQEIKIQQPSKNPSVPMQKLQDIQRAMELLSACQGPARNIDEAAKHRYQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS71 SGGTKSDSASDSQEIKIQQPSKNPSVPMQKLQDIQRAMELLSACQGPARNIDEAAKHRYQ 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 FWDTQPVPKLDEVITSHGAIEPDKDNVRQEPYSLPQGFMWDTLDLSDAEVLKELYTLLNE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS71 FWDTQPVPKLDEVITSHGAIEPDKDNVRQEPYSLPQGFMWDTLDLSDAEVLKELYTLLNE 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 NYVEDDDNMFRFDYSPEFLLWALRPPGWLLQWHCGVRVSSNKKLVGFISAIPANIRIYDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS71 NYVEDDDNMFRFDYSPEFLLWALRPPGWLLQWHCGVRVSSNKKLVGFISAIPANIRIYDS 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 VKKMVEINFLCVHKKLRSKRVAPVLIREITRRVNLEGIFQAVYTAGVVLPKPIATCRYWH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS71 VKKMVEINFLCVHKKLRSKRVAPVLIREITRRVNLEGIFQAVYTAGVVLPKPIATCRYWH 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE4 RSLNPKKLVEVKFSHLSRNMTLQRTMKLYRLPDVTKTSGLRPMEPKDIKSVRELINTYLK :::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS71 RSLNPRKLVEVKFSHLSRNMTLQRTMKLYRLPDVTKTSGLRPMEPKDIKSVRELINTYLK 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE4 QFHLAPVMDEEEVAHWFLPREHIIDTFVVESPNGKLTDFLSFYTLPSTVMHHPAHKSLKA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS71 QFHLAPVMDEEEVAHWFLPREHIIDTFVVESPNGKLTDFLSFYTLPSTVMHHPAHKSLKA 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE4 AYSFYNIHTETPLLDLMSDALILAKSKGFDVFNALDLMENKTFLEKLKFGIGDGNLQYYL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS71 AYSFYNIHTETPLLDLMSDALILAKSKGFDVFNALDLMENKTFLEKLKFGIGDGNLQYYL 430 440 450 460 470 480 490 pF1KE4 YNWRCPGTDSEKVGLVLQ :::::::::::::::::: CCDS71 YNWRCPGTDSEKVGLVLQ 490 >>CCDS76284.1 NMT2 gene_id:9397|Hs108|chr10 (485 aa) initn: 2809 init1: 2809 opt: 2814 Z-score: 2681.2 bits: 505.6 E(32554): 5.1e-143 Smith-Waterman score: 2820; 90.6% identity (95.1% similar) in 467 aa overlap (46-498:21-485) 20 30 40 50 60 pF1KE4 LDDQDTCGIDGDNEEETEHAKGSPGGYLGAKKKKKKQKRKKEKPNS-------------- :......::... :.. CCDS76 MRRRRSTPKEVLEGIWEPKRKRRNRREKRRNQIPEAPSQTRHLIPRRLKF 10 20 30 40 50 70 80 90 100 110 120 pF1KE4 GGTKSDSASDSQEIKIQQPSKNPSVPMQKLQDIQRAMELLSACQGPARNIDEAAKHRYQF .. .. . : :. .. .:: ::::::::::::::::::::::::::::::::::::::: CCDS76 SSLRNTTPSGSR-FQREQP-WNPSVPMQKLQDIQRAMELLSACQGPARNIDEAAKHRYQF 60 70 80 90 100 130 140 150 160 170 180 pF1KE4 WDTQPVPKLDEVITSHGAIEPDKDNVRQEPYSLPQGFMWDTLDLSDAEVLKELYTLLNEN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 WDTQPVPKLDEVITSHGAIEPDKDNVRQEPYSLPQGFMWDTLDLSDAEVLKELYTLLNEN 110 120 130 140 150 160 190 200 210 220 230 240 pF1KE4 YVEDDDNMFRFDYSPEFLLWALRPPGWLLQWHCGVRVSSNKKLVGFISAIPANIRIYDSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 YVEDDDNMFRFDYSPEFLLWALRPPGWLLQWHCGVRVSSNKKLVGFISAIPANIRIYDSV 170 180 190 200 210 220 250 260 270 280 290 300 pF1KE4 KKMVEINFLCVHKKLRSKRVAPVLIREITRRVNLEGIFQAVYTAGVVLPKPIATCRYWHR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 KKMVEINFLCVHKKLRSKRVAPVLIREITRRVNLEGIFQAVYTAGVVLPKPIATCRYWHR 230 240 250 260 270 280 310 320 330 340 350 360 pF1KE4 SLNPKKLVEVKFSHLSRNMTLQRTMKLYRLPDVTKTSGLRPMEPKDIKSVRELINTYLKQ ::::.::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 SLNPRKLVEVKFSHLSRNMTLQRTMKLYRLPDVTKTSGLRPMEPKDIKSVRELINTYLKQ 290 300 310 320 330 340 370 380 390 400 410 420 pF1KE4 FHLAPVMDEEEVAHWFLPREHIIDTFVVESPNGKLTDFLSFYTLPSTVMHHPAHKSLKAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 FHLAPVMDEEEVAHWFLPREHIIDTFVVESPNGKLTDFLSFYTLPSTVMHHPAHKSLKAA 350 360 370 380 390 400 430 440 450 460 470 480 pF1KE4 YSFYNIHTETPLLDLMSDALILAKSKGFDVFNALDLMENKTFLEKLKFGIGDGNLQYYLY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 YSFYNIHTETPLLDLMSDALILAKSKGFDVFNALDLMENKTFLEKLKFGIGDGNLQYYLY 410 420 430 440 450 460 490 pF1KE4 NWRCPGTDSEKVGLVLQ ::::::::::::::::: CCDS76 NWRCPGTDSEKVGLVLQ 470 480 >>CCDS11494.1 NMT1 gene_id:4836|Hs108|chr17 (496 aa) initn: 2569 init1: 2383 opt: 2450 Z-score: 2335.3 bits: 441.6 E(32554): 9.3e-124 Smith-Waterman score: 2515; 73.0% identity (88.6% similar) in 508 aa overlap (1-498:1-496) 10 20 30 40 50 pF1KE4 MAEDSESAASQQSLEL--------DDQDTCGIDGDNEEETEHAKG--SPGGYLGAKKKKK ::..::.:.. . : . .. :. : .:::.. . .: ::.. ::::::: CCDS11 MADESETAVKPPAPPLPQMMEGNGNGHEHCS-DCENEEDNSYNRGGLSPANDTGAKKKKK 10 20 30 40 50 60 70 80 90 100 110 pF1KE4 KQKRKKEKPNSGGTKSDSASDSQEIKIQQPSKNPSVPMQKLQDIQRAMELLSACQGPARN :::.:::: :...:::.: :: : :.: ...:.::.:.::.:. ::::.. CCDS11 KQKKKKEK----GSETDSAQD-------QPVKMNSLPAERIQEIQKAIELFSVGQGPAKT 60 70 80 90 100 120 130 140 150 160 170 pF1KE4 IDEAAKHRYQFWDTQPVPKLDEVITSHGAIEPDKDNVRQEPYSLPQGFMWDTLDLSDAEV ..::.:. :::::::::::: ::...:: .::::::.:::::.::::: ::.:::.: : CCDS11 MEEASKRSYQFWDTQPVPKLGEVVNTHGPVEPDKDNIRQEPYTLPQGFTWDALDLGDRGV 110 120 130 140 150 160 180 190 200 210 220 230 pF1KE4 LKELYTLLNENYVEDDDNMFRFDYSPEFLLWALRPPGWLLQWHCGVRVSSNKKLVGFISA ::::::::::::::::::::::::::::::::::::::: :::::::: :..:::::::: CCDS11 LKELYTLLNENYVEDDDNMFRFDYSPEFLLWALRPPGWLPQWHCGVRVVSSRKLVGFISA 170 180 190 200 210 220 240 250 260 270 280 290 pF1KE4 IPANIRIYDSVKKMVEINFLCVHKKLRSKRVAPVLIREITRRVNLEGIFQAVYTAGVVLP :::::.:::. ::::::::::::::::::::::::::::::::.:::::::::::::::: CCDS11 IPANIHIYDTEKKMVEINFLCVHKKLRSKRVAPVLIREITRRVHLEGIFQAVYTAGVVLP 230 240 250 260 270 280 300 310 320 330 340 350 pF1KE4 KPIATCRYWHRSLNPKKLVEVKFSHLSRNMTLQRTMKLYRLPDVTKTSGLRPMEPKDIKS ::..:::::::::::.::.::::::::::::.::::::::::.. ::.:::::: ::: CCDS11 KPVGTCRYWHRSLNPRKLIEVKFSHLSRNMTMQRTMKLYRLPETPKTAGLRPMETKDIPV 290 300 310 320 330 340 360 370 380 390 400 410 pF1KE4 VRELINTYLKQFHLAPVMDEEEVAHWFLPREHIIDTFVVESPNGKLTDFLSFYTLPSTVM :..:.. :::::::.:::..::: ::: :.:.::::::::. ::..::::::::::::.: CCDS11 VHQLLTRYLKQFHLTPVMSQEEVEHWFYPQENIIDTFVVENANGEVTDFLSFYTLPSTIM 350 360 370 380 390 400 420 430 440 450 460 470 pF1KE4 HHPAHKSLKAAYSFYNIHTETPLLDLMSDALILAKSKGFDVFNALDLMENKTFLEKLKFG .::.::::::::::::.::.:::::::::::.::: :::::::::::::::::::::::: CCDS11 NHPTHKSLKAAYSFYNVHTQTPLLDLMSDALVLAKMKGFDVFNALDLMENKTFLEKLKFG 410 420 430 440 450 460 480 490 pF1KE4 IGDGNLQYYLYNWRCPGTDSEKVGLVLQ :::::::::::::.::. .:::::::: CCDS11 IGDGNLQYYLYNWKCPSMGAEKVGLVLQ 470 480 490 498 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sat Nov 5 22:35:46 2016 done: Sat Nov 5 22:35:46 2016 Total Scan time: 2.640 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]