FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6441, 464 aa 1>>>pF1KE6441 464 - 464 aa - 464 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.0837+/-0.000336; mu= 18.6596+/- 0.021 mean_var=61.2749+/-12.362, 0's: 0 Z-trim(114.2): 16 B-trim: 43 in 2/52 Lambda= 0.163845 statistics sampled from 23920 (23929) to 23920 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.652), E-opt: 0.2 (0.281), width: 16 Scan time: 5.900 The best scores are: opt bits E(85289) NP_061982 (OMIM: 605907,608540) chitobiosyldiphosp ( 464) 3197 764.3 0 NP_001317433 (OMIM: 605907,608540) chitobiosyldiph ( 353) 2460 590.0 3.4e-168 XP_016878947 (OMIM: 605907,608540) PREDICTED: chit ( 353) 2460 590.0 3.4e-168 XP_016878946 (OMIM: 605907,608540) PREDICTED: chit ( 451) 1989 478.7 1.4e-134 >>NP_061982 (OMIM: 605907,608540) chitobiosyldiphosphodo (464 aa) initn: 3197 init1: 3197 opt: 3197 Z-score: 4080.3 bits: 764.3 E(85289): 0 Smith-Waterman score: 3197; 99.8% identity (100.0% similar) in 464 aa overlap (1-464:1-464) 10 20 30 40 50 60 pF1KE6 MAASCLVLLALCLLLPLLLLGGWKRWRRGRAARHVVAVVLGDVGRSPRMQYHALSLAMHG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_061 MAASCLVLLALCLLLPLLLLGGWKRWRRGRAARHVVAVVLGDVGRSPRMQYHALSLAMHG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 FSVTLLGFCNSKPHDELLQNNRIQIVGLTELQSLAVGPRVFQYGVKVVLQAMYLLWKLMW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_061 FSVTLLGFCNSKPHDELLQNNRIQIVGLTELQSLAVGPRVFQYGVKVVLQAMYLLWKLMW 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 REPGAYIFLQNPPGLPSIAVCWFVGCLCGSKLVIDWHNYGYSIMGLVHGPNHPLVLLAKW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_061 REPGAYIFLQNPPGLPSIAVCWFVGCLCGSKLVIDWHNYGYSIMGLVHGPNHPLVLLAKW 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 YEKFFGRLSHLNLCVTNAMREDLADNWHIRAVTVYDKPASFFKETPLDLQHRLFMKLGSM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_061 YEKFFGRLSHLNLCVTNAMREDLADNWHIRAVTVYDKPASFFKETPLDLQHRLFMKLGSM 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE6 HSPFRARSEPEDPVTERSAFTERDAGNGLVTRLRERPALLVSSTSWTEDEDFSILLAALE ::::::::::::::::::::::::::.::::::::::::::::::::::::::::::::: NP_061 HSPFRARSEPEDPVTERSAFTERDAGSGLVTRLRERPALLVSSTSWTEDEDFSILLAALE 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE6 KFEQLTLDGHNLPSLVCVITGKGPLREYYSRLIHQKHFQHIQVCTPWLEAEDYPLLLGSA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_061 KFEQLTLDGHNLPSLVCVITGKGPLREYYSRLIHQKHFQHIQVCTPWLEAEDYPLLLGSA 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE6 DLGVCLHTSSSGLDLPMKVVDMFGCCLPVCAVNFKCLHELVKHEENGLVFEDSEELAAQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_061 DLGVCLHTSSSGLDLPMKVVDMFGCCLPVCAVNFKCLHELVKHEENGLVFEDSEELAAQL 370 380 390 400 410 420 430 440 450 460 pF1KE6 QMLFSNFPDPAGKLNQFRKNLRESQQLRWDESWVQTVLPLVMDT :::::::::::::::::::::::::::::::::::::::::::: NP_061 QMLFSNFPDPAGKLNQFRKNLRESQQLRWDESWVQTVLPLVMDT 430 440 450 460 >>NP_001317433 (OMIM: 605907,608540) chitobiosyldiphosph (353 aa) initn: 2460 init1: 2460 opt: 2460 Z-score: 3140.6 bits: 590.0 E(85289): 3.4e-168 Smith-Waterman score: 2460; 99.7% identity (100.0% similar) in 353 aa overlap (112-464:1-353) 90 100 110 120 130 140 pF1KE6 RIQIVGLTELQSLAVGPRVFQYGVKVVLQAMYLLWKLMWREPGAYIFLQNPPGLPSIAVC :::::::::::::::::::::::::::::: NP_001 MYLLWKLMWREPGAYIFLQNPPGLPSIAVC 10 20 30 150 160 170 180 190 200 pF1KE6 WFVGCLCGSKLVIDWHNYGYSIMGLVHGPNHPLVLLAKWYEKFFGRLSHLNLCVTNAMRE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 WFVGCLCGSKLVIDWHNYGYSIMGLVHGPNHPLVLLAKWYEKFFGRLSHLNLCVTNAMRE 40 50 60 70 80 90 210 220 230 240 250 260 pF1KE6 DLADNWHIRAVTVYDKPASFFKETPLDLQHRLFMKLGSMHSPFRARSEPEDPVTERSAFT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 DLADNWHIRAVTVYDKPASFFKETPLDLQHRLFMKLGSMHSPFRARSEPEDPVTERSAFT 100 110 120 130 140 150 270 280 290 300 310 320 pF1KE6 ERDAGNGLVTRLRERPALLVSSTSWTEDEDFSILLAALEKFEQLTLDGHNLPSLVCVITG :::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 ERDAGSGLVTRLRERPALLVSSTSWTEDEDFSILLAALEKFEQLTLDGHNLPSLVCVITG 160 170 180 190 200 210 330 340 350 360 370 380 pF1KE6 KGPLREYYSRLIHQKHFQHIQVCTPWLEAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 KGPLREYYSRLIHQKHFQHIQVCTPWLEAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVD 220 230 240 250 260 270 390 400 410 420 430 440 pF1KE6 MFGCCLPVCAVNFKCLHELVKHEENGLVFEDSEELAAQLQMLFSNFPDPAGKLNQFRKNL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MFGCCLPVCAVNFKCLHELVKHEENGLVFEDSEELAAQLQMLFSNFPDPAGKLNQFRKNL 280 290 300 310 320 330 450 460 pF1KE6 RESQQLRWDESWVQTVLPLVMDT ::::::::::::::::::::::: NP_001 RESQQLRWDESWVQTVLPLVMDT 340 350 >>XP_016878947 (OMIM: 605907,608540) PREDICTED: chitobio (353 aa) initn: 2460 init1: 2460 opt: 2460 Z-score: 3140.6 bits: 590.0 E(85289): 3.4e-168 Smith-Waterman score: 2460; 99.7% identity (100.0% similar) in 353 aa overlap (112-464:1-353) 90 100 110 120 130 140 pF1KE6 RIQIVGLTELQSLAVGPRVFQYGVKVVLQAMYLLWKLMWREPGAYIFLQNPPGLPSIAVC :::::::::::::::::::::::::::::: XP_016 MYLLWKLMWREPGAYIFLQNPPGLPSIAVC 10 20 30 150 160 170 180 190 200 pF1KE6 WFVGCLCGSKLVIDWHNYGYSIMGLVHGPNHPLVLLAKWYEKFFGRLSHLNLCVTNAMRE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 WFVGCLCGSKLVIDWHNYGYSIMGLVHGPNHPLVLLAKWYEKFFGRLSHLNLCVTNAMRE 40 50 60 70 80 90 210 220 230 240 250 260 pF1KE6 DLADNWHIRAVTVYDKPASFFKETPLDLQHRLFMKLGSMHSPFRARSEPEDPVTERSAFT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 DLADNWHIRAVTVYDKPASFFKETPLDLQHRLFMKLGSMHSPFRARSEPEDPVTERSAFT 100 110 120 130 140 150 270 280 290 300 310 320 pF1KE6 ERDAGNGLVTRLRERPALLVSSTSWTEDEDFSILLAALEKFEQLTLDGHNLPSLVCVITG :::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 ERDAGSGLVTRLRERPALLVSSTSWTEDEDFSILLAALEKFEQLTLDGHNLPSLVCVITG 160 170 180 190 200 210 330 340 350 360 370 380 pF1KE6 KGPLREYYSRLIHQKHFQHIQVCTPWLEAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 KGPLREYYSRLIHQKHFQHIQVCTPWLEAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVD 220 230 240 250 260 270 390 400 410 420 430 440 pF1KE6 MFGCCLPVCAVNFKCLHELVKHEENGLVFEDSEELAAQLQMLFSNFPDPAGKLNQFRKNL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MFGCCLPVCAVNFKCLHELVKHEENGLVFEDSEELAAQLQMLFSNFPDPAGKLNQFRKNL 280 290 300 310 320 330 450 460 pF1KE6 RESQQLRWDESWVQTVLPLVMDT ::::::::::::::::::::::: XP_016 RESQQLRWDESWVQTVLPLVMDT 340 350 >>XP_016878946 (OMIM: 605907,608540) PREDICTED: chitobio (451 aa) initn: 1989 init1: 1989 opt: 1989 Z-score: 2537.3 bits: 478.7 E(85289): 1.4e-134 Smith-Waterman score: 3084; 97.0% identity (97.2% similar) in 464 aa overlap (1-464:1-451) 10 20 30 40 50 60 pF1KE6 MAASCLVLLALCLLLPLLLLGGWKRWRRGRAARHVVAVVLGDVGRSPRMQYHALSLAMHG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MAASCLVLLALCLLLPLLLLGGWKRWRRGRAARHVVAVVLGDVGRSPRMQYHALSLAMHG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 FSVTLLGFCNSKPHDELLQNNRIQIVGLTELQSLAVGPRVFQYGVKVVLQAMYLLWKLMW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 FSVTLLGFCNSKPHDELLQNNRIQIVGLTELQSLAVGPRVFQYGVKVVLQAMYLLWKLMW 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 REPGAYIFLQNPPGLPSIAVCWFVGCLCGSKLVIDWHNYGYSIMGLVHGPNHPLVLLAKW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 REPGAYIFLQNPPGLPSIAVCWFVGCLCGSKLVIDWHNYGYSIMGLVHGPNHPLVLLAKW 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 YEKFFGRLSHLNLCVTNAMREDLADNWHIRAVTVYDKPASFFKETPLDLQHRLFMKLGSM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 YEKFFGRLSHLNLCVTNAMREDLADNWHIRAVTVYDKPASFFKETPLDLQHRLFMKLGSM 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE6 HSPFRARSEPEDPVTERSAFTERDAGNGLVTRLRERPALLVSSTSWTEDEDFSILLAALE ::::::::::::::::::::::::::.::::::::::::::::::::: XP_016 HSPFRARSEPEDPVTERSAFTERDAGSGLVTRLRERPALLVSSTSWTE------------ 250 260 270 280 310 320 330 340 350 360 pF1KE6 KFEQLTLDGHNLPSLVCVITGKGPLREYYSRLIHQKHFQHIQVCTPWLEAEDYPLLLGSA ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 -FEQLTLDGHNLPSLVCVITGKGPLREYYSRLIHQKHFQHIQVCTPWLEAEDYPLLLGSA 290 300 310 320 330 340 370 380 390 400 410 420 pF1KE6 DLGVCLHTSSSGLDLPMKVVDMFGCCLPVCAVNFKCLHELVKHEENGLVFEDSEELAAQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 DLGVCLHTSSSGLDLPMKVVDMFGCCLPVCAVNFKCLHELVKHEENGLVFEDSEELAAQL 350 360 370 380 390 400 430 440 450 460 pF1KE6 QMLFSNFPDPAGKLNQFRKNLRESQQLRWDESWVQTVLPLVMDT :::::::::::::::::::::::::::::::::::::::::::: XP_016 QMLFSNFPDPAGKLNQFRKNLRESQQLRWDESWVQTVLPLVMDT 410 420 430 440 450 464 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 13:20:07 2016 done: Tue Nov 8 13:20:08 2016 Total Scan time: 5.900 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]