FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1458, 271 aa 1>>>pF1KE1458 271 - 271 aa - 271 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.3705+/-0.000328; mu= 20.1569+/- 0.020 mean_var=56.1835+/-11.319, 0's: 0 Z-trim(115.0): 38 B-trim: 872 in 1/51 Lambda= 0.171108 statistics sampled from 25162 (25187) to 25162 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.686), E-opt: 0.2 (0.295), width: 16 Scan time: 5.400 The best scores are: opt bits E(85289) NP_006397 (OMIM: 300927) peroxiredoxin-4 precursor ( 271) 1843 462.7 3.3e-130 XP_016884719 (OMIM: 300927) PREDICTED: peroxiredox ( 350) 1737 436.6 3e-122 XP_005274495 (OMIM: 300927) PREDICTED: peroxiredox ( 257) 1303 329.4 4.2e-90 XP_016884720 (OMIM: 300927) PREDICTED: peroxiredox ( 336) 1197 303.3 3.9e-82 NP_005800 (OMIM: 600538) peroxiredoxin-2 [Homo sap ( 198) 957 243.9 1.8e-64 NP_001189360 (OMIM: 176763) peroxiredoxin-1 [Homo ( 199) 951 242.4 5e-64 NP_859047 (OMIM: 176763) peroxiredoxin-1 [Homo sap ( 199) 951 242.4 5e-64 NP_002565 (OMIM: 176763) peroxiredoxin-1 [Homo sap ( 199) 951 242.4 5e-64 NP_859048 (OMIM: 176763) peroxiredoxin-1 [Homo sap ( 199) 951 242.4 5e-64 NP_006784 (OMIM: 604769) thioredoxin-dependent per ( 256) 911 232.6 5.6e-61 NP_001289201 (OMIM: 604769) thioredoxin-dependent ( 198) 580 150.8 1.8e-36 NP_004896 (OMIM: 602316) peroxiredoxin-6 [Homo sap ( 224) 142 42.7 0.00071 NP_036226 (OMIM: 606583) peroxiredoxin-5, mitochon ( 214) 136 41.2 0.0019 >>NP_006397 (OMIM: 300927) peroxiredoxin-4 precursor [Ho (271 aa) initn: 1843 init1: 1843 opt: 1843 Z-score: 2458.7 bits: 462.7 E(85289): 3.3e-130 Smith-Waterman score: 1843; 100.0% identity (100.0% similar) in 271 aa overlap (1-271:1-271) 10 20 30 40 50 60 pF1KE1 MEALPLLAATTPDHGRHRRLLLLPLLLFLLPAGAVQGWETEERPRTREEECHFYAGGQVY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 MEALPLLAATTPDHGRHRRLLLLPLLLFLLPAGAVQGWETEERPRTREEECHFYAGGQVY 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 PGEASRVSVADHSLHLSKAKISKPAPYWEGTAVIDGEFKELKLTDYRGKYLVFFFYPLDF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 PGEASRVSVADHSLHLSKAKISKPAPYWEGTAVIDGEFKELKLTDYRGKYLVFFFYPLDF 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 TFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 TFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 THQISKDYGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQAFQYTDK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 THQISKDYGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQAFQYTDK 190 200 210 220 230 240 250 260 270 pF1KE1 HGEVCPAGWKPGSETIIPDPAGKLKYFDKLN ::::::::::::::::::::::::::::::: NP_006 HGEVCPAGWKPGSETIIPDPAGKLKYFDKLN 250 260 270 >>XP_016884719 (OMIM: 300927) PREDICTED: peroxiredoxin-4 (350 aa) initn: 1737 init1: 1737 opt: 1737 Z-score: 2315.8 bits: 436.6 E(85289): 3e-122 Smith-Waterman score: 1737; 99.6% identity (100.0% similar) in 256 aa overlap (1-256:1-256) 10 20 30 40 50 60 pF1KE1 MEALPLLAATTPDHGRHRRLLLLPLLLFLLPAGAVQGWETEERPRTREEECHFYAGGQVY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MEALPLLAATTPDHGRHRRLLLLPLLLFLLPAGAVQGWETEERPRTREEECHFYAGGQVY 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 PGEASRVSVADHSLHLSKAKISKPAPYWEGTAVIDGEFKELKLTDYRGKYLVFFFYPLDF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 PGEASRVSVADHSLHLSKAKISKPAPYWEGTAVIDGEFKELKLTDYRGKYLVFFFYPLDF 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 TFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 TFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 THQISKDYGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQAFQYTDK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 THQISKDYGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQAFQYTDK 190 200 210 220 230 240 250 260 270 pF1KE1 HGEVCPAGWKPGSETIIPDPAGKLKYFDKLN :::::::::::::::. XP_016 HGEVCPAGWKPGSETVSIYICFYVELMVRVEKNAGRAQWLTPVIPALWEAEAGRSRGQEM 250 260 270 280 290 300 >>XP_005274495 (OMIM: 300927) PREDICTED: peroxiredoxin-4 (257 aa) initn: 1303 init1: 1303 opt: 1303 Z-score: 1738.6 bits: 329.4 E(85289): 4.2e-90 Smith-Waterman score: 1303; 99.5% identity (100.0% similar) in 191 aa overlap (81-271:67-257) 60 70 80 90 100 110 pF1KE1 CHFYAGGQVYPGEASRVSVADHSLHLSKAKISKPAPYWEGTAVIDGEFKELKLTDYRGKY .::::::::::::::::::::::::::::: XP_005 EGEDWEREPPRQRPPIYEPPESEELPDNVMVSKPAPYWEGTAVIDGEFKELKLTDYRGKY 40 50 60 70 80 90 120 130 140 150 160 170 pF1KE1 LVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 LVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGLG 100 110 120 130 140 150 180 190 200 210 220 230 pF1KE1 PIRIPLLSDLTHQISKDYGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPVGRSVDETLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 PIRIPLLSDLTHQISKDYGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPVGRSVDETLR 160 170 180 190 200 210 240 250 260 270 pF1KE1 LVQAFQYTDKHGEVCPAGWKPGSETIIPDPAGKLKYFDKLN ::::::::::::::::::::::::::::::::::::::::: XP_005 LVQAFQYTDKHGEVCPAGWKPGSETIIPDPAGKLKYFDKLN 220 230 240 250 >>XP_016884720 (OMIM: 300927) PREDICTED: peroxiredoxin-4 (336 aa) initn: 1193 init1: 1193 opt: 1197 Z-score: 1595.6 bits: 303.3 E(85289): 3.9e-82 Smith-Waterman score: 1197; 98.9% identity (100.0% similar) in 176 aa overlap (81-256:67-242) 60 70 80 90 100 110 pF1KE1 CHFYAGGQVYPGEASRVSVADHSLHLSKAKISKPAPYWEGTAVIDGEFKELKLTDYRGKY .::::::::::::::::::::::::::::: XP_016 EGEDWEREPPRQRPPIYEPPESEELPDNVMVSKPAPYWEGTAVIDGEFKELKLTDYRGKY 40 50 60 70 80 90 120 130 140 150 160 170 pF1KE1 LVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 LVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGLG 100 110 120 130 140 150 180 190 200 210 220 230 pF1KE1 PIRIPLLSDLTHQISKDYGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPVGRSVDETLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 PIRIPLLSDLTHQISKDYGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPVGRSVDETLR 160 170 180 190 200 210 240 250 260 270 pF1KE1 LVQAFQYTDKHGEVCPAGWKPGSETIIPDPAGKLKYFDKLN :::::::::::::::::::::::::. XP_016 LVQAFQYTDKHGEVCPAGWKPGSETVSIYICFYVELMVRVEKNAGRAQWLTPVIPALWEA 220 230 240 250 260 270 >>NP_005800 (OMIM: 600538) peroxiredoxin-2 [Homo sapiens (198 aa) initn: 960 init1: 944 opt: 957 Z-score: 1278.5 bits: 243.9 E(85289): 1.8e-64 Smith-Waterman score: 957; 70.5% identity (90.2% similar) in 193 aa overlap (79-271:6-198) 50 60 70 80 90 100 pF1KE1 EECHFYAGGQVYPGEASRVSVADHSLHLSKAKISKPAPYWEGTAVIDGEFKELKLTDYRG :.:.:::: ...:::.:: :::.::.::.: NP_005 MASGNARIGKPAPDFKATAVVDGAFKEVKLSDYKG 10 20 30 110 120 130 140 150 160 pF1KE1 KYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGG ::.:.::::::::::::::::::..: :.::... ::.. ::::::::::::::::..:: NP_005 KYVVLFFYPLDFTFVCPTEIIAFSNRAEDFRKLGCEVLGVSVDSQFTHLAWINTPRKEGG 40 50 60 70 80 90 170 180 190 200 210 220 pF1KE1 LGPIRIPLLSDLTHQISKDYGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPVGRSVDET :::. ::::.:.:...:.:::: : : . ::::::: ::.:::::.:::::::::::. NP_005 LGPLNIPLLADVTRRLSEDYGVLKTDEGIAYRGLFIIDGKGVLRQITVNDLPVGRSVDEA 100 110 120 130 140 150 230 240 250 260 270 pF1KE1 LRLVQAFQYTDKHGEVCPAGWKPGSETIIPDPAGKLKYFDKLN :::::::::::.:::::::::::::.:: :. . .::.: : NP_005 LRLVQAFQYTDEHGEVCPAGWKPGSDTIKPNVDDSKEYFSKHN 160 170 180 190 >>NP_001189360 (OMIM: 176763) peroxiredoxin-1 [Homo sapi (199 aa) initn: 966 init1: 905 opt: 951 Z-score: 1270.5 bits: 242.4 E(85289): 5e-64 Smith-Waterman score: 951; 70.3% identity (89.6% similar) in 192 aa overlap (79-269:6-197) 50 60 70 80 90 100 pF1KE1 EECHFYAGGQVYPGEASRVSVADHSLHLSKAKISKPAPYWEGTAVI-DGEFKELKLTDYR :::..::: ...:::. ::.::...:.::. NP_001 MSSGNAKIGHPAPNFKATAVMPDGQFKDISLSDYK 10 20 30 110 120 130 140 150 160 pF1KE1 GKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQG :::.::::::::::::::::::::.:: :::...: .:.. ::::.: ::::.:::..:: NP_001 GKYVVFFFYPLDFTFVCPTEIIAFSDRAEEFKKLNCQVIGASVDSHFCHLAWVNTPKKQG 40 50 60 70 80 90 170 180 190 200 210 220 pF1KE1 GLGPIRIPLLSDLTHQISKDYGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPVGRSVDE ::::. :::.:: . :..:::: : : ..::::::::::::::::.::::::::::: NP_001 GLGPMNIPLVSDPKRTIAQDYGVLKADEGISFRGLFIIDDKGILRQITVNDLPVGRSVDE 100 110 120 130 140 150 230 240 250 260 270 pF1KE1 TLRLVQAFQYTDKHGEVCPAGWKPGSETIIPDPAGKLKYFDKLN :::::::::.::::::::::::::::.:: :: . .::.: NP_001 TLRLVQAFQFTDKHGEVCPAGWKPGSDTIKPDVQKSKEYFSKQK 160 170 180 190 >>NP_859047 (OMIM: 176763) peroxiredoxin-1 [Homo sapiens (199 aa) initn: 966 init1: 905 opt: 951 Z-score: 1270.5 bits: 242.4 E(85289): 5e-64 Smith-Waterman score: 951; 70.3% identity (89.6% similar) in 192 aa overlap (79-269:6-197) 50 60 70 80 90 100 pF1KE1 EECHFYAGGQVYPGEASRVSVADHSLHLSKAKISKPAPYWEGTAVI-DGEFKELKLTDYR :::..::: ...:::. ::.::...:.::. NP_859 MSSGNAKIGHPAPNFKATAVMPDGQFKDISLSDYK 10 20 30 110 120 130 140 150 160 pF1KE1 GKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQG :::.::::::::::::::::::::.:: :::...: .:.. ::::.: ::::.:::..:: NP_859 GKYVVFFFYPLDFTFVCPTEIIAFSDRAEEFKKLNCQVIGASVDSHFCHLAWVNTPKKQG 40 50 60 70 80 90 170 180 190 200 210 220 pF1KE1 GLGPIRIPLLSDLTHQISKDYGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPVGRSVDE ::::. :::.:: . :..:::: : : ..::::::::::::::::.::::::::::: NP_859 GLGPMNIPLVSDPKRTIAQDYGVLKADEGISFRGLFIIDDKGILRQITVNDLPVGRSVDE 100 110 120 130 140 150 230 240 250 260 270 pF1KE1 TLRLVQAFQYTDKHGEVCPAGWKPGSETIIPDPAGKLKYFDKLN :::::::::.::::::::::::::::.:: :: . .::.: NP_859 TLRLVQAFQFTDKHGEVCPAGWKPGSDTIKPDVQKSKEYFSKQK 160 170 180 190 >>NP_002565 (OMIM: 176763) peroxiredoxin-1 [Homo sapiens (199 aa) initn: 966 init1: 905 opt: 951 Z-score: 1270.5 bits: 242.4 E(85289): 5e-64 Smith-Waterman score: 951; 70.3% identity (89.6% similar) in 192 aa overlap (79-269:6-197) 50 60 70 80 90 100 pF1KE1 EECHFYAGGQVYPGEASRVSVADHSLHLSKAKISKPAPYWEGTAVI-DGEFKELKLTDYR :::..::: ...:::. ::.::...:.::. NP_002 MSSGNAKIGHPAPNFKATAVMPDGQFKDISLSDYK 10 20 30 110 120 130 140 150 160 pF1KE1 GKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQG :::.::::::::::::::::::::.:: :::...: .:.. ::::.: ::::.:::..:: NP_002 GKYVVFFFYPLDFTFVCPTEIIAFSDRAEEFKKLNCQVIGASVDSHFCHLAWVNTPKKQG 40 50 60 70 80 90 170 180 190 200 210 220 pF1KE1 GLGPIRIPLLSDLTHQISKDYGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPVGRSVDE ::::. :::.:: . :..:::: : : ..::::::::::::::::.::::::::::: NP_002 GLGPMNIPLVSDPKRTIAQDYGVLKADEGISFRGLFIIDDKGILRQITVNDLPVGRSVDE 100 110 120 130 140 150 230 240 250 260 270 pF1KE1 TLRLVQAFQYTDKHGEVCPAGWKPGSETIIPDPAGKLKYFDKLN :::::::::.::::::::::::::::.:: :: . .::.: NP_002 TLRLVQAFQFTDKHGEVCPAGWKPGSDTIKPDVQKSKEYFSKQK 160 170 180 190 >>NP_859048 (OMIM: 176763) peroxiredoxin-1 [Homo sapiens (199 aa) initn: 966 init1: 905 opt: 951 Z-score: 1270.5 bits: 242.4 E(85289): 5e-64 Smith-Waterman score: 951; 70.3% identity (89.6% similar) in 192 aa overlap (79-269:6-197) 50 60 70 80 90 100 pF1KE1 EECHFYAGGQVYPGEASRVSVADHSLHLSKAKISKPAPYWEGTAVI-DGEFKELKLTDYR :::..::: ...:::. ::.::...:.::. NP_859 MSSGNAKIGHPAPNFKATAVMPDGQFKDISLSDYK 10 20 30 110 120 130 140 150 160 pF1KE1 GKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQG :::.::::::::::::::::::::.:: :::...: .:.. ::::.: ::::.:::..:: NP_859 GKYVVFFFYPLDFTFVCPTEIIAFSDRAEEFKKLNCQVIGASVDSHFCHLAWVNTPKKQG 40 50 60 70 80 90 170 180 190 200 210 220 pF1KE1 GLGPIRIPLLSDLTHQISKDYGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPVGRSVDE ::::. :::.:: . :..:::: : : ..::::::::::::::::.::::::::::: NP_859 GLGPMNIPLVSDPKRTIAQDYGVLKADEGISFRGLFIIDDKGILRQITVNDLPVGRSVDE 100 110 120 130 140 150 230 240 250 260 270 pF1KE1 TLRLVQAFQYTDKHGEVCPAGWKPGSETIIPDPAGKLKYFDKLN :::::::::.::::::::::::::::.:: :: . .::.: NP_859 TLRLVQAFQFTDKHGEVCPAGWKPGSDTIKPDVQKSKEYFSKQK 160 170 180 190 >>NP_006784 (OMIM: 604769) thioredoxin-dependent peroxid (256 aa) initn: 924 init1: 905 opt: 911 Z-score: 1215.7 bits: 232.6 E(85289): 5.6e-61 Smith-Waterman score: 911; 66.5% identity (90.6% similar) in 191 aa overlap (81-271:65-255) 60 70 80 90 100 110 pF1KE1 CHFYAGGQVYPGEASRVSVADHSLHLSKAKISKPAPYWEGTAVIDGEFKELKLTDYRGKY ... :::..::::..::::.:.: :..::: NP_006 CGRTSLTNLLCSGSSQAKLFSTSSSCHAPAVTQHAPYFKGTAVVNGEFKDLSLDDFKGKY 40 50 60 70 80 90 120 130 140 150 160 170 pF1KE1 LVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGLG ::.:::::::::::::::.::.:. .::...: :::: ::::.:.:::::::::..:::: NP_006 LVLFFYPLDFTFVCPTEIVAFSDKANEFHDVNCEVVAVSVDSHFSHLAWINTPRKNGGLG 100 110 120 130 140 150 180 190 200 210 220 230 pF1KE1 PIRIPLLSDLTHQISKDYGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPVGRSVDETLR . : ::::::.:::.:::: :: :: .:::::::: .:.......:::::::::.:::: NP_006 HMNIALLSDLTKQISRDYGVLLEGSGLALRGLFIIDPNGVIKHLSVNDLPVGRSVEETLR 160 170 180 190 200 210 240 250 260 270 pF1KE1 LVQAFQYTDKHGEVCPAGWKPGSETIIPDPAGKLKYFDKLN ::.::::.. :::::::.: : : :: :.::.. .::.:.: NP_006 LVKAFQYVETHGEVCPANWTPDSPTIKPSPAASKEYFQKVNQ 220 230 240 250 271 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 23:20:03 2016 done: Sun Nov 6 23:20:04 2016 Total Scan time: 5.400 Total Display time: 0.010 Function used was FASTA [36.3.4 Apr, 2011]