FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1458, 271 aa 1>>>pF1KE1458 271 - 271 aa - 271 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.9338+/-0.000682; mu= 16.8329+/- 0.041 mean_var=56.2364+/-11.248, 0's: 0 Z-trim(108.7): 21 B-trim: 0 in 0/49 Lambda= 0.171027 statistics sampled from 10391 (10402) to 10391 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.703), E-opt: 0.2 (0.32), width: 16 Scan time: 2.010 The best scores are: opt bits E(32554) CCDS14206.1 PRDX4 gene_id:10549|Hs108|chrX ( 271) 1843 462.4 1.5e-130 CCDS12281.1 PRDX2 gene_id:7001|Hs108|chr19 ( 198) 957 243.7 7.5e-65 CCDS522.1 PRDX1 gene_id:5052|Hs108|chr1 ( 199) 951 242.3 2.1e-64 CCDS7611.1 PRDX3 gene_id:10935|Hs108|chr10 ( 256) 911 232.4 2.4e-61 >>CCDS14206.1 PRDX4 gene_id:10549|Hs108|chrX (271 aa) initn: 1843 init1: 1843 opt: 1843 Z-score: 2457.2 bits: 462.4 E(32554): 1.5e-130 Smith-Waterman score: 1843; 100.0% identity (100.0% similar) in 271 aa overlap (1-271:1-271) 10 20 30 40 50 60 pF1KE1 MEALPLLAATTPDHGRHRRLLLLPLLLFLLPAGAVQGWETEERPRTREEECHFYAGGQVY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 MEALPLLAATTPDHGRHRRLLLLPLLLFLLPAGAVQGWETEERPRTREEECHFYAGGQVY 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 PGEASRVSVADHSLHLSKAKISKPAPYWEGTAVIDGEFKELKLTDYRGKYLVFFFYPLDF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 PGEASRVSVADHSLHLSKAKISKPAPYWEGTAVIDGEFKELKLTDYRGKYLVFFFYPLDF 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 TFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 TFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 THQISKDYGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQAFQYTDK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 THQISKDYGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQAFQYTDK 190 200 210 220 230 240 250 260 270 pF1KE1 HGEVCPAGWKPGSETIIPDPAGKLKYFDKLN ::::::::::::::::::::::::::::::: CCDS14 HGEVCPAGWKPGSETIIPDPAGKLKYFDKLN 250 260 270 >>CCDS12281.1 PRDX2 gene_id:7001|Hs108|chr19 (198 aa) initn: 960 init1: 944 opt: 957 Z-score: 1277.8 bits: 243.7 E(32554): 7.5e-65 Smith-Waterman score: 957; 70.5% identity (90.2% similar) in 193 aa overlap (79-271:6-198) 50 60 70 80 90 100 pF1KE1 EECHFYAGGQVYPGEASRVSVADHSLHLSKAKISKPAPYWEGTAVIDGEFKELKLTDYRG :.:.:::: ...:::.:: :::.::.::.: CCDS12 MASGNARIGKPAPDFKATAVVDGAFKEVKLSDYKG 10 20 30 110 120 130 140 150 160 pF1KE1 KYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGG ::.:.::::::::::::::::::..: :.::... ::.. ::::::::::::::::..:: CCDS12 KYVVLFFYPLDFTFVCPTEIIAFSNRAEDFRKLGCEVLGVSVDSQFTHLAWINTPRKEGG 40 50 60 70 80 90 170 180 190 200 210 220 pF1KE1 LGPIRIPLLSDLTHQISKDYGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPVGRSVDET :::. ::::.:.:...:.:::: : : . ::::::: ::.:::::.:::::::::::. CCDS12 LGPLNIPLLADVTRRLSEDYGVLKTDEGIAYRGLFIIDGKGVLRQITVNDLPVGRSVDEA 100 110 120 130 140 150 230 240 250 260 270 pF1KE1 LRLVQAFQYTDKHGEVCPAGWKPGSETIIPDPAGKLKYFDKLN :::::::::::.:::::::::::::.:: :. . .::.: : CCDS12 LRLVQAFQYTDEHGEVCPAGWKPGSDTIKPNVDDSKEYFSKHN 160 170 180 190 >>CCDS522.1 PRDX1 gene_id:5052|Hs108|chr1 (199 aa) initn: 966 init1: 905 opt: 951 Z-score: 1269.8 bits: 242.3 E(32554): 2.1e-64 Smith-Waterman score: 951; 70.3% identity (89.6% similar) in 192 aa overlap (79-269:6-197) 50 60 70 80 90 100 pF1KE1 EECHFYAGGQVYPGEASRVSVADHSLHLSKAKISKPAPYWEGTAVI-DGEFKELKLTDYR :::..::: ...:::. ::.::...:.::. CCDS52 MSSGNAKIGHPAPNFKATAVMPDGQFKDISLSDYK 10 20 30 110 120 130 140 150 160 pF1KE1 GKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQG :::.::::::::::::::::::::.:: :::...: .:.. ::::.: ::::.:::..:: CCDS52 GKYVVFFFYPLDFTFVCPTEIIAFSDRAEEFKKLNCQVIGASVDSHFCHLAWVNTPKKQG 40 50 60 70 80 90 170 180 190 200 210 220 pF1KE1 GLGPIRIPLLSDLTHQISKDYGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPVGRSVDE ::::. :::.:: . :..:::: : : ..::::::::::::::::.::::::::::: CCDS52 GLGPMNIPLVSDPKRTIAQDYGVLKADEGISFRGLFIIDDKGILRQITVNDLPVGRSVDE 100 110 120 130 140 150 230 240 250 260 270 pF1KE1 TLRLVQAFQYTDKHGEVCPAGWKPGSETIIPDPAGKLKYFDKLN :::::::::.::::::::::::::::.:: :: . .::.: CCDS52 TLRLVQAFQFTDKHGEVCPAGWKPGSDTIKPDVQKSKEYFSKQK 160 170 180 190 >>CCDS7611.1 PRDX3 gene_id:10935|Hs108|chr10 (256 aa) initn: 924 init1: 905 opt: 911 Z-score: 1214.8 bits: 232.4 E(32554): 2.4e-61 Smith-Waterman score: 911; 66.5% identity (90.6% similar) in 191 aa overlap (81-271:65-255) 60 70 80 90 100 110 pF1KE1 CHFYAGGQVYPGEASRVSVADHSLHLSKAKISKPAPYWEGTAVIDGEFKELKLTDYRGKY ... :::..::::..::::.:.: :..::: CCDS76 CGRTSLTNLLCSGSSQAKLFSTSSSCHAPAVTQHAPYFKGTAVVNGEFKDLSLDDFKGKY 40 50 60 70 80 90 120 130 140 150 160 170 pF1KE1 LVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGLG ::.:::::::::::::::.::.:. .::...: :::: ::::.:.:::::::::..:::: CCDS76 LVLFFYPLDFTFVCPTEIVAFSDKANEFHDVNCEVVAVSVDSHFSHLAWINTPRKNGGLG 100 110 120 130 140 150 180 190 200 210 220 230 pF1KE1 PIRIPLLSDLTHQISKDYGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPVGRSVDETLR . : ::::::.:::.:::: :: :: .:::::::: .:.......:::::::::.:::: CCDS76 HMNIALLSDLTKQISRDYGVLLEGSGLALRGLFIIDPNGVIKHLSVNDLPVGRSVEETLR 160 170 180 190 200 210 240 250 260 270 pF1KE1 LVQAFQYTDKHGEVCPAGWKPGSETIIPDPAGKLKYFDKLN ::.::::.. :::::::.: : : :: :.::.. .::.:.: CCDS76 LVKAFQYVETHGEVCPANWTPDSPTIKPSPAASKEYFQKVNQ 220 230 240 250 271 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 23:20:02 2016 done: Sun Nov 6 23:20:03 2016 Total Scan time: 2.010 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]