FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB7517, 110 aa 1>>>pF1KB7517 110 - 110 aa - 110 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 9.1872+/-0.00104; mu= -6.0830+/- 0.064 mean_var=294.2462+/-58.545, 0's: 0 Z-trim(113.8): 27 B-trim: 173 in 1/53 Lambda= 0.074769 statistics sampled from 14409 (14427) to 14409 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.747), E-opt: 0.2 (0.443), width: 16 Scan time: 1.710 The best scores are: opt bits E(32554) CCDS46541.1 PTMA gene_id:5757|Hs108|chr2 ( 110) 703 87.4 1.9e-18 CCDS42833.1 PTMA gene_id:5757|Hs108|chr2 ( 111) 691 86.1 4.8e-18 >>CCDS46541.1 PTMA gene_id:5757|Hs108|chr2 (110 aa) initn: 703 init1: 703 opt: 703 Z-score: 444.5 bits: 87.4 E(32554): 1.9e-18 Smith-Waterman score: 703; 100.0% identity (100.0% similar) in 110 aa overlap (1-110:1-110) 10 20 30 40 50 60 pF1KB7 MSDAAVDTSSEITTKDLKEKKEVVEEAENGRDAPANGNANEENGEQEADNEVDEEEEEGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 MSDAAVDTSSEITTKDLKEKKEVVEEAENGRDAPANGNANEENGEQEADNEVDEEEEEGG 10 20 30 40 50 60 70 80 90 100 110 pF1KB7 EEEEEEEEGDGEEEDGDEDEEAESATGKRAAEDDEDDDVDTKKQKTDEDD :::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 EEEEEEEEGDGEEEDGDEDEEAESATGKRAAEDDEDDDVDTKKQKTDEDD 70 80 90 100 110 >>CCDS42833.1 PTMA gene_id:5757|Hs108|chr2 (111 aa) initn: 465 init1: 465 opt: 691 Z-score: 437.5 bits: 86.1 E(32554): 4.8e-18 Smith-Waterman score: 691; 99.1% identity (99.1% similar) in 111 aa overlap (1-110:1-111) 10 20 30 40 50 pF1KB7 MSDAAVDTSSEITTKDLKEKKEVVEEAENGRDAPANGNA-NEENGEQEADNEVDEEEEEG ::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::: CCDS42 MSDAAVDTSSEITTKDLKEKKEVVEEAENGRDAPANGNAENEENGEQEADNEVDEEEEEG 10 20 30 40 50 60 60 70 80 90 100 110 pF1KB7 GEEEEEEEEGDGEEEDGDEDEEAESATGKRAAEDDEDDDVDTKKQKTDEDD ::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 GEEEEEEEEGDGEEEDGDEDEEAESATGKRAAEDDEDDDVDTKKQKTDEDD 70 80 90 100 110 110 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Thu Sep 21 11:31:49 2017 done: Thu Sep 21 11:31:49 2017 Total Scan time: 1.710 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]