FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6324, 438 aa 1>>>pF1KE6324 438 - 438 aa - 438 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.1186+/-0.000779; mu= 18.1607+/- 0.047 mean_var=60.2012+/-12.608, 0's: 0 Z-trim(107.1): 18 B-trim: 0 in 0/49 Lambda= 0.165300 statistics sampled from 9343 (9346) to 9343 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.655), E-opt: 0.2 (0.287), width: 16 Scan time: 2.070 The best scores are: opt bits E(32554) CCDS46968.1 ALG3 gene_id:10195|Hs108|chr3 ( 438) 3014 727.2 7.7e-210 CCDS46967.1 ALG3 gene_id:10195|Hs108|chr3 ( 390) 2562 619.4 2e-177 >>CCDS46968.1 ALG3 gene_id:10195|Hs108|chr3 (438 aa) initn: 3014 init1: 3014 opt: 3014 Z-score: 3880.7 bits: 727.2 E(32554): 7.7e-210 Smith-Waterman score: 3014; 100.0% identity (100.0% similar) in 438 aa overlap (1-438:1-438) 10 20 30 40 50 60 pF1KE6 MAAGLRKRGRSGSAAQAEGLCKQWLQRAWQERRLLLREPRYTLLVAACLCLAEVGITFWV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 MAAGLRKRGRSGSAAQAEGLCKQWLQRAWQERRLLLREPRYTLLVAACLCLAEVGITFWV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 IHRVAYTEIDWKAYMAEVEGVINGTYDYTQLQGDTGPLVYPAGFVYIFMGLYYATSRGTD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 IHRVAYTEIDWKAYMAEVEGVINGTYDYTQLQGDTGPLVYPAGFVYIFMGLYYATSRGTD 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 IRMAQNIFAVLYLATLLLVFLIYHQTCKVPPFVFFFMCCASYRVHSIFVLRLFNDPVAMV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 IRMAQNIFAVLYLATLLLVFLIYHQTCKVPPFVFFFMCCASYRVHSIFVLRLFNDPVAMV 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 LLFLSINLLLAQRWGWGCCFFSLAVSVKMNVLLFAPGLLFLLLTQFGFRGALPKLGICAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 LLFLSINLLLAQRWGWGCCFFSLAVSVKMNVLLFAPGLLFLLLTQFGFRGALPKLGICAG 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE6 LQVVLGLPFLLENPSGYLSRSFDLGRQFLFHWTVNWRFLPEALFLHRAFHLALLTAHLTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 LQVVLGLPFLLENPSGYLSRSFDLGRQFLFHWTVNWRFLPEALFLHRAFHLALLTAHLTL 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE6 LLLFALCRWHRTGESILSLLRDPSKRKVPPQPLTPNQIVSTLFTSNFIGICFSRSLHYQF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 LLLFALCRWHRTGESILSLLRDPSKRKVPPQPLTPNQIVSTLFTSNFIGICFSRSLHYQF 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE6 YVWYFHTLPYLLWAMPARWLTHLLRLLVLGLIELSWNTYPSTSCSSAALHICHAVILLQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 YVWYFHTLPYLLWAMPARWLTHLLRLLVLGLIELSWNTYPSTSCSSAALHICHAVILLQL 370 380 390 400 410 420 430 pF1KE6 WLGPQPFPKSTQHSKKAH :::::::::::::::::: CCDS46 WLGPQPFPKSTQHSKKAH 430 >>CCDS46967.1 ALG3 gene_id:10195|Hs108|chr3 (390 aa) initn: 2562 init1: 2562 opt: 2562 Z-score: 3299.0 bits: 619.4 E(32554): 2e-177 Smith-Waterman score: 2562; 100.0% identity (100.0% similar) in 372 aa overlap (67-438:19-390) 40 50 60 70 80 90 pF1KE6 REPRYTLLVAACLCLAEVGITFWVIHRVAYTEIDWKAYMAEVEGVINGTYDYTQLQGDTG :::::::::::::::::::::::::::::: CCDS46 MFPAQAKENAGFSGCGGDTEIDWKAYMAEVEGVINGTYDYTQLQGDTG 10 20 30 40 100 110 120 130 140 150 pF1KE6 PLVYPAGFVYIFMGLYYATSRGTDIRMAQNIFAVLYLATLLLVFLIYHQTCKVPPFVFFF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 PLVYPAGFVYIFMGLYYATSRGTDIRMAQNIFAVLYLATLLLVFLIYHQTCKVPPFVFFF 50 60 70 80 90 100 160 170 180 190 200 210 pF1KE6 MCCASYRVHSIFVLRLFNDPVAMVLLFLSINLLLAQRWGWGCCFFSLAVSVKMNVLLFAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 MCCASYRVHSIFVLRLFNDPVAMVLLFLSINLLLAQRWGWGCCFFSLAVSVKMNVLLFAP 110 120 130 140 150 160 220 230 240 250 260 270 pF1KE6 GLLFLLLTQFGFRGALPKLGICAGLQVVLGLPFLLENPSGYLSRSFDLGRQFLFHWTVNW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 GLLFLLLTQFGFRGALPKLGICAGLQVVLGLPFLLENPSGYLSRSFDLGRQFLFHWTVNW 170 180 190 200 210 220 280 290 300 310 320 330 pF1KE6 RFLPEALFLHRAFHLALLTAHLTLLLLFALCRWHRTGESILSLLRDPSKRKVPPQPLTPN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 RFLPEALFLHRAFHLALLTAHLTLLLLFALCRWHRTGESILSLLRDPSKRKVPPQPLTPN 230 240 250 260 270 280 340 350 360 370 380 390 pF1KE6 QIVSTLFTSNFIGICFSRSLHYQFYVWYFHTLPYLLWAMPARWLTHLLRLLVLGLIELSW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 QIVSTLFTSNFIGICFSRSLHYQFYVWYFHTLPYLLWAMPARWLTHLLRLLVLGLIELSW 290 300 310 320 330 340 400 410 420 430 pF1KE6 NTYPSTSCSSAALHICHAVILLQLWLGPQPFPKSTQHSKKAH :::::::::::::::::::::::::::::::::::::::::: CCDS46 NTYPSTSCSSAALHICHAVILLQLWLGPQPFPKSTQHSKKAH 350 360 370 380 390 438 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 12:06:42 2016 done: Tue Nov 8 12:06:42 2016 Total Scan time: 2.070 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]