FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6323, 440 aa 1>>>pF1KE6323 440 - 440 aa - 440 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.3448+/-0.00105; mu= 12.2815+/- 0.063 mean_var=92.3861+/-18.582, 0's: 0 Z-trim(105.3): 48 B-trim: 0 in 0/51 Lambda= 0.133435 statistics sampled from 8321 (8364) to 8321 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.632), E-opt: 0.2 (0.257), width: 16 Scan time: 1.820 The best scores are: opt bits E(32554) CCDS5424.1 PLEKHA8 gene_id:84725|Hs108|chr7 ( 440) 2888 566.5 1.8e-161 CCDS75574.1 PLEKHA8 gene_id:84725|Hs108|chr7 ( 459) 2847 558.6 4.5e-159 CCDS56473.1 PLEKHA8 gene_id:84725|Hs108|chr7 ( 519) 2847 558.7 5e-159 CCDS33336.1 PLEKHA3 gene_id:65977|Hs108|chr2 ( 300) 843 172.8 4.3e-43 CCDS55598.1 OSBPL9 gene_id:114883|Hs108|chr1 ( 723) 290 66.5 1e-10 >>CCDS5424.1 PLEKHA8 gene_id:84725|Hs108|chr7 (440 aa) initn: 2888 init1: 2888 opt: 2888 Z-score: 3012.3 bits: 566.5 E(32554): 1.8e-161 Smith-Waterman score: 2888; 100.0% identity (100.0% similar) in 440 aa overlap (1-440:1-440) 10 20 30 40 50 60 pF1KE6 MEGVLYKWTNYLSGWQPRWFLLCGGILSYYDSPEDAWKGCKGSIQMAVCEIQVHSVDNTR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 MEGVLYKWTNYLSGWQPRWFLLCGGILSYYDSPEDAWKGCKGSIQMAVCEIQVHSVDNTR 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 MDLIIPGEQYFYLKARSVAERQRWLVALGSAKACLTDSRTQKEKEFAENTENLKTKMSEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 MDLIIPGEQYFYLKARSVAERQRWLVALGSAKACLTDSRTQKEKEFAENTENLKTKMSEL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 RLYCDLLVQQVDKTKEVTTTGVSNSEEGIDVGTLLKSTCNTFLKTLEECMQIANAAFTSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 RLYCDLLVQQVDKTKEVTTTGVSNSEEGIDVGTLLKSTCNTFLKTLEECMQIANAAFTSE 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 LLYRTPPGSPQLAMLKSSKMKHPIIPIHNSLERQMELSTCENGSLNMEINGEEEILMKNK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 LLYRTPPGSPQLAMLKSSKMKHPIIPIHNSLERQMELSTCENGSLNMEINGEEEILMKNK 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE6 NSLYLKSAEIDCSISSEENTDDNITVQGEIRKEDGMENLKNHDNNLTQSGSDSSCSPECL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 NSLYLKSAEIDCSISSEENTDDNITVQGEIRKEDGMENLKNHDNNLTQSGSDSSCSPECL 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE6 WEEGKEVIPTFFSTMNTSFSDIELLEDSGIPTEAFLASCYAVVPVLDKLGPTVFAPVKMD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 WEEGKEVIPTFFSTMNTSFSDIELLEDSGIPTEAFLASCYAVVPVLDKLGPTVFAPVKMD 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE6 LVGNIKKVNQKYITNKEEFTTLQKIVLHEVEADVAQVRNSATEALLWLKRGLKFLKGFLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 LVGNIKKVNQKYITNKEEFTTLQKIVLHEVEADVAQVRNSATEALLWLKRGLKFLKGFLT 370 380 390 400 410 420 430 440 pF1KE6 EVKNGEKDIQTALRNPTENT :::::::::::::::::::: CCDS54 EVKNGEKDIQTALRNPTENT 430 440 >>CCDS75574.1 PLEKHA8 gene_id:84725|Hs108|chr7 (459 aa) initn: 2900 init1: 2847 opt: 2847 Z-score: 2969.4 bits: 558.6 E(32554): 4.5e-159 Smith-Waterman score: 2847; 99.8% identity (99.8% similar) in 435 aa overlap (1-435:1-435) 10 20 30 40 50 60 pF1KE6 MEGVLYKWTNYLSGWQPRWFLLCGGILSYYDSPEDAWKGCKGSIQMAVCEIQVHSVDNTR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 MEGVLYKWTNYLSGWQPRWFLLCGGILSYYDSPEDAWKGCKGSIQMAVCEIQVHSVDNTR 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 MDLIIPGEQYFYLKARSVAERQRWLVALGSAKACLTDSRTQKEKEFAENTENLKTKMSEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 MDLIIPGEQYFYLKARSVAERQRWLVALGSAKACLTDSRTQKEKEFAENTENLKTKMSEL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 RLYCDLLVQQVDKTKEVTTTGVSNSEEGIDVGTLLKSTCNTFLKTLEECMQIANAAFTSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 RLYCDLLVQQVDKTKEVTTTGVSNSEEGIDVGTLLKSTCNTFLKTLEECMQIANAAFTSE 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 LLYRTPPGSPQLAMLKSSKMKHPIIPIHNSLERQMELSTCENGSLNMEINGEEEILMKNK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 LLYRTPPGSPQLAMLKSSKMKHPIIPIHNSLERQMELSTCENGSLNMEINGEEEILMKNK 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE6 NSLYLKSAEIDCSISSEENTDDNITVQGEIRKEDGMENLKNHDNNLTQSGSDSSCSPECL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 NSLYLKSAEIDCSISSEENTDDNITVQGEIRKEDGMENLKNHDNNLTQSGSDSSCSPECL 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE6 WEEGKEVIPTFFSTMNTSFSDIELLEDSGIPTEAFLASCYAVVPVLDKLGPTVFAPVKMD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 WEEGKEVIPTFFSTMNTSFSDIELLEDSGIPTEAFLASCYAVVPVLDKLGPTVFAPVKMD 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE6 LVGNIKKVNQKYITNKEEFTTLQKIVLHEVEADVAQVRNSATEALLWLKRGLKFLKGFLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 LVGNIKKVNQKYITNKEEFTTLQKIVLHEVEADVAQVRNSATEALLWLKRGLKFLKGFLT 370 380 390 400 410 420 430 440 pF1KE6 EVKNGEKDIQTALRNPTENT ::::::::::::: : CCDS75 EVKNGEKDIQTALNNAYGKTLRQHHGWVVRGVFAGHTNV 430 440 450 >>CCDS56473.1 PLEKHA8 gene_id:84725|Hs108|chr7 (519 aa) initn: 2900 init1: 2847 opt: 2847 Z-score: 2968.5 bits: 558.7 E(32554): 5e-159 Smith-Waterman score: 2847; 99.8% identity (99.8% similar) in 435 aa overlap (1-435:1-435) 10 20 30 40 50 60 pF1KE6 MEGVLYKWTNYLSGWQPRWFLLCGGILSYYDSPEDAWKGCKGSIQMAVCEIQVHSVDNTR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 MEGVLYKWTNYLSGWQPRWFLLCGGILSYYDSPEDAWKGCKGSIQMAVCEIQVHSVDNTR 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 MDLIIPGEQYFYLKARSVAERQRWLVALGSAKACLTDSRTQKEKEFAENTENLKTKMSEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 MDLIIPGEQYFYLKARSVAERQRWLVALGSAKACLTDSRTQKEKEFAENTENLKTKMSEL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 RLYCDLLVQQVDKTKEVTTTGVSNSEEGIDVGTLLKSTCNTFLKTLEECMQIANAAFTSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 RLYCDLLVQQVDKTKEVTTTGVSNSEEGIDVGTLLKSTCNTFLKTLEECMQIANAAFTSE 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 LLYRTPPGSPQLAMLKSSKMKHPIIPIHNSLERQMELSTCENGSLNMEINGEEEILMKNK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 LLYRTPPGSPQLAMLKSSKMKHPIIPIHNSLERQMELSTCENGSLNMEINGEEEILMKNK 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE6 NSLYLKSAEIDCSISSEENTDDNITVQGEIRKEDGMENLKNHDNNLTQSGSDSSCSPECL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 NSLYLKSAEIDCSISSEENTDDNITVQGEIRKEDGMENLKNHDNNLTQSGSDSSCSPECL 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE6 WEEGKEVIPTFFSTMNTSFSDIELLEDSGIPTEAFLASCYAVVPVLDKLGPTVFAPVKMD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 WEEGKEVIPTFFSTMNTSFSDIELLEDSGIPTEAFLASCYAVVPVLDKLGPTVFAPVKMD 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE6 LVGNIKKVNQKYITNKEEFTTLQKIVLHEVEADVAQVRNSATEALLWLKRGLKFLKGFLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 LVGNIKKVNQKYITNKEEFTTLQKIVLHEVEADVAQVRNSATEALLWLKRGLKFLKGFLT 370 380 390 400 410 420 430 440 pF1KE6 EVKNGEKDIQTALRNPTENT ::::::::::::: : CCDS56 EVKNGEKDIQTALNNAYGKTLRQHHGWVVRGVFALALRAAPSYEDFVAALTVKEGDHQKE 430 440 450 460 470 480 >>CCDS33336.1 PLEKHA3 gene_id:65977|Hs108|chr2 (300 aa) initn: 889 init1: 729 opt: 843 Z-score: 887.2 bits: 172.8 E(32554): 4.3e-43 Smith-Waterman score: 853; 62.0% identity (84.0% similar) in 213 aa overlap (1-203:1-213) 10 20 30 40 50 60 pF1KE6 MEGVLYKWTNYLSGWQPRWFLLCGGILSYYDSPEDAWKGCKGSIQMAVCEIQVHSVDNTR ::::::::::::.:::::::.: .:::::::: .:. :: ::::.::::::.:::.:::: CCDS33 MEGVLYKWTNYLTGWQPRWFVLDNGILSYYDSQDDVCKGSKGSIKMAVCEIKVHSADNTR 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 MDLIIPGEQYFYLKARSVAERQRWLVALGSAKACLTDSRTQKEKEFAENTENLKTKMSEL :.:::::::.::.:: ..::::::::::::.::::::.::.::::..:..:.:::::::: CCDS33 MELIIPGEQHFYMKAVNAAERQRWLVALGSSKACLTDTRTKKEKEISETSESLKTKMSEL 70 80 90 100 110 120 130 140 150 160 170 pF1KE6 RLYCDLLVQQVDKTKEVT---TTGVSNSEEGID-VGTLLKSTCNTFLKTLEECMQIANAA :::::::.::: .: . . : : :... ...::..:::::. :::::..:::: CCDS33 RLYCDLLMQQVHTIQEFVHHDENHSSPSAENMNEASSLLSATCNTFITTLEECVKIANAK 130 140 150 160 170 180 180 190 200 210 220 230 pF1KE6 FTSELL---YRTP---PGSPQLAMLKSSKMKHPIIPIHNSLERQMELSTCENGSLNMEIN : :.. . : : ::. ... . ...:: CCDS33 FKPEMFQLHHPDPLVSPVSPSPVQMMKRSVSHPGSCSSERSSHSIKEPVSTLHRLSQRRR 190 200 210 220 230 240 240 250 260 270 280 290 pF1KE6 GEEEILMKNKNSLYLKSAEIDCSISSEENTDDNITVQGEIRKEDGMENLKNHDNNLTQSG CCDS33 RTYSDTDSCSDIPLEDPDRPVHCSKNTLNGDLASATIPEESRLMAKKQSESEDTLPSFSS 250 260 270 280 290 300 >>CCDS55598.1 OSBPL9 gene_id:114883|Hs108|chr1 (723 aa) initn: 217 init1: 119 opt: 290 Z-score: 306.1 bits: 66.5 E(32554): 1e-10 Smith-Waterman score: 290; 26.7% identity (61.9% similar) in 210 aa overlap (1-203:5-211) 10 20 30 40 50 pF1KE6 MEGVLYKWTNYLSGWQPRWFLL--CGGILSYYDSPEDAWKGCK-GSIQMAVCEIQV ::: : :::: ..::: :::.: .:.:::: : . .: . : ... : . CCDS55 MASIMEGPLSKWTNVMKGWQYRWFVLDYNAGLLSYYTSKDKMMRGSRRGCVRLRGAVIGI 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE6 HSVDNTRMDLIIPGEQYFYLKARSVAERQRWLVALGSAKACLTDSRTQKEKEFAENTENL . :.. . . . .. :...::.. ::..:. :: . : . .. :. ..... CCDS55 DDEDDSTFTITVD-QKTFHFQARDADEREKWIHALEETILRHTLQLQGLDSGFVPSVQDF 70 80 90 100 110 120 130 140 150 160 170 pF1KE6 KTKMSELRLYCDLLVQQVDKTKEVTTTGVSNSEEGIDVGTLLKSTCNTFLKTLEEC---M :..: : ..:..:. : . . ...:. . :: : : :........: . CCDS55 DKKLTEADAYLQILIEQL-KLFDDKLQNCKEDEQRKKIETL-KETTNSMVESIKHCIVLL 120 130 140 150 160 170 180 190 200 210 220 pF1KE6 QIANAAFTS-ELLYRTPPGSPQLAMLKSSKMKHPIIPIHNSLERQMELSTCENGSLNMEI :::..... . .:. : : .. . :. . : CCDS55 QIAKSTINPVDAIYQPSPLEPVISTMPSQTVLPPEPVQLCKSEQRPSSLPVGPVLATLGH 180 190 200 210 220 230 230 240 250 260 270 280 pF1KE6 NGEEEILMKNKNSLYLKSAEIDCSISSEENTDDNITVQGEIRKEDGMENLKNHDNNLTQS CCDS55 HQTPTPNSTGSGHSPPSSSLTSPSHVNLSPNTVPEFSYSSSEDEFYDADEFHQSGSSPKR 240 250 260 270 280 290 440 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 12:06:02 2016 done: Tue Nov 8 12:06:02 2016 Total Scan time: 1.820 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]