Result of FASTA (omim) for
pFN21AE4461
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE4461, 477 aa
1>>>pF1KE4461 477 - 477 aa - 477 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.2345+/-0.000313; mu= 19.3200+/- 0.020
mean_var=82.3038+/-17.294, 0's: 0 Z-trim(116.7): 52 B-trim: 0 in 0/52
Lambda= 0.141372
statistics sampled from 27939 (27994) to 27939 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.68), E-opt: 0.2 (0.328), width: 16
Scan time: 10.870
The best scores are: opt bits E(85289)
NP_001116236 (OMIM: 176200,600923) protoporphyrino ( 477) 3169 656.1 6.3e-188
NP_000300 (OMIM: 176200,600923) protoporphyrinogen ( 477) 3169 656.1 6.3e-188
XP_011507973 (OMIM: 176200,600923) PREDICTED: prot ( 515) 3169 656.1 6.6e-188
XP_006711467 (OMIM: 176200,600923) PREDICTED: prot ( 520) 3149 652.0 1.1e-186
XP_005245348 (OMIM: 176200,600923) PREDICTED: prot ( 524) 2761 572.9 7.5e-163
XP_006711466 (OMIM: 176200,600923) PREDICTED: prot ( 524) 2761 572.9 7.5e-163
XP_011507966 (OMIM: 176200,600923) PREDICTED: prot ( 562) 2761 572.9 7.9e-163
XP_006711465 (OMIM: 176200,600923) PREDICTED: prot ( 529) 2741 568.8 1.3e-161
XP_011507970 (OMIM: 176200,600923) PREDICTED: prot ( 529) 2741 568.8 1.3e-161
XP_011507969 (OMIM: 176200,600923) PREDICTED: prot ( 529) 2741 568.8 1.3e-161
XP_011507971 (OMIM: 176200,600923) PREDICTED: prot ( 529) 2741 568.8 1.3e-161
XP_011507967 (OMIM: 176200,600923) PREDICTED: prot ( 536) 2741 568.8 1.3e-161
XP_011507965 (OMIM: 176200,600923) PREDICTED: prot ( 567) 2741 568.8 1.4e-161
XP_016857049 (OMIM: 176200,600923) PREDICTED: prot ( 440) 2169 452.1 1.5e-126
XP_016857048 (OMIM: 176200,600923) PREDICTED: prot ( 483) 2149 448.0 2.7e-125
XP_011507968 (OMIM: 176200,600923) PREDICTED: prot ( 530) 2149 448.1 2.9e-125
XP_016857056 (OMIM: 176200,600923) PREDICTED: prot ( 341) 2106 439.1 9e-123
XP_016857055 (OMIM: 176200,600923) PREDICTED: prot ( 341) 2106 439.1 9e-123
XP_016857054 (OMIM: 176200,600923) PREDICTED: prot ( 341) 2106 439.1 9e-123
XP_011507977 (OMIM: 176200,600923) PREDICTED: prot ( 444) 2106 439.2 1.1e-122
XP_011507974 (OMIM: 176200,600923) PREDICTED: prot ( 482) 2106 439.2 1.2e-122
XP_016857058 (OMIM: 176200,600923) PREDICTED: prot ( 315) 2080 433.8 3.4e-121
XP_016857057 (OMIM: 176200,600923) PREDICTED: prot ( 315) 2080 433.8 3.4e-121
XP_016857050 (OMIM: 176200,600923) PREDICTED: prot ( 438) 2023 422.3 1.4e-117
XP_011507976 (OMIM: 176200,600923) PREDICTED: prot ( 470) 1807 378.3 2.6e-104
XP_011507975 (OMIM: 176200,600923) PREDICTED: prot ( 479) 1704 357.3 5.6e-98
XP_011507979 (OMIM: 176200,600923) PREDICTED: prot ( 388) 1698 356.0 1.1e-97
XP_011507981 (OMIM: 176200,600923) PREDICTED: prot ( 388) 1698 356.0 1.1e-97
XP_006711469 (OMIM: 176200,600923) PREDICTED: prot ( 388) 1698 356.0 1.1e-97
XP_011507980 (OMIM: 176200,600923) PREDICTED: prot ( 388) 1698 356.0 1.1e-97
XP_011507978 (OMIM: 176200,600923) PREDICTED: prot ( 388) 1698 356.0 1.1e-97
XP_016857051 (OMIM: 176200,600923) PREDICTED: prot ( 388) 1698 356.0 1.1e-97
XP_005245352 (OMIM: 176200,600923) PREDICTED: prot ( 388) 1698 356.0 1.1e-97
XP_011507972 (OMIM: 176200,600923) PREDICTED: prot ( 529) 1698 356.1 1.4e-97
XP_011507983 (OMIM: 176200,600923) PREDICTED: prot ( 362) 1672 350.6 4.2e-96
XP_016857052 (OMIM: 176200,600923) PREDICTED: prot ( 362) 1672 350.6 4.2e-96
XP_016857053 (OMIM: 176200,600923) PREDICTED: prot ( 362) 1672 350.6 4.2e-96
XP_016857059 (OMIM: 176200,600923) PREDICTED: prot ( 290) 1186 251.4 2.4e-66
XP_011507984 (OMIM: 176200,600923) PREDICTED: prot ( 290) 1186 251.4 2.4e-66
XP_016857060 (OMIM: 176200,600923) PREDICTED: prot ( 270) 498 111.1 4e-24
>>NP_001116236 (OMIM: 176200,600923) protoporphyrinogen (477 aa)
initn: 3169 init1: 3169 opt: 3169 Z-score: 3494.9 bits: 656.1 E(85289): 6.3e-188
Smith-Waterman score: 3169; 100.0% identity (100.0% similar) in 477 aa overlap (1-477:1-477)
10 20 30 40 50 60
pF1KE4 MGRTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGGWIRSVRGPNGAIFELGPRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MGRTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGGWIRSVRGPNGAIFELGPRG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 IRPAGALGARTLLLVSELGLDSEVLPVRGDHPAAQNRFLYVGGALHALPTGLRGLLRPSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IRPAGALGARTLLLVSELGLDSEVLPVRGDHPAAQNRFLYVGGALHALPTGLRGLLRPSP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 PFSKPLFWAGLRELTKPRGKEPDETVHSFAQRRLGPEVASLAMDSLCRGVFAGNSRELSI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PFSKPLFWAGLRELTKPRGKEPDETVHSFAQRRLGPEVASLAMDSLCRGVFAGNSRELSI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE4 RSCFPSLFQAEQTHRSILLGLLLGAGRTPQPDSALIRQALAERWSQWSLRGGLEMLPQAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RSCFPSLFQAEQTHRSILLGLLLGAGRTPQPDSALIRQALAERWSQWSLRGGLEMLPQAL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE4 ETHLTSRGVSVLRGQPVCGLSLQAEGRWKVSLRDSSLEADHVISAIPASVLSELLPAEAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ETHLTSRGVSVLRGQPVCGLSLQAEGRWKVSLRDSSLEADHVISAIPASVLSELLPAEAA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE4 PLARALSAITAVSVAVVNLQYQGAHLPVQGFGHLVPSSEDPGVLGIVYDSVAFPEQDGSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PLARALSAITAVSVAVVNLQYQGAHLPVQGFGHLVPSSEDPGVLGIVYDSVAFPEQDGSP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE4 PGLRVTVMLGGSWLQTLEASGCVLSQELFQQRAQEAAATQLGLKEMPSHCLVHLHKNCIP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PGLRVTVMLGGSWLQTLEASGCVLSQELFQQRAQEAAATQLGLKEMPSHCLVHLHKNCIP
370 380 390 400 410 420
430 440 450 460 470
pF1KE4 QYTLGHWQKLESARQFLTAHRLPLTLAGASYEGVAVNDCIESGRQAAVSVLGTEPNS
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QYTLGHWQKLESARQFLTAHRLPLTLAGASYEGVAVNDCIESGRQAAVSVLGTEPNS
430 440 450 460 470
>>NP_000300 (OMIM: 176200,600923) protoporphyrinogen oxi (477 aa)
initn: 3169 init1: 3169 opt: 3169 Z-score: 3494.9 bits: 656.1 E(85289): 6.3e-188
Smith-Waterman score: 3169; 100.0% identity (100.0% similar) in 477 aa overlap (1-477:1-477)
10 20 30 40 50 60
pF1KE4 MGRTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGGWIRSVRGPNGAIFELGPRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 MGRTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGGWIRSVRGPNGAIFELGPRG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 IRPAGALGARTLLLVSELGLDSEVLPVRGDHPAAQNRFLYVGGALHALPTGLRGLLRPSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 IRPAGALGARTLLLVSELGLDSEVLPVRGDHPAAQNRFLYVGGALHALPTGLRGLLRPSP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 PFSKPLFWAGLRELTKPRGKEPDETVHSFAQRRLGPEVASLAMDSLCRGVFAGNSRELSI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 PFSKPLFWAGLRELTKPRGKEPDETVHSFAQRRLGPEVASLAMDSLCRGVFAGNSRELSI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE4 RSCFPSLFQAEQTHRSILLGLLLGAGRTPQPDSALIRQALAERWSQWSLRGGLEMLPQAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 RSCFPSLFQAEQTHRSILLGLLLGAGRTPQPDSALIRQALAERWSQWSLRGGLEMLPQAL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE4 ETHLTSRGVSVLRGQPVCGLSLQAEGRWKVSLRDSSLEADHVISAIPASVLSELLPAEAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 ETHLTSRGVSVLRGQPVCGLSLQAEGRWKVSLRDSSLEADHVISAIPASVLSELLPAEAA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE4 PLARALSAITAVSVAVVNLQYQGAHLPVQGFGHLVPSSEDPGVLGIVYDSVAFPEQDGSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 PLARALSAITAVSVAVVNLQYQGAHLPVQGFGHLVPSSEDPGVLGIVYDSVAFPEQDGSP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE4 PGLRVTVMLGGSWLQTLEASGCVLSQELFQQRAQEAAATQLGLKEMPSHCLVHLHKNCIP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 PGLRVTVMLGGSWLQTLEASGCVLSQELFQQRAQEAAATQLGLKEMPSHCLVHLHKNCIP
370 380 390 400 410 420
430 440 450 460 470
pF1KE4 QYTLGHWQKLESARQFLTAHRLPLTLAGASYEGVAVNDCIESGRQAAVSVLGTEPNS
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 QYTLGHWQKLESARQFLTAHRLPLTLAGASYEGVAVNDCIESGRQAAVSVLGTEPNS
430 440 450 460 470
>>XP_011507973 (OMIM: 176200,600923) PREDICTED: protopor (515 aa)
initn: 3169 init1: 3169 opt: 3169 Z-score: 3494.5 bits: 656.1 E(85289): 6.6e-188
Smith-Waterman score: 3169; 100.0% identity (100.0% similar) in 477 aa overlap (1-477:39-515)
10 20 30
pF1KE4 MGRTVVVLGGGISGLAASYHLSRAPCPPKV
::::::::::::::::::::::::::::::
XP_011 ALSVPIYSPYDQSSCGLPSRVVTLAGPGFRMGRTVVVLGGGISGLAASYHLSRAPCPPKV
10 20 30 40 50 60
40 50 60 70 80 90
pF1KE4 VLVESSERLGGWIRSVRGPNGAIFELGPRGIRPAGALGARTLLLVSELGLDSEVLPVRGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VLVESSERLGGWIRSVRGPNGAIFELGPRGIRPAGALGARTLLLVSELGLDSEVLPVRGD
70 80 90 100 110 120
100 110 120 130 140 150
pF1KE4 HPAAQNRFLYVGGALHALPTGLRGLLRPSPPFSKPLFWAGLRELTKPRGKEPDETVHSFA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HPAAQNRFLYVGGALHALPTGLRGLLRPSPPFSKPLFWAGLRELTKPRGKEPDETVHSFA
130 140 150 160 170 180
160 170 180 190 200 210
pF1KE4 QRRLGPEVASLAMDSLCRGVFAGNSRELSIRSCFPSLFQAEQTHRSILLGLLLGAGRTPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QRRLGPEVASLAMDSLCRGVFAGNSRELSIRSCFPSLFQAEQTHRSILLGLLLGAGRTPQ
190 200 210 220 230 240
220 230 240 250 260 270
pF1KE4 PDSALIRQALAERWSQWSLRGGLEMLPQALETHLTSRGVSVLRGQPVCGLSLQAEGRWKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PDSALIRQALAERWSQWSLRGGLEMLPQALETHLTSRGVSVLRGQPVCGLSLQAEGRWKV
250 260 270 280 290 300
280 290 300 310 320 330
pF1KE4 SLRDSSLEADHVISAIPASVLSELLPAEAAPLARALSAITAVSVAVVNLQYQGAHLPVQG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SLRDSSLEADHVISAIPASVLSELLPAEAAPLARALSAITAVSVAVVNLQYQGAHLPVQG
310 320 330 340 350 360
340 350 360 370 380 390
pF1KE4 FGHLVPSSEDPGVLGIVYDSVAFPEQDGSPPGLRVTVMLGGSWLQTLEASGCVLSQELFQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FGHLVPSSEDPGVLGIVYDSVAFPEQDGSPPGLRVTVMLGGSWLQTLEASGCVLSQELFQ
370 380 390 400 410 420
400 410 420 430 440 450
pF1KE4 QRAQEAAATQLGLKEMPSHCLVHLHKNCIPQYTLGHWQKLESARQFLTAHRLPLTLAGAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QRAQEAAATQLGLKEMPSHCLVHLHKNCIPQYTLGHWQKLESARQFLTAHRLPLTLAGAS
430 440 450 460 470 480
460 470
pF1KE4 YEGVAVNDCIESGRQAAVSVLGTEPNS
:::::::::::::::::::::::::::
XP_011 YEGVAVNDCIESGRQAAVSVLGTEPNS
490 500 510
>>XP_006711467 (OMIM: 176200,600923) PREDICTED: protopor (520 aa)
initn: 3155 init1: 2677 opt: 3149 Z-score: 3472.4 bits: 652.0 E(85289): 1.1e-186
Smith-Waterman score: 3149; 99.0% identity (99.0% similar) in 482 aa overlap (1-477:39-520)
10 20 30
pF1KE4 MGRTVVVLGGGISGLAASYHLSRAPCPPKV
::::::::::::::::::::::::::::::
XP_006 ALSVPIYSPYDQSSCGLPSRVVTLAGPGFRMGRTVVVLGGGISGLAASYHLSRAPCPPKV
10 20 30 40 50 60
40 50 60 70 80
pF1KE4 VLVESSERLGGWIRSVRGPNGAIFELGPRGIRPAGALGARTLLL-----VSELGLDSEVL
:::::::::::::::::::::::::::::::::::::::::::: :::::::::::
XP_006 VLVESSERLGGWIRSVRGPNGAIFELGPRGIRPAGALGARTLLLACGEQVSELGLDSEVL
70 80 90 100 110 120
90 100 110 120 130 140
pF1KE4 PVRGDHPAAQNRFLYVGGALHALPTGLRGLLRPSPPFSKPLFWAGLRELTKPRGKEPDET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PVRGDHPAAQNRFLYVGGALHALPTGLRGLLRPSPPFSKPLFWAGLRELTKPRGKEPDET
130 140 150 160 170 180
150 160 170 180 190 200
pF1KE4 VHSFAQRRLGPEVASLAMDSLCRGVFAGNSRELSIRSCFPSLFQAEQTHRSILLGLLLGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 VHSFAQRRLGPEVASLAMDSLCRGVFAGNSRELSIRSCFPSLFQAEQTHRSILLGLLLGA
190 200 210 220 230 240
210 220 230 240 250 260
pF1KE4 GRTPQPDSALIRQALAERWSQWSLRGGLEMLPQALETHLTSRGVSVLRGQPVCGLSLQAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GRTPQPDSALIRQALAERWSQWSLRGGLEMLPQALETHLTSRGVSVLRGQPVCGLSLQAE
250 260 270 280 290 300
270 280 290 300 310 320
pF1KE4 GRWKVSLRDSSLEADHVISAIPASVLSELLPAEAAPLARALSAITAVSVAVVNLQYQGAH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GRWKVSLRDSSLEADHVISAIPASVLSELLPAEAAPLARALSAITAVSVAVVNLQYQGAH
310 320 330 340 350 360
330 340 350 360 370 380
pF1KE4 LPVQGFGHLVPSSEDPGVLGIVYDSVAFPEQDGSPPGLRVTVMLGGSWLQTLEASGCVLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LPVQGFGHLVPSSEDPGVLGIVYDSVAFPEQDGSPPGLRVTVMLGGSWLQTLEASGCVLS
370 380 390 400 410 420
390 400 410 420 430 440
pF1KE4 QELFQQRAQEAAATQLGLKEMPSHCLVHLHKNCIPQYTLGHWQKLESARQFLTAHRLPLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 QELFQQRAQEAAATQLGLKEMPSHCLVHLHKNCIPQYTLGHWQKLESARQFLTAHRLPLT
430 440 450 460 470 480
450 460 470
pF1KE4 LAGASYEGVAVNDCIESGRQAAVSVLGTEPNS
::::::::::::::::::::::::::::::::
XP_006 LAGASYEGVAVNDCIESGRQAAVSVLGTEPNS
490 500 510 520
>>XP_005245348 (OMIM: 176200,600923) PREDICTED: protopor (524 aa)
initn: 2761 init1: 2761 opt: 2761 Z-score: 3044.6 bits: 572.9 E(85289): 7.5e-163
Smith-Waterman score: 2761; 100.0% identity (100.0% similar) in 416 aa overlap (1-416:1-416)
10 20 30 40 50 60
pF1KE4 MGRTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGGWIRSVRGPNGAIFELGPRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MGRTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGGWIRSVRGPNGAIFELGPRG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 IRPAGALGARTLLLVSELGLDSEVLPVRGDHPAAQNRFLYVGGALHALPTGLRGLLRPSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 IRPAGALGARTLLLVSELGLDSEVLPVRGDHPAAQNRFLYVGGALHALPTGLRGLLRPSP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 PFSKPLFWAGLRELTKPRGKEPDETVHSFAQRRLGPEVASLAMDSLCRGVFAGNSRELSI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PFSKPLFWAGLRELTKPRGKEPDETVHSFAQRRLGPEVASLAMDSLCRGVFAGNSRELSI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE4 RSCFPSLFQAEQTHRSILLGLLLGAGRTPQPDSALIRQALAERWSQWSLRGGLEMLPQAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RSCFPSLFQAEQTHRSILLGLLLGAGRTPQPDSALIRQALAERWSQWSLRGGLEMLPQAL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE4 ETHLTSRGVSVLRGQPVCGLSLQAEGRWKVSLRDSSLEADHVISAIPASVLSELLPAEAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ETHLTSRGVSVLRGQPVCGLSLQAEGRWKVSLRDSSLEADHVISAIPASVLSELLPAEAA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE4 PLARALSAITAVSVAVVNLQYQGAHLPVQGFGHLVPSSEDPGVLGIVYDSVAFPEQDGSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PLARALSAITAVSVAVVNLQYQGAHLPVQGFGHLVPSSEDPGVLGIVYDSVAFPEQDGSP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE4 PGLRVTVMLGGSWLQTLEASGCVLSQELFQQRAQEAAATQLGLKEMPSHCLVHLHKNCIP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PGLRVTVMLGGSWLQTLEASGCVLSQELFQQRAQEAAATQLGLKEMPSHCLVHLHKTKNQ
370 380 390 400 410 420
430 440 450 460 470
pF1KE4 QYTLGHWQKLESARQFLTAHRLPLTLAGASYEGVAVNDCIESGRQAAVSVLGTEPNS
XP_005 LKWRQSHDRTVEWPKEYPGRSRKQAPSILHVPGCQLLRCRDRDHLGAASVSTHSQRTYLV
430 440 450 460 470 480
>>XP_006711466 (OMIM: 176200,600923) PREDICTED: protopor (524 aa)
initn: 2761 init1: 2761 opt: 2761 Z-score: 3044.6 bits: 572.9 E(85289): 7.5e-163
Smith-Waterman score: 2761; 100.0% identity (100.0% similar) in 416 aa overlap (1-416:1-416)
10 20 30 40 50 60
pF1KE4 MGRTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGGWIRSVRGPNGAIFELGPRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MGRTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGGWIRSVRGPNGAIFELGPRG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 IRPAGALGARTLLLVSELGLDSEVLPVRGDHPAAQNRFLYVGGALHALPTGLRGLLRPSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 IRPAGALGARTLLLVSELGLDSEVLPVRGDHPAAQNRFLYVGGALHALPTGLRGLLRPSP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 PFSKPLFWAGLRELTKPRGKEPDETVHSFAQRRLGPEVASLAMDSLCRGVFAGNSRELSI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PFSKPLFWAGLRELTKPRGKEPDETVHSFAQRRLGPEVASLAMDSLCRGVFAGNSRELSI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE4 RSCFPSLFQAEQTHRSILLGLLLGAGRTPQPDSALIRQALAERWSQWSLRGGLEMLPQAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 RSCFPSLFQAEQTHRSILLGLLLGAGRTPQPDSALIRQALAERWSQWSLRGGLEMLPQAL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE4 ETHLTSRGVSVLRGQPVCGLSLQAEGRWKVSLRDSSLEADHVISAIPASVLSELLPAEAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 ETHLTSRGVSVLRGQPVCGLSLQAEGRWKVSLRDSSLEADHVISAIPASVLSELLPAEAA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE4 PLARALSAITAVSVAVVNLQYQGAHLPVQGFGHLVPSSEDPGVLGIVYDSVAFPEQDGSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PLARALSAITAVSVAVVNLQYQGAHLPVQGFGHLVPSSEDPGVLGIVYDSVAFPEQDGSP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE4 PGLRVTVMLGGSWLQTLEASGCVLSQELFQQRAQEAAATQLGLKEMPSHCLVHLHKNCIP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PGLRVTVMLGGSWLQTLEASGCVLSQELFQQRAQEAAATQLGLKEMPSHCLVHLHKTKNQ
370 380 390 400 410 420
430 440 450 460 470
pF1KE4 QYTLGHWQKLESARQFLTAHRLPLTLAGASYEGVAVNDCIESGRQAAVSVLGTEPNS
XP_006 LKWRQSHDRTVEWPKEYPGRSRKQAPSILHVPGCQLLRCRDRDHLGAASVSTHSQRTYLV
430 440 450 460 470 480
>>XP_011507966 (OMIM: 176200,600923) PREDICTED: protopor (562 aa)
initn: 2761 init1: 2761 opt: 2761 Z-score: 3044.2 bits: 572.9 E(85289): 7.9e-163
Smith-Waterman score: 2761; 100.0% identity (100.0% similar) in 416 aa overlap (1-416:39-454)
10 20 30
pF1KE4 MGRTVVVLGGGISGLAASYHLSRAPCPPKV
::::::::::::::::::::::::::::::
XP_011 ALSVPIYSPYDQSSCGLPSRVVTLAGPGFRMGRTVVVLGGGISGLAASYHLSRAPCPPKV
10 20 30 40 50 60
40 50 60 70 80 90
pF1KE4 VLVESSERLGGWIRSVRGPNGAIFELGPRGIRPAGALGARTLLLVSELGLDSEVLPVRGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VLVESSERLGGWIRSVRGPNGAIFELGPRGIRPAGALGARTLLLVSELGLDSEVLPVRGD
70 80 90 100 110 120
100 110 120 130 140 150
pF1KE4 HPAAQNRFLYVGGALHALPTGLRGLLRPSPPFSKPLFWAGLRELTKPRGKEPDETVHSFA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HPAAQNRFLYVGGALHALPTGLRGLLRPSPPFSKPLFWAGLRELTKPRGKEPDETVHSFA
130 140 150 160 170 180
160 170 180 190 200 210
pF1KE4 QRRLGPEVASLAMDSLCRGVFAGNSRELSIRSCFPSLFQAEQTHRSILLGLLLGAGRTPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QRRLGPEVASLAMDSLCRGVFAGNSRELSIRSCFPSLFQAEQTHRSILLGLLLGAGRTPQ
190 200 210 220 230 240
220 230 240 250 260 270
pF1KE4 PDSALIRQALAERWSQWSLRGGLEMLPQALETHLTSRGVSVLRGQPVCGLSLQAEGRWKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PDSALIRQALAERWSQWSLRGGLEMLPQALETHLTSRGVSVLRGQPVCGLSLQAEGRWKV
250 260 270 280 290 300
280 290 300 310 320 330
pF1KE4 SLRDSSLEADHVISAIPASVLSELLPAEAAPLARALSAITAVSVAVVNLQYQGAHLPVQG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SLRDSSLEADHVISAIPASVLSELLPAEAAPLARALSAITAVSVAVVNLQYQGAHLPVQG
310 320 330 340 350 360
340 350 360 370 380 390
pF1KE4 FGHLVPSSEDPGVLGIVYDSVAFPEQDGSPPGLRVTVMLGGSWLQTLEASGCVLSQELFQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FGHLVPSSEDPGVLGIVYDSVAFPEQDGSPPGLRVTVMLGGSWLQTLEASGCVLSQELFQ
370 380 390 400 410 420
400 410 420 430 440 450
pF1KE4 QRAQEAAATQLGLKEMPSHCLVHLHKNCIPQYTLGHWQKLESARQFLTAHRLPLTLAGAS
::::::::::::::::::::::::::
XP_011 QRAQEAAATQLGLKEMPSHCLVHLHKTKNQLKWRQSHDRTVEWPKEYPGRSRKQAPSILH
430 440 450 460 470 480
>>XP_006711465 (OMIM: 176200,600923) PREDICTED: protopor (529 aa)
initn: 2747 init1: 2269 opt: 2741 Z-score: 3022.5 bits: 568.8 E(85289): 1.3e-161
Smith-Waterman score: 2741; 98.8% identity (98.8% similar) in 421 aa overlap (1-416:1-421)
10 20 30 40 50 60
pF1KE4 MGRTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGGWIRSVRGPNGAIFELGPRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MGRTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGGWIRSVRGPNGAIFELGPRG
10 20 30 40 50 60
70 80 90 100 110
pF1KE4 IRPAGALGARTLLL-----VSELGLDSEVLPVRGDHPAAQNRFLYVGGALHALPTGLRGL
:::::::::::::: :::::::::::::::::::::::::::::::::::::::::
XP_006 IRPAGALGARTLLLACGEQVSELGLDSEVLPVRGDHPAAQNRFLYVGGALHALPTGLRGL
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE4 LRPSPPFSKPLFWAGLRELTKPRGKEPDETVHSFAQRRLGPEVASLAMDSLCRGVFAGNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LRPSPPFSKPLFWAGLRELTKPRGKEPDETVHSFAQRRLGPEVASLAMDSLCRGVFAGNS
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE4 RELSIRSCFPSLFQAEQTHRSILLGLLLGAGRTPQPDSALIRQALAERWSQWSLRGGLEM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 RELSIRSCFPSLFQAEQTHRSILLGLLLGAGRTPQPDSALIRQALAERWSQWSLRGGLEM
190 200 210 220 230 240
240 250 260 270 280 290
pF1KE4 LPQALETHLTSRGVSVLRGQPVCGLSLQAEGRWKVSLRDSSLEADHVISAIPASVLSELL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LPQALETHLTSRGVSVLRGQPVCGLSLQAEGRWKVSLRDSSLEADHVISAIPASVLSELL
250 260 270 280 290 300
300 310 320 330 340 350
pF1KE4 PAEAAPLARALSAITAVSVAVVNLQYQGAHLPVQGFGHLVPSSEDPGVLGIVYDSVAFPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PAEAAPLARALSAITAVSVAVVNLQYQGAHLPVQGFGHLVPSSEDPGVLGIVYDSVAFPE
310 320 330 340 350 360
360 370 380 390 400 410
pF1KE4 QDGSPPGLRVTVMLGGSWLQTLEASGCVLSQELFQQRAQEAAATQLGLKEMPSHCLVHLH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 QDGSPPGLRVTVMLGGSWLQTLEASGCVLSQELFQQRAQEAAATQLGLKEMPSHCLVHLH
370 380 390 400 410 420
420 430 440 450 460 470
pF1KE4 KNCIPQYTLGHWQKLESARQFLTAHRLPLTLAGASYEGVAVNDCIESGRQAAVSVLGTEP
:
XP_006 KTKNQLKWRQSHDRTVEWPKEYPGRSRKQAPSILHVPGCQLLRCRDRDHLGAASVSTHSQ
430 440 450 460 470 480
>>XP_011507970 (OMIM: 176200,600923) PREDICTED: protopor (529 aa)
initn: 2747 init1: 2269 opt: 2741 Z-score: 3022.5 bits: 568.8 E(85289): 1.3e-161
Smith-Waterman score: 2741; 98.8% identity (98.8% similar) in 421 aa overlap (1-416:1-421)
10 20 30 40 50 60
pF1KE4 MGRTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGGWIRSVRGPNGAIFELGPRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MGRTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGGWIRSVRGPNGAIFELGPRG
10 20 30 40 50 60
70 80 90 100 110
pF1KE4 IRPAGALGARTLLL-----VSELGLDSEVLPVRGDHPAAQNRFLYVGGALHALPTGLRGL
:::::::::::::: :::::::::::::::::::::::::::::::::::::::::
XP_011 IRPAGALGARTLLLACGEQVSELGLDSEVLPVRGDHPAAQNRFLYVGGALHALPTGLRGL
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE4 LRPSPPFSKPLFWAGLRELTKPRGKEPDETVHSFAQRRLGPEVASLAMDSLCRGVFAGNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LRPSPPFSKPLFWAGLRELTKPRGKEPDETVHSFAQRRLGPEVASLAMDSLCRGVFAGNS
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE4 RELSIRSCFPSLFQAEQTHRSILLGLLLGAGRTPQPDSALIRQALAERWSQWSLRGGLEM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RELSIRSCFPSLFQAEQTHRSILLGLLLGAGRTPQPDSALIRQALAERWSQWSLRGGLEM
190 200 210 220 230 240
240 250 260 270 280 290
pF1KE4 LPQALETHLTSRGVSVLRGQPVCGLSLQAEGRWKVSLRDSSLEADHVISAIPASVLSELL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LPQALETHLTSRGVSVLRGQPVCGLSLQAEGRWKVSLRDSSLEADHVISAIPASVLSELL
250 260 270 280 290 300
300 310 320 330 340 350
pF1KE4 PAEAAPLARALSAITAVSVAVVNLQYQGAHLPVQGFGHLVPSSEDPGVLGIVYDSVAFPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PAEAAPLARALSAITAVSVAVVNLQYQGAHLPVQGFGHLVPSSEDPGVLGIVYDSVAFPE
310 320 330 340 350 360
360 370 380 390 400 410
pF1KE4 QDGSPPGLRVTVMLGGSWLQTLEASGCVLSQELFQQRAQEAAATQLGLKEMPSHCLVHLH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QDGSPPGLRVTVMLGGSWLQTLEASGCVLSQELFQQRAQEAAATQLGLKEMPSHCLVHLH
370 380 390 400 410 420
420 430 440 450 460 470
pF1KE4 KNCIPQYTLGHWQKLESARQFLTAHRLPLTLAGASYEGVAVNDCIESGRQAAVSVLGTEP
:
XP_011 KTKNQLKWRQSHDRTVEWPKEYPGRSRKQAPSILHVPGCQLLRCRDRDHLGAASVSTHSQ
430 440 450 460 470 480
>>XP_011507969 (OMIM: 176200,600923) PREDICTED: protopor (529 aa)
initn: 2747 init1: 2269 opt: 2741 Z-score: 3022.5 bits: 568.8 E(85289): 1.3e-161
Smith-Waterman score: 2741; 98.8% identity (98.8% similar) in 421 aa overlap (1-416:1-421)
10 20 30 40 50 60
pF1KE4 MGRTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGGWIRSVRGPNGAIFELGPRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MGRTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGGWIRSVRGPNGAIFELGPRG
10 20 30 40 50 60
70 80 90 100 110
pF1KE4 IRPAGALGARTLLL-----VSELGLDSEVLPVRGDHPAAQNRFLYVGGALHALPTGLRGL
:::::::::::::: :::::::::::::::::::::::::::::::::::::::::
XP_011 IRPAGALGARTLLLACGEQVSELGLDSEVLPVRGDHPAAQNRFLYVGGALHALPTGLRGL
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE4 LRPSPPFSKPLFWAGLRELTKPRGKEPDETVHSFAQRRLGPEVASLAMDSLCRGVFAGNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LRPSPPFSKPLFWAGLRELTKPRGKEPDETVHSFAQRRLGPEVASLAMDSLCRGVFAGNS
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE4 RELSIRSCFPSLFQAEQTHRSILLGLLLGAGRTPQPDSALIRQALAERWSQWSLRGGLEM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RELSIRSCFPSLFQAEQTHRSILLGLLLGAGRTPQPDSALIRQALAERWSQWSLRGGLEM
190 200 210 220 230 240
240 250 260 270 280 290
pF1KE4 LPQALETHLTSRGVSVLRGQPVCGLSLQAEGRWKVSLRDSSLEADHVISAIPASVLSELL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LPQALETHLTSRGVSVLRGQPVCGLSLQAEGRWKVSLRDSSLEADHVISAIPASVLSELL
250 260 270 280 290 300
300 310 320 330 340 350
pF1KE4 PAEAAPLARALSAITAVSVAVVNLQYQGAHLPVQGFGHLVPSSEDPGVLGIVYDSVAFPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PAEAAPLARALSAITAVSVAVVNLQYQGAHLPVQGFGHLVPSSEDPGVLGIVYDSVAFPE
310 320 330 340 350 360
360 370 380 390 400 410
pF1KE4 QDGSPPGLRVTVMLGGSWLQTLEASGCVLSQELFQQRAQEAAATQLGLKEMPSHCLVHLH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QDGSPPGLRVTVMLGGSWLQTLEASGCVLSQELFQQRAQEAAATQLGLKEMPSHCLVHLH
370 380 390 400 410 420
420 430 440 450 460 470
pF1KE4 KNCIPQYTLGHWQKLESARQFLTAHRLPLTLAGASYEGVAVNDCIESGRQAAVSVLGTEP
:
XP_011 KTKNQLKWRQSHDRTVEWPKEYPGRSRKQAPSILHVPGCQLLRCRDRDHLGAASVSTHSQ
430 440 450 460 470 480
477 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 00:57:52 2016 done: Sun Nov 6 00:57:54 2016
Total Scan time: 10.870 Total Display time: 0.080
Function used was FASTA [36.3.4 Apr, 2011]