FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE4461, 477 aa 1>>>pF1KE4461 477 - 477 aa - 477 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.6653+/-0.000752; mu= 16.5695+/- 0.045 mean_var=78.7375+/-16.453, 0's: 0 Z-trim(109.7): 20 B-trim: 0 in 0/49 Lambda= 0.144538 statistics sampled from 11045 (11061) to 11045 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.7), E-opt: 0.2 (0.34), width: 16 Scan time: 3.600 The best scores are: opt bits E(32554) CCDS1221.1 PPOX gene_id:5498|Hs108|chr1 ( 477) 3169 670.3 1.3e-192 >>CCDS1221.1 PPOX gene_id:5498|Hs108|chr1 (477 aa) initn: 3169 init1: 3169 opt: 3169 Z-score: 3571.7 bits: 670.3 E(32554): 1.3e-192 Smith-Waterman score: 3169; 100.0% identity (100.0% similar) in 477 aa overlap (1-477:1-477) 10 20 30 40 50 60 pF1KE4 MGRTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGGWIRSVRGPNGAIFELGPRG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 MGRTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGGWIRSVRGPNGAIFELGPRG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 IRPAGALGARTLLLVSELGLDSEVLPVRGDHPAAQNRFLYVGGALHALPTGLRGLLRPSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 IRPAGALGARTLLLVSELGLDSEVLPVRGDHPAAQNRFLYVGGALHALPTGLRGLLRPSP 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 PFSKPLFWAGLRELTKPRGKEPDETVHSFAQRRLGPEVASLAMDSLCRGVFAGNSRELSI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 PFSKPLFWAGLRELTKPRGKEPDETVHSFAQRRLGPEVASLAMDSLCRGVFAGNSRELSI 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 RSCFPSLFQAEQTHRSILLGLLLGAGRTPQPDSALIRQALAERWSQWSLRGGLEMLPQAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 RSCFPSLFQAEQTHRSILLGLLLGAGRTPQPDSALIRQALAERWSQWSLRGGLEMLPQAL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 ETHLTSRGVSVLRGQPVCGLSLQAEGRWKVSLRDSSLEADHVISAIPASVLSELLPAEAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 ETHLTSRGVSVLRGQPVCGLSLQAEGRWKVSLRDSSLEADHVISAIPASVLSELLPAEAA 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE4 PLARALSAITAVSVAVVNLQYQGAHLPVQGFGHLVPSSEDPGVLGIVYDSVAFPEQDGSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 PLARALSAITAVSVAVVNLQYQGAHLPVQGFGHLVPSSEDPGVLGIVYDSVAFPEQDGSP 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE4 PGLRVTVMLGGSWLQTLEASGCVLSQELFQQRAQEAAATQLGLKEMPSHCLVHLHKNCIP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 PGLRVTVMLGGSWLQTLEASGCVLSQELFQQRAQEAAATQLGLKEMPSHCLVHLHKNCIP 370 380 390 400 410 420 430 440 450 460 470 pF1KE4 QYTLGHWQKLESARQFLTAHRLPLTLAGASYEGVAVNDCIESGRQAAVSVLGTEPNS ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 QYTLGHWQKLESARQFLTAHRLPLTLAGASYEGVAVNDCIESGRQAAVSVLGTEPNS 430 440 450 460 470 477 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 00:57:51 2016 done: Sun Nov 6 00:57:52 2016 Total Scan time: 3.600 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]