FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3619, 194 aa 1>>>pF1KE3619 194 - 194 aa - 194 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.0336+/-0.000732; mu= 14.5219+/- 0.044 mean_var=58.4691+/-11.677, 0's: 0 Z-trim(108.4): 21 B-trim: 84 in 1/50 Lambda= 0.167730 statistics sampled from 10170 (10189) to 10170 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.716), E-opt: 0.2 (0.313), width: 16 Scan time: 1.840 The best scores are: opt bits E(32554) CCDS2763.1 NME6 gene_id:10201|Hs108|chr3 ( 194) 1315 326.0 9e-90 CCDS77734.1 NME6 gene_id:10201|Hs108|chr3 ( 186) 1265 313.9 3.8e-86 CCDS82767.1 NME6 gene_id:10201|Hs108|chr3 ( 141) 990 247.3 3.3e-66 CCDS82768.1 NME6 gene_id:10201|Hs108|chr3 ( 119) 419 109.1 1.1e-24 CCDS77733.1 NME6 gene_id:10201|Hs108|chr3 ( 163) 419 109.1 1.4e-24 CCDS4197.1 NME5 gene_id:8382|Hs108|chr5 ( 212) 353 93.2 1.2e-19 CCDS44274.1 NME7 gene_id:29922|Hs108|chr1 ( 340) 317 84.6 7.3e-17 CCDS1277.1 NME7 gene_id:29922|Hs108|chr1 ( 376) 317 84.6 7.9e-17 CCDS3099.1 NME9 gene_id:347736|Hs108|chr3 ( 263) 278 75.1 4.1e-14 CCDS5452.1 NME8 gene_id:51314|Hs108|chr7 ( 588) 274 74.3 1.6e-13 CCDS10443.1 NME3 gene_id:4832|Hs108|chr16 ( 169) 251 68.5 2.6e-12 CCDS32682.1 NME2 gene_id:654364|Hs108|chr17 ( 267) 245 67.1 1e-11 CCDS11580.1 NME2 gene_id:4831|Hs108|chr17 ( 152) 239 65.6 1.8e-11 CCDS10408.1 NME4 gene_id:4833|Hs108|chr16 ( 187) 231 63.7 8.1e-11 >>CCDS2763.1 NME6 gene_id:10201|Hs108|chr3 (194 aa) initn: 1315 init1: 1315 opt: 1315 Z-score: 1725.1 bits: 326.0 E(32554): 9e-90 Smith-Waterman score: 1315; 100.0% identity (100.0% similar) in 194 aa overlap (1-194:1-194) 10 20 30 40 50 60 pF1KE3 MTQNLGSEMASILRSPQALQLTLALIKPDAVAHPLILEAVHQQILSNKFLIVRMRELLWR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS27 MTQNLGSEMASILRSPQALQLTLALIKPDAVAHPLILEAVHQQILSNKFLIVRMRELLWR 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 KEDCQRFYREHEGRFFYQRLVEFMASGPIRAYILAHKDAIQLWRTLMGPTRVFRARHVAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS27 KEDCQRFYREHEGRFFYQRLVEFMASGPIRAYILAHKDAIQLWRTLMGPTRVFRARHVAP 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 DSIRGSFGLTDTRNTTHGSDSVVSASREIAAFFPDFSEQRWYEEEEPQLRCGPVCYSPEG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS27 DSIRGSFGLTDTRNTTHGSDSVVSASREIAAFFPDFSEQRWYEEEEPQLRCGPVCYSPEG 130 140 150 160 170 180 190 pF1KE3 GVHYVAGTGGLGPA :::::::::::::: CCDS27 GVHYVAGTGGLGPA 190 >>CCDS77734.1 NME6 gene_id:10201|Hs108|chr3 (186 aa) initn: 1265 init1: 1265 opt: 1265 Z-score: 1660.0 bits: 313.9 E(32554): 3.8e-86 Smith-Waterman score: 1265; 100.0% identity (100.0% similar) in 186 aa overlap (9-194:1-186) 10 20 30 40 50 60 pF1KE3 MTQNLGSEMASILRSPQALQLTLALIKPDAVAHPLILEAVHQQILSNKFLIVRMRELLWR :::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS77 MASILRSPQALQLTLALIKPDAVAHPLILEAVHQQILSNKFLIVRMRELLWR 10 20 30 40 50 70 80 90 100 110 120 pF1KE3 KEDCQRFYREHEGRFFYQRLVEFMASGPIRAYILAHKDAIQLWRTLMGPTRVFRARHVAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS77 KEDCQRFYREHEGRFFYQRLVEFMASGPIRAYILAHKDAIQLWRTLMGPTRVFRARHVAP 60 70 80 90 100 110 130 140 150 160 170 180 pF1KE3 DSIRGSFGLTDTRNTTHGSDSVVSASREIAAFFPDFSEQRWYEEEEPQLRCGPVCYSPEG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS77 DSIRGSFGLTDTRNTTHGSDSVVSASREIAAFFPDFSEQRWYEEEEPQLRCGPVCYSPEG 120 130 140 150 160 170 190 pF1KE3 GVHYVAGTGGLGPA :::::::::::::: CCDS77 GVHYVAGTGGLGPA 180 >>CCDS82767.1 NME6 gene_id:10201|Hs108|chr3 (141 aa) initn: 990 init1: 990 opt: 990 Z-score: 1302.2 bits: 247.3 E(32554): 3.3e-66 Smith-Waterman score: 990; 100.0% identity (100.0% similar) in 141 aa overlap (54-194:1-141) 30 40 50 60 70 80 pF1KE3 ALIKPDAVAHPLILEAVHQQILSNKFLIVRMRELLWRKEDCQRFYREHEGRFFYQRLVEF :::::::::::::::::::::::::::::: CCDS82 MRELLWRKEDCQRFYREHEGRFFYQRLVEF 10 20 30 90 100 110 120 130 140 pF1KE3 MASGPIRAYILAHKDAIQLWRTLMGPTRVFRARHVAPDSIRGSFGLTDTRNTTHGSDSVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 MASGPIRAYILAHKDAIQLWRTLMGPTRVFRARHVAPDSIRGSFGLTDTRNTTHGSDSVV 40 50 60 70 80 90 150 160 170 180 190 pF1KE3 SASREIAAFFPDFSEQRWYEEEEPQLRCGPVCYSPEGGVHYVAGTGGLGPA ::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 SASREIAAFFPDFSEQRWYEEEEPQLRCGPVCYSPEGGVHYVAGTGGLGPA 100 110 120 130 140 >>CCDS82768.1 NME6 gene_id:10201|Hs108|chr3 (119 aa) initn: 798 init1: 419 opt: 419 Z-score: 556.6 bits: 109.1 E(32554): 1.1e-24 Smith-Waterman score: 668; 64.0% identity (64.0% similar) in 186 aa overlap (9-194:1-119) 10 20 30 40 50 60 pF1KE3 MTQNLGSEMASILRSPQALQLTLALIKPDAVAHPLILEAVHQQILSNKFLIVRMRELLWR :::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 MASILRSPQALQLTLALIKPDAVAHPLILEAVHQQILSNKFLIVRMRELLWR 10 20 30 40 50 70 80 90 100 110 120 pF1KE3 KEDCQRFYREHEGRFFYQRLVEFMASGPIRAYILAHKDAIQLWRTLMGPTRVFRARHVAP :::::::::::: CCDS82 KEDCQRFYREHE------------------------------------------------ 60 130 140 150 160 170 180 pF1KE3 DSIRGSFGLTDTRNTTHGSDSVVSASREIAAFFPDFSEQRWYEEEEPQLRCGPVCYSPEG ::::::::::::::::::::::::::::::::::::::::: CCDS82 -------------------DSVVSASREIAAFFPDFSEQRWYEEEEPQLRCGPVCYSPEG 70 80 90 100 190 pF1KE3 GVHYVAGTGGLGPA :::::::::::::: CCDS82 GVHYVAGTGGLGPA 110 >>CCDS77733.1 NME6 gene_id:10201|Hs108|chr3 (163 aa) initn: 419 init1: 419 opt: 419 Z-score: 554.5 bits: 109.1 E(32554): 1.4e-24 Smith-Waterman score: 419; 100.0% identity (100.0% similar) in 64 aa overlap (9-72:1-64) 10 20 30 40 50 60 pF1KE3 MTQNLGSEMASILRSPQALQLTLALIKPDAVAHPLILEAVHQQILSNKFLIVRMRELLWR :::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS77 MASILRSPQALQLTLALIKPDAVAHPLILEAVHQQILSNKFLIVRMRELLWR 10 20 30 40 50 70 80 90 100 110 120 pF1KE3 KEDCQRFYREHEGRFFYQRLVEFMASGPIRAYILAHKDAIQLWRTLMGPTRVFRARHVAP :::::::::::: CCDS77 KEDCQRFYREHEAGQSEPTSLPTRMPSSSGGRSWDPPECSEHAMWPQILSVGVSASLTPA 60 70 80 90 100 110 >>CCDS4197.1 NME5 gene_id:8382|Hs108|chr5 (212 aa) initn: 364 init1: 311 opt: 353 Z-score: 466.5 bits: 93.2 E(32554): 1.2e-19 Smith-Waterman score: 353; 41.1% identity (69.5% similar) in 141 aa overlap (16-155:8-145) 10 20 30 40 50 pF1KE3 MTQNLGSEMASILRSPQA-LQLTLALIKPDAVAHPLILEAVHQQILSNKFLIVRMRELLW :: .. :::.:::: : . : ... :: . : ::. :.: CCDS41 MEISMPPPQIYVEKTLAIIKPDIVDKE---EEIQDIILRSGFTIVQRRKLRL 10 20 30 40 60 70 80 90 100 110 pF1KE3 RKEDCQRFYREHEGRFFYQRLVEFMASGPIRAYILAHKDAIQLWRTLMGPTRVFRARHVA :.:. :: :. :..:. :. .:.:::. :.:::.. ::. : :.::. . :... CCDS41 SPEQCSNFYVEKYGKMFFPNLTAYMSSGPLVAMILARHKAISYWLELLGPNNSLVAKETH 50 60 70 80 90 100 120 130 140 150 160 170 pF1KE3 PDSIRGSFGLTDTRNTTHGSDSVVSASREIAAFFPDFSEQRWYEEEEPQLRCGPVCYSPE :::.:. .: : ::. :::.. ..: ::: .::. CCDS41 PDSLRAIYGTDDLRNALHGSNDFAAAEREIRFMFPEVIVEPIPIGQAAKDYLNLHIMPTL 110 120 130 140 150 160 180 190 pF1KE3 GGVHYVAGTGGLGPA CCDS41 LEGLTELCKQKPADPLIWLADWLLKNNPNKPKLCHHPIVEEPY 170 180 190 200 210 >>CCDS44274.1 NME7 gene_id:29922|Hs108|chr1 (340 aa) initn: 315 init1: 253 opt: 317 Z-score: 416.3 bits: 84.6 E(32554): 7.3e-17 Smith-Waterman score: 317; 38.1% identity (68.7% similar) in 134 aa overlap (22-154:58-187) 10 20 30 40 50 pF1KE3 MTQNLGSEMASILRSPQALQLTLALIKPDAVAHP-LILEAVHQQILSNKFL :::::::::... :.: ... : CCDS44 NKVNVFSRQLVLIDYGDQYTARQLGSRKEKTLALIKPDAISKAGEIIEIINKA----GFT 30 40 50 60 70 80 60 70 80 90 100 110 pF1KE3 IVRMRELLWRKEDCQRFYREHEGRFFYQRLVEFMASGPIRAYILAHKDAIQLWRTLMGPT :.... .. ... :. .:..: :...:..:...::: :. . . ::: :. :.::. CCDS44 ITKLKMMMLSRKEALDFHVDHQSRPFFNELIQFITTGPIIAMEILRDDAICEWKRLLGPA 90 100 110 120 130 140 120 130 140 150 160 170 pF1KE3 RVFRARHVAPDSIRGSFGLTDTRNTTHGSDSVVSASREIAAFFPDFSEQRWYEEEEPQLR :: : .:::. :: ::..:: :: .::.::. ::: CCDS44 NSGVARTDASESIRALFGTDGIRNAAHGPDSFASAAREMELFFPSSGGCGPANTAKFTNC 150 160 170 180 190 200 180 190 pF1KE3 CGPVCYSPEGGVHYVAGTGGLGPA CCDS44 TCCIVKPHAVSEGLLGKILMAIRDAGFEISAMQMFNMDRVNVEEFYEVYKGVVTEYHDMV 210 220 230 240 250 260 >>CCDS1277.1 NME7 gene_id:29922|Hs108|chr1 (376 aa) initn: 298 init1: 253 opt: 317 Z-score: 415.6 bits: 84.6 E(32554): 7.9e-17 Smith-Waterman score: 317; 38.1% identity (68.7% similar) in 134 aa overlap (22-154:94-223) 10 20 30 40 50 pF1KE3 MTQNLGSEMASILRSPQALQLTLALIKPDAVAHP-LILEAVHQQILSNKFL :::::::::... :.: ... : CCDS12 NKVNVFSRQLVLIDYGDQYTARQLGSRKEKTLALIKPDAISKAGEIIEIINKA----GFT 70 80 90 100 110 60 70 80 90 100 110 pF1KE3 IVRMRELLWRKEDCQRFYREHEGRFFYQRLVEFMASGPIRAYILAHKDAIQLWRTLMGPT :.... .. ... :. .:..: :...:..:...::: :. . . ::: :. :.::. CCDS12 ITKLKMMMLSRKEALDFHVDHQSRPFFNELIQFITTGPIIAMEILRDDAICEWKRLLGPA 120 130 140 150 160 170 120 130 140 150 160 170 pF1KE3 RVFRARHVAPDSIRGSFGLTDTRNTTHGSDSVVSASREIAAFFPDFSEQRWYEEEEPQLR :: : .:::. :: ::..:: :: .::.::. ::: CCDS12 NSGVARTDASESIRALFGTDGIRNAAHGPDSFASAAREMELFFPSSGGCGPANTAKFTNC 180 190 200 210 220 230 180 190 pF1KE3 CGPVCYSPEGGVHYVAGTGGLGPA CCDS12 TCCIVKPHAVSEGLLGKILMAIRDAGFEISAMQMFNMDRVNVEEFYEVYKGVVTEYHDMV 240 250 260 270 280 290 >>CCDS3099.1 NME9 gene_id:347736|Hs108|chr3 (263 aa) initn: 256 init1: 141 opt: 278 Z-score: 366.9 bits: 75.1 E(32554): 4.1e-14 Smith-Waterman score: 278; 35.9% identity (62.7% similar) in 153 aa overlap (22-168:100-248) 10 20 30 40 50 pF1KE3 MTQNLGSEMASILRSPQALQLTLALIKPDAVAHPLILEAVHQQILSNKFLI :::.:::::::: : . ..: : : CCDS30 DEALSDEDECVSHGKNNGEDEDMVSSERTCTLAIIKPDAVAHGKTDEII-MKIQEAGFEI 70 80 90 100 110 120 60 70 80 90 100 pF1KE3 VRMRELLWRKEDCQRFYREHEGRFFYQRLVEFMASGPIRAYILAH----KDAIQLWRTLM . .: . . . ::... :. ...::. : ::: . ::.. .:.. :::.: CCDS30 LTNEERTMTEAEVRLFYQHKAGEEAFEKLVHHMCSGPSHLLILTRTEGFEDVVTTWRTVM 130 140 150 160 170 180 110 120 130 140 150 160 pF1KE3 GPTRVFRARHVAPDSIRGSFGLTDTRNTTHGSDSVVSASREIAAFFPD--FSEQRWYEEE :: ::. :.:.:...: :..::: . .:.::.: .::. ::.. . : CCDS30 GPRDPNVARREQPESLRAQYGTEMPFNAVHGSRDREDADRELALLFPSLKFSDK---DTE 190 200 210 220 230 240 170 180 190 pF1KE3 EPQLRCGPVCYSPEGGVHYVAGTGGLGPA :: CCDS30 APQGESSTQPRLKITDLD 250 260 >>CCDS5452.1 NME8 gene_id:51314|Hs108|chr7 (588 aa) initn: 419 init1: 211 opt: 274 Z-score: 356.4 bits: 74.3 E(32554): 1.6e-13 Smith-Waterman score: 274; 32.1% identity (67.9% similar) in 140 aa overlap (19-158:450-587) 10 20 30 40 pF1KE3 MTQNLGSEMASILRSPQALQLTLALIKPDAVAHPLILEAVHQQILSNK :: ::.:::: :... : . . . CCDS54 QFAMDSLPVNQLYGSDSLETAEREIQHFFPLQSTLGLIKPHATSEQR--EQILKIVKEAG 420 430 440 450 460 470 50 60 70 80 90 100 pF1KE3 FLIVRMRELLWRKEDCQRFYREHEGRFFYQRLVEFMASGPIRAYILAHKDAIQLWRTLMG : ........ :. ...: . :. ::. :.:... :: ..::.. .:. :: ::: CCDS54 FDLTQVKKMFLTPEQIEKIYPKVTGKDFYKDLLEMLSVGPSMVMILTKWNAVAEWRRLMG 480 490 500 510 520 530 110 120 130 140 150 160 pF1KE3 PTRVFRARHVAPDSIRGSFGLTDTRNTTHGSDSVVSASREIAAFFPDFSEQRWYEEEEPQ :: .:. ..:::::..::.. .: .::.... :.. . .: : : CCDS54 PTDPEEAKLLSPDSIRAQFGISKLKNIVHGASNAYEAKEVVNRLFEDPEEN 540 550 560 570 580 170 180 190 pF1KE3 LRCGPVCYSPEGGVHYVAGTGGLGPA 194 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 23:27:53 2016 done: Sun Nov 6 23:27:53 2016 Total Scan time: 1.840 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]