Result of FASTA (ccds) for
pFN21AE4522
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE4522, 562 aa
1>>>pF1KE4522 562 - 562 aa - 562 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.7067+/-0.00109; mu= 15.7435+/- 0.066
mean_var=61.7066+/-11.943, 0's: 0 Z-trim(102.2): 21 B-trim: 0 in 0/47
Lambda= 0.163271
statistics sampled from 6854 (6866) to 6854 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.573), E-opt: 0.2 (0.211), width: 16
Scan time: 3.130
The best scores are: opt bits E(32554)
CCDS625.1 PGM1 gene_id:5236|Hs108|chr1 ( 562) 3653 869.6 0
CCDS53323.1 PGM1 gene_id:5236|Hs108|chr1 ( 580) 3421 814.9 0
CCDS6622.2 PGM5 gene_id:5239|Hs108|chr9 ( 567) 2634 629.6 3.1e-180
CCDS53324.1 PGM1 gene_id:5236|Hs108|chr1 ( 365) 2394 573.0 2.2e-163
>>CCDS625.1 PGM1 gene_id:5236|Hs108|chr1 (562 aa)
initn: 3653 init1: 3653 opt: 3653 Z-score: 4646.4 bits: 869.6 E(32554): 0
Smith-Waterman score: 3653; 99.6% identity (99.8% similar) in 562 aa overlap (1-562:1-562)
10 20 30 40 50 60
pF1KE4 MVKIVTVKTQAYQDQKPGTSGLRKRVKVFQSSANYAENFIQSIISTVEPAQRQEATLVVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 MVKIVTVKTQAYQDQKPGTSGLRKRVKVFQSSANYAENFIQSIISTVEPAQRQEATLVVG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 GDGRFYMKEAIQLIARIAAANGIGRLVIGQNGILSTPAVSCIIRKIKAIGGIILTASHNP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 GDGRFYMKEAIQLIARIAAANGIGRLVIGQNGILSTPAVSCIIRKIKAIGGIILTASHNP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 GGPNGDFGIKFNISNGGPAPEAITDKIFQISKTIEEYAVCPDLKVDLGVLGKQQFDLENK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 GGPNGDFGIKFNISNGGPAPEAITDKIFQISKTIEEYAVCPDLKVDLGVLGKQQFDLENK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE4 FKPFTVEIVDSVEAYATMLRSIFDFSALKELLSGPNRLKICIDAMHGVVGPYVKKILCEE
:::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::
CCDS62 FKPFTVEIVDSVEAYATMLRSIFDFSALKELLSGPNRLKIRIDAMHGVVGPYVKKILCEE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE4 LGAPANSAVNCVPLEDFGGHHPDPNLTYAADLVETMKSGEHDFGAAFDGDGDRNMILGKH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 LGAPANSAVNCVPLEDFGGHHPDPNLTYAADLVETMKSGEHDFGAAFDGDGDRNMILGKH
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE4 GFFVNPSDSVAVIAANIFSIPYFQQTGVRGFARSMPTSGALDRVASATKIALYETPTGWK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 GFFVNPSDSVAVIAANIFSIPYFQQTGVRGFARSMPTSGALDRVASATKIALYETPTGWK
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE4 FFGNLMDASKLSLCGEESFGTGSDHIREKDGLWAVLAWLSILATRKQSVEDILKDHWQKH
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.
CCDS62 FFGNLMDASKLSLCGEESFGTGSDHIREKDGLWAVLAWLSILATRKQSVEDILKDHWQKY
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE4 GRNFFTRYDYEEVEAEGANKMMKDLEALMFDRSFVGKQFSANDKVYTVEKADNFEYSDPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 GRNFFTRYDYEEVEAEGANKMMKDLEALMFDRSFVGKQFSANDKVYTVEKADNFEYSDPV
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE4 DGSISRNQGLRLIFTDGSRIVFRLSGTGSAGATIRLYIDSYEKDVAKINQDPQVMLAPLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 DGSISRNQGLRLIFTDGSRIVFRLSGTGSAGATIRLYIDSYEKDVAKINQDPQVMLAPLI
490 500 510 520 530 540
550 560
pF1KE4 SIALKVSQLQERTGRTAPTVIT
::::::::::::::::::::::
CCDS62 SIALKVSQLQERTGRTAPTVIT
550 560
>>CCDS53323.1 PGM1 gene_id:5236|Hs108|chr1 (580 aa)
initn: 3421 init1: 3421 opt: 3421 Z-score: 4350.9 bits: 814.9 E(32554): 0
Smith-Waterman score: 3421; 93.0% identity (96.8% similar) in 559 aa overlap (4-562:22-580)
10 20 30 40
pF1KE4 MVKIVTVKTQAYQDQKPGTSGLRKRVKVFQSSANYAENFIQS
..: : :.:::::::::::.. :. . : ::::::
CCDS53 MSDFEEWISGTYRKMEEGPLPLLTFATAPYHDQKPGTSGLRKKTYYFEEKPCYLENFIQS
10 20 30 40 50 60
50 60 70 80 90 100
pF1KE4 IISTVEPAQRQEATLVVGGDGRFYMKEAIQLIARIAAANGIGRLVIGQNGILSTPAVSCI
:. ... .:: ..::::::::.. : ::. :...:::::::::::::::::::::::::
CCDS53 IFFSIDLKDRQGSSLVVGGDGRYFNKSAIETIVQMAAANGIGRLVIGQNGILSTPAVSCI
70 80 90 100 110 120
110 120 130 140 150 160
pF1KE4 IRKIKAIGGIILTASHNPGGPNGDFGIKFNISNGGPAPEAITDKIFQISKTIEEYAVCPD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 IRKIKAIGGIILTASHNPGGPNGDFGIKFNISNGGPAPEAITDKIFQISKTIEEYAVCPD
130 140 150 160 170 180
170 180 190 200 210 220
pF1KE4 LKVDLGVLGKQQFDLENKFKPFTVEIVDSVEAYATMLRSIFDFSALKELLSGPNRLKICI
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :
CCDS53 LKVDLGVLGKQQFDLENKFKPFTVEIVDSVEAYATMLRSIFDFSALKELLSGPNRLKIRI
190 200 210 220 230 240
230 240 250 260 270 280
pF1KE4 DAMHGVVGPYVKKILCEELGAPANSAVNCVPLEDFGGHHPDPNLTYAADLVETMKSGEHD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 DAMHGVVGPYVKKILCEELGAPANSAVNCVPLEDFGGHHPDPNLTYAADLVETMKSGEHD
250 260 270 280 290 300
290 300 310 320 330 340
pF1KE4 FGAAFDGDGDRNMILGKHGFFVNPSDSVAVIAANIFSIPYFQQTGVRGFARSMPTSGALD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 FGAAFDGDGDRNMILGKHGFFVNPSDSVAVIAANIFSIPYFQQTGVRGFARSMPTSGALD
310 320 330 340 350 360
350 360 370 380 390 400
pF1KE4 RVASATKIALYETPTGWKFFGNLMDASKLSLCGEESFGTGSDHIREKDGLWAVLAWLSIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 RVASATKIALYETPTGWKFFGNLMDASKLSLCGEESFGTGSDHIREKDGLWAVLAWLSIL
370 380 390 400 410 420
410 420 430 440 450 460
pF1KE4 ATRKQSVEDILKDHWQKHGRNFFTRYDYEEVEAEGANKMMKDLEALMFDRSFVGKQFSAN
:::::::::::::::::.::::::::::::::::::::::::::::::::::::::::::
CCDS53 ATRKQSVEDILKDHWQKYGRNFFTRYDYEEVEAEGANKMMKDLEALMFDRSFVGKQFSAN
430 440 450 460 470 480
470 480 490 500 510 520
pF1KE4 DKVYTVEKADNFEYSDPVDGSISRNQGLRLIFTDGSRIVFRLSGTGSAGATIRLYIDSYE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 DKVYTVEKADNFEYSDPVDGSISRNQGLRLIFTDGSRIVFRLSGTGSAGATIRLYIDSYE
490 500 510 520 530 540
530 540 550 560
pF1KE4 KDVAKINQDPQVMLAPLISIALKVSQLQERTGRTAPTVIT
::::::::::::::::::::::::::::::::::::::::
CCDS53 KDVAKINQDPQVMLAPLISIALKVSQLQERTGRTAPTVIT
550 560 570 580
>>CCDS6622.2 PGM5 gene_id:5239|Hs108|chr9 (567 aa)
initn: 2588 init1: 2588 opt: 2634 Z-score: 3349.2 bits: 629.6 E(32554): 3.1e-180
Smith-Waterman score: 2634; 64.9% identity (90.4% similar) in 562 aa overlap (2-562:6-567)
10 20 30 40 50
pF1KE4 MVKIVTVKTQAYQDQKP-GTSGLRKRVKVFQSSANYAENFIQSIISTVEPAQRQEA
. ..:: : :.::.: : .:::. . .:... :: :::::..:... .::
CCDS66 MEGSPIPVLTVPTAPYEDQRPAGGGGLRRPTGLFEGQRNYLPNFIQSVLSSIDLRDRQGC
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE4 TLVVGGDGRFYMKEAIQLIARIAAANGIGRLVIGQNGILSTPAVSCIIRKIKAIGGIILT
:.:::.:::.. . ::......:::::::::.::::::::::::::::::::: ::::::
CCDS66 TMVVGSDGRYFSRTAIEIVVQMAAANGIGRLIIGQNGILSTPAVSCIIRKIKAAGGIILT
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE4 ASHNPGGPNGDFGIKFNISNGGPAPEAITDKIFQISKTIEEYAVCPDLKVDLGVLGKQQF
::: ::::.:.::.:::..::::::....:::.::::::::::.::::..::. ::.:.:
CCDS66 ASHCPGGPGGEFGVKFNVANGGPAPDVVSDKIYQISKTIEEYAICPDLRIDLSRLGRQEF
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE4 DLENKFKPFTVEIVDSVEAYATMLRSIFDFSALKELLSGPNRLKICIDAMHGVVGPYVKK
::::::::: ::::: :. : ..::.:::: :.: ::.::..::: :::::::.::::.:
CCDS66 DLENKFKPFRVEIVDPVDIYLNLLRTIFDFHAIKGLLTGPSQLKIRIDAMHGVMGPYVRK
190 200 210 220 230 240
240 250 260 270 280 290
pF1KE4 ILCEELGAPANSAVNCVPLEDFGGHHPDPNLTYAADLVETMKSGEHDFGAAFDGDGDRNM
.::.:::::::::.::::::::::.:::::::::. :.:.::.::. ::::::.:::: :
CCDS66 VLCDELGAPANSAINCVPLEDFGGQHPDPNLTYATTLLEAMKGGEYGFGAAFDADGDRYM
250 260 270 280 290 300
300 310 320 330 340 350
pF1KE4 ILGKHGFFVNPSDSVAVIAANIFSIPYFQQTGVRGFARSMPTSGALDRVASATKIALYET
:::..::::.::::.:.::::. ::::.: :::::.:::::: ::::::.. :. .:::
CCDS66 ILGQNGFFVSPSDSLAIIAANLSCIPYFRQMGVRGFGRSMPTSMALDRVAKSMKVPVYET
310 320 330 340 350 360
360 370 380 390 400 410
pF1KE4 PTGWKFFGNLMDASKLSLCGEESFGTGSDHIREKDGLWAVLAWLSILATRKQSVEDILKD
:.::.::.::::... .:::::::::::::.::::::::::.::::.:.::::::.:..:
CCDS66 PAGWRFFSNLMDSGRCNLCGEESFGTGSDHLREKDGLWAVLVWLSIIAARKQSVEEIVRD
370 380 390 400 410 420
420 430 440 450 460 470
pF1KE4 HWQKHGRNFFTRYDYEEVEAEGANKMMKDLEALMFDRSFVGKQFSANDKVYTVEKADNFE
:: : ::... :.::: .. . . .:.:::::. :.::.:.::.....::.: :.:.::
CCDS66 HWAKFGRHYYCRFDYEGLDPKTTYYIMRDLEALVTDKSFIGQQFAVGSHVYSVAKTDSFE
430 440 450 460 470 480
480 490 500 510 520 530
pF1KE4 YSDPVDGSISRNQGLRLIFTDGSRIVFRLSGTGSAGATIRLYIDSYEKDVAKINQDPQVM
: :::::.....::::.::.:.::..::::..... ::.::: .:::.: . .:.::..
CCDS66 YVDPVDGTVTKKQGLRIIFSDASRLIFRLSSSSGVRATLRLYAESYERDPSGHDQEPQAV
490 500 510 520 530 540
540 550 560
pF1KE4 LAPLISIALKVSQLQERTGRTAPTVIT
:.:::.::::.::..::::: .:::::
CCDS66 LSPLIAIALKISQIHERTGRRGPTVIT
550 560
>>CCDS53324.1 PGM1 gene_id:5236|Hs108|chr1 (365 aa)
initn: 2394 init1: 2394 opt: 2394 Z-score: 3046.8 bits: 573.0 E(32554): 2.2e-163
Smith-Waterman score: 2394; 99.5% identity (99.7% similar) in 365 aa overlap (198-562:1-365)
170 180 190 200 210 220
pF1KE4 GVLGKQQFDLENKFKPFTVEIVDSVEAYATMLRSIFDFSALKELLSGPNRLKICIDAMHG
::::::::::::::::::::::: ::::::
CCDS53 MLRSIFDFSALKELLSGPNRLKIRIDAMHG
10 20 30
230 240 250 260 270 280
pF1KE4 VVGPYVKKILCEELGAPANSAVNCVPLEDFGGHHPDPNLTYAADLVETMKSGEHDFGAAF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 VVGPYVKKILCEELGAPANSAVNCVPLEDFGGHHPDPNLTYAADLVETMKSGEHDFGAAF
40 50 60 70 80 90
290 300 310 320 330 340
pF1KE4 DGDGDRNMILGKHGFFVNPSDSVAVIAANIFSIPYFQQTGVRGFARSMPTSGALDRVASA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 DGDGDRNMILGKHGFFVNPSDSVAVIAANIFSIPYFQQTGVRGFARSMPTSGALDRVASA
100 110 120 130 140 150
350 360 370 380 390 400
pF1KE4 TKIALYETPTGWKFFGNLMDASKLSLCGEESFGTGSDHIREKDGLWAVLAWLSILATRKQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 TKIALYETPTGWKFFGNLMDASKLSLCGEESFGTGSDHIREKDGLWAVLAWLSILATRKQ
160 170 180 190 200 210
410 420 430 440 450 460
pF1KE4 SVEDILKDHWQKHGRNFFTRYDYEEVEAEGANKMMKDLEALMFDRSFVGKQFSANDKVYT
::::::::::::.:::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 SVEDILKDHWQKYGRNFFTRYDYEEVEAEGANKMMKDLEALMFDRSFVGKQFSANDKVYT
220 230 240 250 260 270
470 480 490 500 510 520
pF1KE4 VEKADNFEYSDPVDGSISRNQGLRLIFTDGSRIVFRLSGTGSAGATIRLYIDSYEKDVAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 VEKADNFEYSDPVDGSISRNQGLRLIFTDGSRIVFRLSGTGSAGATIRLYIDSYEKDVAK
280 290 300 310 320 330
530 540 550 560
pF1KE4 INQDPQVMLAPLISIALKVSQLQERTGRTAPTVIT
:::::::::::::::::::::::::::::::::::
CCDS53 INQDPQVMLAPLISIALKVSQLQERTGRTAPTVIT
340 350 360
562 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 00:16:10 2016 done: Sun Nov 6 00:16:11 2016
Total Scan time: 3.130 Total Display time: 0.050
Function used was FASTA [36.3.4 Apr, 2011]