FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6127, 138 aa 1>>>pF1KE6127 138 - 138 aa - 138 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.4121+/-0.0008; mu= 9.9262+/- 0.048 mean_var=56.5933+/-11.187, 0's: 0 Z-trim(105.9): 23 B-trim: 0 in 0/50 Lambda= 0.170487 statistics sampled from 8636 (8656) to 8636 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.657), E-opt: 0.2 (0.266), width: 16 Scan time: 1.130 The best scores are: opt bits E(32554) CCDS1152.1 CRABP2 gene_id:1382|Hs108|chr1 ( 138) 896 228.3 1.1e-60 CCDS10301.1 CRABP1 gene_id:1381|Hs108|chr15 ( 137) 702 180.6 2.6e-46 CCDS3110.2 RBP1 gene_id:5947|Hs108|chr3 ( 197) 338 91.1 3.3e-19 CCDS5127.1 FABP7 gene_id:2173|Hs108|chr6 ( 132) 335 90.4 3.8e-19 CCDS342.1 FABP3 gene_id:2170|Hs108|chr1 ( 133) 335 90.4 3.8e-19 CCDS8574.1 RBP5 gene_id:83758|Hs108|chr12 ( 135) 320 86.7 4.9e-18 CCDS109.1 RBP7 gene_id:116362|Hs108|chr1 ( 134) 314 85.2 1.4e-17 CCDS6229.1 PMP2 gene_id:5375|Hs108|chr8 ( 132) 309 84.0 3.2e-17 CCDS83121.1 FABP7 gene_id:2173|Hs108|chr6 ( 166) 299 81.5 2.1e-16 CCDS3109.1 RBP2 gene_id:5948|Hs108|chr3 ( 134) 286 78.3 1.6e-15 CCDS47882.1 FABP12 gene_id:646486|Hs108|chr8 ( 140) 283 77.6 2.8e-15 CCDS6228.1 FABP5 gene_id:2171|Hs108|chr8 ( 135) 280 76.8 4.5e-15 CCDS6230.1 FABP4 gene_id:2167|Hs108|chr8 ( 132) 260 71.9 1.3e-13 CCDS46925.1 RBP1 gene_id:5947|Hs108|chr3 ( 153) 244 68.0 2.4e-12 CCDS46926.1 RBP1 gene_id:5947|Hs108|chr3 ( 157) 243 67.7 2.9e-12 CCDS3712.1 FABP2 gene_id:2169|Hs108|chr4 ( 132) 232 65.0 1.6e-11 >>CCDS1152.1 CRABP2 gene_id:1382|Hs108|chr1 (138 aa) initn: 896 init1: 896 opt: 896 Z-score: 1202.7 bits: 228.3 E(32554): 1.1e-60 Smith-Waterman score: 896; 100.0% identity (100.0% similar) in 138 aa overlap (1-138:1-138) 10 20 30 40 50 60 pF1KE6 MPNFSGNWKIIRSENFEELLKVLGVNVMLRKIAVAAASKPAVEIKQEGDTFYIKTSTTVR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 MPNFSGNWKIIRSENFEELLKVLGVNVMLRKIAVAAASKPAVEIKQEGDTFYIKTSTTVR 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 TTEINFKVGEEFEEQTVDGRPCKSLVKWESENKMVCEQKLLKGEGPKTSWTRELTNDGEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 TTEINFKVGEEFEEQTVDGRPCKSLVKWESENKMVCEQKLLKGEGPKTSWTRELTNDGEL 70 80 90 100 110 120 130 pF1KE6 ILTMTADDVVCTRVYVRE :::::::::::::::::: CCDS11 ILTMTADDVVCTRVYVRE 130 >>CCDS10301.1 CRABP1 gene_id:1381|Hs108|chr15 (137 aa) initn: 604 init1: 604 opt: 702 Z-score: 944.9 bits: 180.6 E(32554): 2.6e-46 Smith-Waterman score: 702; 76.8% identity (90.6% similar) in 138 aa overlap (1-138:1-137) 10 20 30 40 50 60 pF1KE6 MPNFSGNWKIIRSENFEELLKVLGVNVMLRKIAVAAASKPAVEIKQEGDTFYIKTSTTVR ::::.:.::. ::::.::::.::::.::::.:::::::: :::.:.:: :::::::::: CCDS10 MPNFAGTWKMRSSENFDELLKALGVNAMLRKVAVAAASKPHVEIRQDGDQFYIKTSTTVR 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 TTEINFKVGEEFEEQTVDGRPCKSLVKWESENKMVCEQKLLKGEGPKTSWTRELTNDGEL :::::::::: :::.::::: :.::. ::.:::. : : ::.:.:::: :::::.:: :: CCDS10 TTEINFKVGEGFEEETVDGRKCRSLATWENENKIHCTQTLLEGDGPKTYWTRELAND-EL 70 80 90 100 110 130 pF1KE6 ILTMTADDVVCTRVYVRE :::. ::::::::.:::: CCDS10 ILTFGADDVVCTRIYVRE 120 130 >>CCDS3110.2 RBP1 gene_id:5947|Hs108|chr3 (197 aa) initn: 290 init1: 129 opt: 338 Z-score: 458.4 bits: 91.1 E(32554): 3.3e-19 Smith-Waterman score: 338; 44.2% identity (67.4% similar) in 138 aa overlap (1-135:63-193) 10 20 pF1KE6 MP-NFSGNWKIIRSENFEELLKVLGVNVML :: .:.: ::.. .::::: :..: ::: : CCDS31 HHPRSTGSRCPGSLQPSRPLVANWLQSLPEMPVDFTGYWKMLVNENFEEYLRALDVNVAL 40 50 60 70 80 90 30 40 50 60 70 80 pF1KE6 RKIAVAAASKPAVEIKQEGDTFYIKTSTTVRTTEINFKVGEEFEEQT--VDGRPCKSLVK :::: :: :: :.:: . :.: .: :. ..:.::.::::. .: : : . :. CCDS31 RKIA--NLLKPDKEIVQDGDHMIIRTLSTFRNYIMDFQVGKEFEEDLTGIDDRKCMTTVS 100 110 120 130 140 150 90 100 110 120 130 pF1KE6 WESENKMVCEQKLLKGEGPKTSWTRELTNDGELILTMTADDVVCTRVYVRE :... :. : : ::: .::. . .: :: : : .. ::: .:. CCDS31 WDGD-KLQCVQ---KGEKEGRGWTQWIEGD-ELHLEMRVEGVVCKQVFKKVQ 160 170 180 190 >>CCDS5127.1 FABP7 gene_id:2173|Hs108|chr6 (132 aa) initn: 318 init1: 179 opt: 335 Z-score: 457.3 bits: 90.4 E(32554): 3.8e-19 Smith-Waterman score: 335; 43.2% identity (75.0% similar) in 132 aa overlap (4-135:5-129) 10 20 30 40 50 pF1KE6 MPNFSGNWKIIRSENFEELLKVLGVNVMLRKIAVAAASKPAVEIKQEGDTFYIKTSTTV : ..::. :.::.: .:.:::. :. :. ..::.: :.:::: :.: .: CCDS51 MVEAFCATWKLTNSQNFDEYMKALGVGFATRQ--VGNVTKPTVIISQEGDKVVIRTLSTF 10 20 30 40 50 60 70 80 90 100 110 pF1KE6 RTTEINFKVGEEFEEQTVDGRPCKSLVKWESENKMVCEQKLLKGEGPKTSWTRELTNDGE ..:::.:..::::.: :.: : :::.:. ... :.: :: .: .:...::. .::. CCDS51 KNTEISFQLGEEFDETTADDRNCKSVVSLDGD-KLVHIQKW---DGKETNFVREI-KDGK 60 70 80 90 100 110 120 130 pF1KE6 LILTMTADDVVCTRVYVRE ...:.: ::: .: : CCDS51 MVMTLTFGDVVAVRHYEKA 120 130 >>CCDS342.1 FABP3 gene_id:2170|Hs108|chr1 (133 aa) initn: 325 init1: 160 opt: 335 Z-score: 457.3 bits: 90.4 E(32554): 3.8e-19 Smith-Waterman score: 335; 43.7% identity (73.3% similar) in 135 aa overlap (4-138:5-132) 10 20 30 40 50 pF1KE6 MPNFSGNWKIIRSENFEELLKVLGVNVMLRKIAVAAASKPAVEIKQEGDTFYIKTSTTV : :.::.. :.::.. .: :::. :. ::. .::.. :...:: . .:: .: CCDS34 MVDAFLGTWKLVDSKNFDDYMKSLGVGFATRQ--VASMTKPTTIIEKNGDILTLKTHSTF 10 20 30 40 50 60 70 80 90 100 110 pF1KE6 RTTEINFKVGEEFEEQTVDGRPCKSLVKWESENKMVCEQKLLKGEGPKTSWTRELTNDGE ..:::.::.: ::.: :.: : ::.: .. .:.: .: : .: .:. .::: ::. CCDS34 KNTEISFKLGVEFDETTADDRKVKSIVTLDG-GKLV---HLQKWDGQETTLVRELI-DGK 60 70 80 90 100 110 120 130 pF1KE6 LILTMTADDVVCTRVYVRE ::::.: .::::.: .: CCDS34 LILTLTHGTAVCTRTYEKEA 120 130 >>CCDS8574.1 RBP5 gene_id:83758|Hs108|chr12 (135 aa) initn: 306 init1: 165 opt: 320 Z-score: 437.2 bits: 86.7 E(32554): 4.9e-18 Smith-Waterman score: 320; 38.7% identity (72.3% similar) in 137 aa overlap (2-135:3-131) 10 20 30 40 50 pF1KE6 MPNFSGNWKIIRSENFEELLKVLGVNVMLRKIAVAAASKPAVEIKQEGDTFYIKTSTTV ::..: .... ..:.:. :..:.... .::::. :: ::...:. . ..: .: CCDS85 MPPNLTGYYRFVSQKNMEDYLQALNISLAVRKIALLL--KPDKEIEHQGNHMTVRTLSTF 10 20 30 40 50 60 70 80 90 100 110 pF1KE6 RTTEINFKVGEEFEE--QTVDGRPCKSLVKWESENKMVCEQKLLKGEGPKTSWTRELTND :. ..: :: :::: ..:::: :...: :: :. .:: : ::: :. .: . : . CCDS85 RNYTVQFDVGVEFEEDLRSVDGRKCQTIVTWEEEH-LVCVQ---KGEVPNRGWRHWL--E 60 70 80 90 100 110 120 130 pF1KE6 GELI-LTMTADDVVCTRVYVRE ::.. : .:: :.:: .:. CCDS85 GEMLYLELTARDAVCEQVFRKVR 120 130 >>CCDS109.1 RBP7 gene_id:116362|Hs108|chr1 (134 aa) initn: 296 init1: 147 opt: 314 Z-score: 429.3 bits: 85.2 E(32554): 1.4e-17 Smith-Waterman score: 314; 39.3% identity (69.3% similar) in 140 aa overlap (1-137:1-133) 10 20 30 40 50 pF1KE6 MP-NFSGNWKIIRSENFEELLKVLGVNVMLRKIAVAAASKPAVEIKQEGDTFYIKTSTTV :: ..::.: .. :.::: . .::.. ::: : :: :.:.::.: :.:.... CCDS10 MPADLSGTWTLLSSDNFEGYMLALGIDFATRKI--AKLLKPQKVIEQNGDSFTIHTNSSL 10 20 30 40 50 60 70 80 90 100 110 pF1KE6 RTTEINFKVGEEFEEQT--VDGRPCKSLVKWESENKMVCEQKLLKGEGPKTSWTRELTND :. ..:::::::.:.. .:.: ::::: :... ...: :: :: . .::. . .: CCDS10 RNYFVKFKVGEEFDEDNRGLDNRKCKSLVIWDND-RLTCIQK---GEKKNRGWTHWIEGD 60 70 80 90 100 110 120 130 pF1KE6 GELILTMTADDVVCTRVYVRE .: : : . :: ... : CCDS10 -KLHLEMFCEGQVCKQTFQRA 120 130 >>CCDS6229.1 PMP2 gene_id:5375|Hs108|chr8 (132 aa) initn: 292 init1: 162 opt: 309 Z-score: 422.8 bits: 84.0 E(32554): 3.2e-17 Smith-Waterman score: 309; 39.7% identity (69.9% similar) in 136 aa overlap (1-135:1-129) 10 20 30 40 50 pF1KE6 MPN-FSGNWKIIRSENFEELLKVLGVNVMLRKIAVAAASKPAVEIKQEGDTFYIKTSTTV : : : :.::.. ::::.. .:.:::.. ::.. : ::.: :...:: . :.: .: CCDS62 MSNKFLGTWKLVSSENFDDYMKALGVGLATRKLGNLA--KPTVIISKKGDIITIRTESTF 10 20 30 40 50 60 70 80 90 100 110 pF1KE6 RTTEINFKVGEEFEEQTVDGRPCKSLVKWESENKMVCEQKLLKGEGPKTSWTRELTNDGE ..:::.::.:.:::: :.:.: ::.: . . ... . .: .:. :.:.: :. CCDS62 KNTEISFKLGQEFEETTADNRKTKSIVTLQRGS----LNQVQRWDGKETTIKRKLVN-GK 60 70 80 90 100 110 120 130 pF1KE6 LILTMTADDVVCTRVYVRE .. :::::.: CCDS62 MVAECKMKGVVCTRIYEKV 120 130 >>CCDS83121.1 FABP7 gene_id:2173|Hs108|chr6 (166 aa) initn: 268 init1: 179 opt: 299 Z-score: 407.8 bits: 81.5 E(32554): 2.1e-16 Smith-Waterman score: 299; 41.6% identity (75.2% similar) in 125 aa overlap (4-128:5-120) 10 20 30 40 50 pF1KE6 MPNFSGNWKIIRSENFEELLKVLGVNVMLRKIAVAAASKPAVEIKQEGDTFYIKTSTTV : ..::. :.::.: .:.:::. :. :. ..::.: :.:::: :.: .: CCDS83 MVEAFCATWKLTNSQNFDEYMKALGVGFATRQ--VGNVTKPTVIISQEGDKVVIRTLSTF 10 20 30 40 50 60 70 80 90 100 110 pF1KE6 RTTEINFKVGEEFEEQTVDGRPCKSLVKWESENKMVCEQKLLKGEGPKTSWTRELTNDGE ..:::.:..::::.: :.: : :::.:. ... :.: :: .: .:...::. .::. CCDS83 KNTEISFQLGEEFDETTADDRNCKSVVSLDGD-KLVHIQKW---DGKETNFVREI-KDGK 60 70 80 90 100 110 120 130 pF1KE6 LILTMTADDVVCTRVYVRE .. :...: CCDS83 MV--MVSNDNSPFFLVFFSSPHTSHLLPSSSLLLPFFLLPSFFNNTSLARFFNYM 120 130 140 150 160 >>CCDS3109.1 RBP2 gene_id:5948|Hs108|chr3 (134 aa) initn: 198 init1: 97 opt: 286 Z-score: 392.1 bits: 78.3 E(32554): 1.6e-15 Smith-Waterman score: 286; 36.8% identity (66.2% similar) in 136 aa overlap (5-138:6-134) 10 20 30 40 50 pF1KE6 MPNFSGNWKIIRSENFEELLKVLGVNVMLRKIAVAAASKPAVEIKQEGDTFYIKTSTTV .:.:.. .:::: .:.: .. ::::: .. ... :.::.: ::..: CCDS31 MTRDQNGTWEMESNENFEGYMKALDIDFATRKIAVRLTQTKVID--QDGDNFKTKTTSTF 10 20 30 40 50 60 70 80 90 100 110 pF1KE6 RTTEINFKVGEEFEEQT--VDGRPCKSLVKWESENKMVCEQKLLKGEGPKTSWTRELTND :. ...: :: ::.: : .:.: :.:: ::.. .:: :: :: . .: . . .: CCDS31 RNYDVDFTVGVEFDEYTKSLDNRHVKALVTWEGDV-LVCVQK---GEKENRGWKQWIEGD 60 70 80 90 100 110 120 130 pF1KE6 GELILTMTADDVVCTRVYVRE .: : .: : :: .:. .. CCDS31 -KLYLELTCGDQVCRQVFKKK 120 130 138 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 09:41:08 2016 done: Tue Nov 8 09:41:09 2016 Total Scan time: 1.130 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]