FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1424, 556 aa 1>>>pF1KE1424 556 - 556 aa - 556 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.3722+/-0.000561; mu= 17.9923+/- 0.035 mean_var=70.4658+/-14.266, 0's: 0 Z-trim(105.3): 36 B-trim: 0 in 0/51 Lambda= 0.152787 statistics sampled from 13458 (13491) to 13458 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.497), E-opt: 0.2 (0.158), width: 16 Scan time: 9.480 The best scores are: opt bits E(85289) NP_110379 (OMIM: 186980) T-complex protein 1 subun ( 556) 3500 781.8 0 NP_001008897 (OMIM: 186980) T-complex protein 1 su ( 401) 2534 568.8 1.2e-161 NP_006420 (OMIM: 605140) T-complex protein 1 subun ( 543) 903 209.3 2.5e-53 NP_006421 (OMIM: 605142) T-complex protein 1 subun ( 539) 874 202.9 2.1e-51 NP_005989 (OMIM: 600114) T-complex protein 1 subun ( 545) 848 197.2 1.1e-49 NP_001293082 (OMIM: 256840,610150) T-complex prote ( 520) 844 196.3 2e-49 NP_036205 (OMIM: 256840,610150) T-complex protein ( 541) 842 195.9 2.8e-49 NP_001159757 (OMIM: 605140) T-complex protein 1 su ( 499) 838 195.0 4.8e-49 XP_011530781 (OMIM: 605140) PREDICTED: T-complex p ( 499) 838 195.0 4.8e-49 XP_011530780 (OMIM: 605140) PREDICTED: T-complex p ( 499) 838 195.0 4.8e-49 NP_001293085 (OMIM: 256840,610150) T-complex prote ( 503) 833 193.9 1e-48 NP_001753 (OMIM: 104613) T-complex protein 1 subun ( 531) 755 176.7 1.6e-43 NP_006575 (OMIM: 610730) T-complex protein 1 subun ( 530) 742 173.8 1.2e-42 NP_001243650 (OMIM: 605142) T-complex protein 1 su ( 509) 707 166.1 2.4e-40 XP_016879512 (OMIM: 610730) PREDICTED: T-complex p ( 464) 691 162.5 2.6e-39 NP_001008800 (OMIM: 600114) T-complex protein 1 su ( 507) 683 160.8 9.4e-39 NP_001159756 (OMIM: 605140) T-complex protein 1 su ( 456) 675 159.0 2.9e-38 NP_006422 (OMIM: 605139) T-complex protein 1 subun ( 535) 653 154.2 9.6e-37 NP_001293084 (OMIM: 256840,610150) T-complex prote ( 448) 598 142.0 3.7e-33 NP_001293083 (OMIM: 256840,610150) T-complex prote ( 486) 598 142.1 4e-33 NP_001009186 (OMIM: 104613) T-complex protein 1 su ( 486) 578 137.7 8.4e-32 NP_001009570 (OMIM: 605140) T-complex protein 1 su ( 339) 572 136.2 1.6e-31 NP_001180459 (OMIM: 610730) T-complex protein 1 su ( 485) 573 136.5 1.8e-31 NP_001185771 (OMIM: 605139) T-complex protein 1 su ( 488) 564 134.6 7.2e-31 XP_011522505 (OMIM: 610730) PREDICTED: T-complex p ( 388) 519 124.6 5.8e-28 XP_016879513 (OMIM: 610730) PREDICTED: T-complex p ( 351) 395 97.2 9e-20 NP_001180458 (OMIM: 610730) T-complex protein 1 su ( 493) 386 95.3 4.7e-19 NP_955472 (OMIM: 118190,605280,612233) 60 kDa heat ( 573) 195 53.3 2.5e-06 NP_002147 (OMIM: 118190,605280,612233) 60 kDa heat ( 573) 195 53.3 2.5e-06 NP_078961 (OMIM: 610148,615987) Bardet-Biedl syndr ( 723) 149 43.2 0.0034 >>NP_110379 (OMIM: 186980) T-complex protein 1 subunit a (556 aa) initn: 3500 init1: 3500 opt: 3500 Z-score: 4171.9 bits: 781.8 E(85289): 0 Smith-Waterman score: 3500; 100.0% identity (100.0% similar) in 556 aa overlap (1-556:1-556) 10 20 30 40 50 60 pF1KE1 MEGPLSVFGDRSTGETIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_110 MEGPLSVFGDRSTGETIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGAT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 ILKLLEVEHPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_110 ILKLLEVEHPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISG 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 YRLACKEAVRYINENLIVNTDELGRDCLINAAKTSMSSKIIGINGDFFANMVVDAVLAIK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_110 YRLACKEAVRYINENLIVNTDELGRDCLINAAKTSMSSKIIGINGDFFANMVVDAVLAIK 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 YTDIRGQPRYPVNSVNILKAHGRSQMESMLISGYALNCVVGSQGMPKRIVNAKIACLDFS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_110 YTDIRGQPRYPVNSVNILKAHGRSQMESMLISGYALNCVVGSQGMPKRIVNAKIACLDFS 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 LQKTKMKLGVQVVITDPEKLDQIRQRESDITKERIQKILATGANVILTTGGIDDMCLKYF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_110 LQKTKMKLGVQVVITDPEKLDQIRQRESDITKERIQKILATGANVILTTGGIDDMCLKYF 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 VEAGAMAVRRVLKRDLKRIAKASGATILSTLANLEGEETFEAAMLGQAEEVVQERICDDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_110 VEAGAMAVRRVLKRDLKRIAKASGATILSTLANLEGEETFEAAMLGQAEEVVQERICDDE 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE1 LILIKNTKARTSASIILRGANDFMCDEMERSLHDALCVVKRVLESKSVVPGGGAVEAALS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_110 LILIKNTKARTSASIILRGANDFMCDEMERSLHDALCVVKRVLESKSVVPGGGAVEAALS 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE1 IYLENYATSMGSREQLAIAEFARSLLVIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_110 IYLENYATSMGSREQLAIAEFARSLLVIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPER 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE1 KNLKWIGLDLSNGKPRDNKQAGVFEPTIVKVKSLKFATEAAITILRIDDLIKLHPESKDD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_110 KNLKWIGLDLSNGKPRDNKQAGVFEPTIVKVKSLKFATEAAITILRIDDLIKLHPESKDD 490 500 510 520 530 540 550 pF1KE1 KHGSYEDAVHSGALND :::::::::::::::: NP_110 KHGSYEDAVHSGALND 550 >>NP_001008897 (OMIM: 186980) T-complex protein 1 subuni (401 aa) initn: 2534 init1: 2534 opt: 2534 Z-score: 3023.3 bits: 568.8 E(85289): 1.2e-161 Smith-Waterman score: 2534; 100.0% identity (100.0% similar) in 401 aa overlap (156-556:1-401) 130 140 150 160 170 180 pF1KE1 KEAVRYINENLIVNTDELGRDCLINAAKTSMSSKIIGINGDFFANMVVDAVLAIKYTDIR :::::::::::::::::::::::::::::: NP_001 MSSKIIGINGDFFANMVVDAVLAIKYTDIR 10 20 30 190 200 210 220 230 240 pF1KE1 GQPRYPVNSVNILKAHGRSQMESMLISGYALNCVVGSQGMPKRIVNAKIACLDFSLQKTK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 GQPRYPVNSVNILKAHGRSQMESMLISGYALNCVVGSQGMPKRIVNAKIACLDFSLQKTK 40 50 60 70 80 90 250 260 270 280 290 300 pF1KE1 MKLGVQVVITDPEKLDQIRQRESDITKERIQKILATGANVILTTGGIDDMCLKYFVEAGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MKLGVQVVITDPEKLDQIRQRESDITKERIQKILATGANVILTTGGIDDMCLKYFVEAGA 100 110 120 130 140 150 310 320 330 340 350 360 pF1KE1 MAVRRVLKRDLKRIAKASGATILSTLANLEGEETFEAAMLGQAEEVVQERICDDELILIK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MAVRRVLKRDLKRIAKASGATILSTLANLEGEETFEAAMLGQAEEVVQERICDDELILIK 160 170 180 190 200 210 370 380 390 400 410 420 pF1KE1 NTKARTSASIILRGANDFMCDEMERSLHDALCVVKRVLESKSVVPGGGAVEAALSIYLEN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 NTKARTSASIILRGANDFMCDEMERSLHDALCVVKRVLESKSVVPGGGAVEAALSIYLEN 220 230 240 250 260 270 430 440 450 460 470 480 pF1KE1 YATSMGSREQLAIAEFARSLLVIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPERKNLKW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 YATSMGSREQLAIAEFARSLLVIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPERKNLKW 280 290 300 310 320 330 490 500 510 520 530 540 pF1KE1 IGLDLSNGKPRDNKQAGVFEPTIVKVKSLKFATEAAITILRIDDLIKLHPESKDDKHGSY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 IGLDLSNGKPRDNKQAGVFEPTIVKVKSLKFATEAAITILRIDDLIKLHPESKDDKHGSY 340 350 360 370 380 390 550 pF1KE1 EDAVHSGALND ::::::::::: NP_001 EDAVHSGALND 400 >>NP_006420 (OMIM: 605140) T-complex protein 1 subunit e (543 aa) initn: 991 init1: 377 opt: 903 Z-score: 1078.4 bits: 209.3 E(85289): 2.5e-53 Smith-Waterman score: 1015; 36.8% identity (65.6% similar) in 538 aa overlap (10-540:14-528) 10 20 30 40 50 pF1KE1 MEGPLSVFGDRSTGETIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITN : : : .:. : ::. :...::: :.::..:: : .::.: NP_006 MMPTPVILLKEGTDSSQGIPQLVSNISACQVIAEAVRTTLGPRGMDKLIVDGRGKATISN 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE1 DGATILKLLEVEHPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTS :::::::::.: :::::.: ..: :: :::::::::...:::.::.. :.. .:: NP_006 DGATILKLLDVVHPAAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQI 70 80 90 100 110 120 120 130 140 150 160 170 pF1KE1 VISGYRLACKEAVRYINENLIV--NTDEL-GRDCLINAAKTSMSSKIIGINGDFFANMVV .: ..: : . :: :.: .. ..:.. : : . : :..:::.:. . :::.::: NP_006 IIRAFRTATQLAVNKIKEIAVTVKKADKVEQRKLLEKCAMTALSSKLISQQKAFFAKMVV 130 140 150 160 170 180 180 190 200 210 220 230 pF1KE1 DAVLAIKYTDIRGQPRYPVNSVNILKAHGRSQMESMLISGYALN---CVVGSQGMPKRIV :::. . :. .. ..: :..: . .:.:..: :.. .: . .::. NP_006 DAVMMLD--DL-----LQLKMIGIKKVQGGALEDSQLVAGVAFKKTFSYAGFEMQPKKYH 190 200 210 220 230 240 250 260 270 280 290 pF1KE1 NAKIACLDFSLQKTKMKLGVQVVITDPEKLDQIRQRESDITKERIQKILATGANVILTTG : ::: :. :. : .... . : . : . : .: ....:: .::.:.:. NP_006 NPKIALLNVELELKAEKDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVLSKL 240 250 260 270 280 290 300 310 320 330 340 350 pF1KE1 GIDDMCLKYFVEAGAMAVRRVLKRDLKRIAKASGATILSTLANLEGEETFEAAMLGQAEE : :. .::.. . . :: ..:::: : :..: ... : : .::. . NP_006 PIGDVATQYFADRDMFCAGRVPEEDLKRTMMACGGSIQTSVNAL------SADVLGRCQV 300 310 320 330 340 360 370 380 390 400 pF1KE1 VVQERICDDELILIKNT-KARTSASIILRGANDFMCDEMERSLHDALCVVKRVLESKSVV . .: .. .. . ::.: . :. ::..:: .: :::::::. .:.:.... ::: NP_006 FEETQIGGERYNFFTGCPKAKTCTFILRGGAEQFM-EETERSLHDAIMIVRRAIKNDSVV 350 360 370 380 390 400 410 420 430 440 450 460 pF1KE1 PGGGAVEAALSIYLENYATSMGSREQLAIAEFARSLLVIPNTLAVNAAQDSTDLVAKLRA ::::.: :: ::..:. .. ...:: :. .:..: .:: : ::. :.:... :::: NP_006 AGGGAIEMELSKYLRDYSRTIPGKQQLLIGAYAKALEIIPRQLCDNAGFDATNILNKLRA 410 420 430 440 450 460 470 480 490 500 510 520 pF1KE1 FHNEAQVNPERKNLKWIGLDLSNGKPRDNKQAGVFEPTIVKVKSLKFATEAAITILRIDD : .. . : :.:..: :: .: :.::..:....: :.::: :. .:. NP_006 RHAQGGT--------WYGVDINNEDIADNFEAFVWEPAMVRINALTAASEAACLIVSVDE 470 480 490 500 510 530 540 550 pF1KE1 LIKLHPESKDDKHGSYEDAVHSGALND :: .:.: : NP_006 TIK-NPRSTVDAPTAAGRGRGRGRPH 520 530 540 >>NP_006421 (OMIM: 605142) T-complex protein 1 subunit d (539 aa) initn: 695 init1: 395 opt: 874 Z-score: 1043.9 bits: 202.9 E(85289): 2.1e-51 Smith-Waterman score: 943; 33.0% identity (66.0% similar) in 533 aa overlap (8-531:24-536) 10 20 30 40 pF1KE1 MEGPLSVFGDRSTGETIRSQNVMAAASIANIVKSSLGPVGLDKM . ::. :: .:. :: ..:. ...:::: :.::: NP_006 MPENVAPRSGATAGAAGGRGKGAYQDRDKPAQIRFSNISAAKAVADAIRTSLGPKGMDKM 10 20 30 40 50 60 50 60 70 80 90 100 pF1KE1 LVDDIGDVTITNDGATILKLLEVEHPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNA . : :::::::::::::: ..: ::::..: ::. :: :.:::::::::::. :: . NP_006 IQDGKGDVTITNDGATILKQMQVLHPAARMLVELSKAQDIEAGDGTTSVVIIAGSLLDSC 70 80 90 100 110 120 110 120 130 140 150 160 pF1KE1 DELVKQKIHPTSVISGYRLACKEAVRYINENLIVNTDELG-RDCLINAAKTSMSSKIIGI .:... :::: . ... : ..... ... . ::. :. :.:.: ::..::... NP_006 TKLLQKGIHPTIISESFQKALEKGIEILTD--MSRPVELSDRETLLNSATTSLNSKVVSQ 130 140 150 160 170 170 180 190 200 210 220 pF1KE1 NGDFFANMVVDAVLAIKYTDIRGQPRYPVNSVNILKAHGRSQMESMLISGYALNCVVGSQ ..... : :.::. : : . ...:.: : . . :. : .:. :... NP_006 YSSLLSPMSVNAVM--KVIDPATATSVDLRDIKIVKKLGGTIDDCELVEGLVLTQKVSNS 180 190 200 210 220 230 230 240 250 260 270 280 pF1KE1 GMPKRIVNAKIACLDFSLQKTKMKLGVQVVITDPEKLDQIRQRESDITKERIQKILATGA :. :. .:::. ..: :. : . :.:..: ..:.. ..: . ...: :: NP_006 GIT-RVEKAKIGLIQFCLSAPKTDMDNQIVVSDYAQMDRVLREERAYILNLVKQIKKTGC 240 250 260 270 280 290 290 300 310 320 330 pF1KE1 NVILTTGGI-----DDMCLKYFVEAGAMAVRRVLKRDLKRIAKASGATILSTLANLEGEE ::.: .: .:. :... . :... . ..:.. : :. :. . .:... NP_006 NVLLIQKSILRDALSDLALHFLNKMKIMVIKDIEREDIEFICKTIGT---KPVAHID--- 300 310 320 330 340 340 350 360 370 380 390 pF1KE1 TFEAAMLGQAEEVVQERICDDELILIKNTKART---SASIILRGANDFMCDEMERSLHDA : : :::.:: ...: . :.: : . ...:..::.: .. .: :::.::: NP_006 QFTADMLGSAE-LAEEVNLNGSGKLLKITGCASPGKTVTIVVRGSNKLVIEEAERSIHDA 350 360 370 380 390 400 400 410 420 430 440 450 pF1KE1 LCVVKRVLESKSVVPGGGAVEAALSIYLENYATSMGSREQLAIAEFARSLLVIPNTLAVN :::.. ........ :::: : :.. : .:. .... :. . :: .. :::.::: : NP_006 LCVIRCLVKKRALIAGGGAPEIELALRLTEYSRTLSGMESYCVRAFADAMEVIPSTLAEN 410 420 430 440 450 460 460 470 480 490 500 510 pF1KE1 AAQDSTDLVAKLRAFHNEAQVNPERKNLKWIGLDLSNGKPRDNKQAGVFEPTIVKVKSLK :. . . :..:: : ... : :... .: . . : .: .:.:..: NP_006 AGLNPISTVTELRNRHAQGE--------KTAGINVRKGGISNILEELVVQPLLVSVSALT 470 480 490 500 510 520 520 530 540 550 pF1KE1 FATEAAITILRIDDLIKLHPESKDDKHGSYEDAVHSGALND .:::.. .::.:::.. NP_006 LATETVRSILKIDDVVNTR 530 >>NP_005989 (OMIM: 600114) T-complex protein 1 subunit g (545 aa) initn: 844 init1: 393 opt: 848 Z-score: 1012.8 bits: 197.2 E(85289): 1.1e-49 Smith-Waterman score: 981; 34.0% identity (65.1% similar) in 541 aa overlap (11-548:16-542) 10 20 30 40 50 pF1KE1 MEGPLSVFGDRSTGETIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTIT : .:. ..: :. :: .::.:... ::: .. :::.: .: ...: NP_005 MMGHRPVLVLSQNTKRESGRKVQSGNINAAKTIADIIRTCLGPKSMMKMLLDPMGGIVMT 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE1 NDGATILKLLEVEHPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPT ::: .::. ..:.::::: . :.. ::.:::::::::.:.:.:.:. :.....:..::: NP_005 NDGNAILREIQVQHPAAKSMIEISRTQDEEVGDGTTSVIILAGEMLSVAEHFLEQQMHPT 70 80 90 100 110 120 120 130 140 150 160 170 pF1KE1 SVISGYRLACKEAVRYINENLIVNTDELGRDCLINAAKTSMSSKIIGINGDFFANMVVDA :::.:: : . . . ... . .: : ..: ..:...: :. ... :...:: NP_005 VVISAYRKALDDMISTL-KKISIPVDISDSDMMLNIINSSITTKAISRWSSLACNIALDA 130 140 150 160 170 180 190 200 210 220 230 pF1KE1 VLAIKYTDIRGQPRYPVNS-VNILKAHGRSQMESMLISGYALNCVVGSQGMPKRIVNAKI : ... . :. . ... . . : : .: .. : .: : : . : : .: NP_005 VKMVQFEE-NGRKEIDIKKYARVEKIPGGIIEDSCVLRGVMINKDVTHPRMRRYIKNPRI 180 190 200 210 220 230 240 250 260 270 280 290 pF1KE1 ACLDFSLQKTKMKLGVQVVITDPEKLDQIRQRESDITKERIQKILATGANVILTTGGIDD . :: ::. : . ... :: : . .: : : . .. . :. .:..: ::.: NP_005 VLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIQQLCEDIIQLKPDVVITEKGISD 240 250 260 270 280 290 300 310 320 330 340 350 pF1KE1 MCLKYFVEAGAMAVRRVLKRDLKRIAKASGATILSTLANLEGEETFEAAMLGQAEEVVQE . .:...:. :.::: : : .:::.: :: :.: .:. ... .: : . . NP_005 LAQHYLMRANITAIRRVRKTDNNRIARACGARIVSRPEELREDDVGTGAGLLEIK----- 300 310 320 330 340 350 360 370 380 390 400 410 pF1KE1 RICDDELILIKNTKARTSASIILRGANDFMCDEMERSLHDALCVVKRVLESKSVVPGGGA .: :. . .: . : . .:.::::. . .:.::.:.::. : . :: . ..:::::: NP_005 KIGDEYFTFITDCKDPKACTILLRGASKEILSEVERNLQDAMQVCRNVLLDPQLVPGGGA 360 370 380 390 400 410 420 430 440 450 460 470 pF1KE1 VEAALSIYLENYATSMGSREQLAIAEFARSLLVIPNTLAVNAAQDSTDLVAKLRAFHNEA : :.. : . . .: . :: :..: ::: :: : . .. :...::: : . NP_005 SEMAVAHALTEKSKAMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRLLTSLRAKH--T 420 430 440 450 460 470 480 490 500 510 520 530 pF1KE1 QVNPERKNLKWIGLDLSNGKPRDNKQAGVFEPTIVKVKSLKFATEAAITILRIDDLIKLH : : : : :.. .: : :. :..:: ::... : :.:.:. .:::::... : NP_005 QENCET----W-GVNGETGTLVDMKELGIWEPLAVKLQTYKTAVETAVLLLRIDDIVSGH 480 490 500 510 520 540 550 pF1KE1 PESKDD--KHGSYEDAVHSGALND .. :: ..:. :: NP_005 KKKGDDQSRQGGAPDAGQE 530 540 >>NP_001293082 (OMIM: 256840,610150) T-complex protein 1 (520 aa) initn: 912 init1: 403 opt: 844 Z-score: 1008.4 bits: 196.3 E(85289): 2e-49 Smith-Waterman score: 909; 33.3% identity (67.5% similar) in 532 aa overlap (10-532:2-514) 10 20 30 40 50 pF1KE1 MEGPLSVFGDRSTGETIRS---QNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITND . : : ::.. ...::: ..:: ...:::: :::::.:: ::::.::: NP_001 MNSSLGPTIEKLSVSHIMAAKAVANTMRTSLGPNGLDKMMVDKDGDVTVTND 10 20 30 40 50 60 70 80 90 100 110 pF1KE1 GATILKLLEVEHPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSV :::::....:.: ::.. ::. :: :.:::::.::..:. ::..:..:. . ::: . NP_001 GATILSMMDVDHQIAKLMVELSKSQDDEIGDGTTGVVVLAGALLEEAEQLLDRGIHPIRI 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE1 ISGYRLACKEAVRY---INENLIVNTDELGRDCLINAAKTSMSSKIIGINGDFFANMVVD .::. : . :... :.....:. . . ::..:::...::... .:...:. NP_001 ADGYEQAARVAIEHLDKISDSVLVDIKDT--EPLIQTAKTTLGSKVVNSCHRQMAEIAVN 120 130 140 150 160 170 180 190 200 210 220 230 pF1KE1 AVLAIKYTDIRGQPRYPVNSVNILKAHGR--SQME-SMLISGYALNCVVGSQGMPKRIVN :::.. .:.. : :. ...:..:. ...: . ::.: .. . :::.. . NP_001 AVLTV--ADME---RRDVD-FELIKVEGKVGGRLEDTKLIKGVIVDKDFSHPQMPKKVED 180 190 200 210 220 240 250 260 270 280 290 pF1KE1 AKIACLDFSLQKTKMKLGVQVVITDPEKLDQIRQRESDITKERIQKILATGANVILTTGG :::: : .. : : .. .:. : ... :.. .: ::.: ::::. . : NP_001 AKIAILTCPFEPPKPKTKHKLDVTSVEDYKALQKYEKEKFEEMIQQIKETGANLAICQWG 230 240 250 260 270 280 300 310 320 330 340 350 pF1KE1 IDDMCLKYFVEAGAMAVRRVLKRDLKRIAKASGATILSTLANLEGEETFEAAMLGQAEEV .:: . ... . ::: : ... :: :.:. :. ...: .:. .. : ..:. NP_001 FDDEANHLLLQNNLPAVRWVGGPEIELIAIATGGRIVPRFSELTAEKL---GFAGLVQEI 290 300 310 320 330 340 360 370 380 390 400 410 pF1KE1 VQERICDDELILIKNTKARTSASIILRGANDFMCDEMERSLHDALCVVKRVLESKSVVPG . :....:.. : ...:..::.: .. .: .:::::::::.. ..... :: : NP_001 -SFGTTKDKMLVIEQCKNSRAVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVVYG 350 360 370 380 390 400 420 430 440 450 460 470 pF1KE1 GGAVEAALSIYLENYATSMGSREQLAIAEFARSLLVIPNTLAVNAAQDSTDLVAKLRAFH :::.: . .. . . : . . :: :. :: .: ::: .:. :.... . ....:: . NP_001 GGAAEISCALAVSQEADKCPTLEQYAMRAFADALEVIPMALSENSGMNPIQTMTEVRARQ 410 420 430 440 450 460 480 490 500 510 520 530 pF1KE1 NEAQVNPERKNLKWIGLDLSNGKPRDNKQAGVFEPTIVKVKSLKFATEAAITILRIDDLI . ..:: .:.: . : :: :.: : : .....::. . ::.:::. NP_001 VK-EMNPA------LGIDCLHKGTNDMKQQHVIETLIGKKQQISLATQMVRMILKIDDIR 470 480 490 500 510 540 550 pF1KE1 KLHPESKDDKHGSYEDAVHSGALND : NP_001 KPGESEE 520 >>NP_036205 (OMIM: 256840,610150) T-complex protein 1 su (541 aa) initn: 907 init1: 398 opt: 842 Z-score: 1005.7 bits: 195.9 E(85289): 2.8e-49 Smith-Waterman score: 907; 33.6% identity (67.7% similar) in 524 aa overlap (15-532:32-535) 10 20 30 40 pF1KE1 MEGPLSVFGDRSTGETIRSQNVMAAASIANIVKSSLGPVGLDKM :...:. .::: ..:: ...:::: ::::: NP_036 ASMGTLAFDEYGRPFLIIKDQDRKSRLMGLEALKSH-IMAAKAVANTMRTSLGPNGLDKM 10 20 30 40 50 60 50 60 70 80 90 100 pF1KE1 LVDDIGDVTITNDGATILKLLEVEHPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNA .:: ::::.::::::::....:.: ::.. ::. :: :.:::::.::..:. ::..: NP_036 MVDKDGDVTVTNDGATILSMMDVDHQIAKLMVELSKSQDDEIGDGTTGVVVLAGALLEEA 70 80 90 100 110 120 110 120 130 140 150 160 pF1KE1 DELVKQKIHPTSVISGYRLACKEAVRY---INENLIVNTDELGRDCLINAAKTSMSSKII ..:. . ::: . .::. : . :... :.....:. . . ::..:::...::.. NP_036 EQLLDRGIHPIRIADGYEQAARVAIEHLDKISDSVLVDIKDT--EPLIQTAKTTLGSKVV 130 140 150 160 170 170 180 190 200 210 pF1KE1 GINGDFFANMVVDAVLAIKYTDIRGQPRYPVNSVNILKAHGR--SQME-SMLISGYALNC . .:...:.:::.. .:.. : :. ...:..:. ...: . ::.: .. NP_036 NSCHRQMAEIAVNAVLTV--ADME---RRDVD-FELIKVEGKVGGRLEDTKLIKGVIVDK 180 190 200 210 220 230 220 230 240 250 260 270 pF1KE1 VVGSQGMPKRIVNAKIACLDFSLQKTKMKLGVQVVITDPEKLDQIRQRESDITKERIQKI . :::.. .:::: : .. : : .. .:. : ... :.. .: ::.: NP_036 DFSHPQMPKKVEDAKIAILTCPFEPPKPKTKHKLDVTSVEDYKALQKYEKEKFEEMIQQI 240 250 260 270 280 290 280 290 300 310 320 330 pF1KE1 LATGANVILTTGGIDDMCLKYFVEAGAMAVRRVLKRDLKRIAKASGATILSTLANLEGEE ::::. . :.:: . ... . ::: : ... :: :.:. :. ...: .:. NP_036 KETGANLAICQWGFDDEANHLLLQNNLPAVRWVGGPEIELIAIATGGRIVPRFSELTAEK 300 310 320 330 340 350 340 350 360 370 380 390 pF1KE1 TFEAAMLGQAEEVVQERICDDELILIKNTKARTSASIILRGANDFMCDEMERSLHDALCV : : ..:. . :....:.. : ...:..::.: .. .: .::::::::: NP_036 LGFA---GLVQEI-SFGTTKDKMLVIEQCKNSRAVTIFIRGGNKMIIEEAKRSLHDALCV 360 370 380 390 400 400 410 420 430 440 450 pF1KE1 VKRVLESKSVVPGGGAVEAALSIYLENYATSMGSREQLAIAEFARSLLVIPNTLAVNAAQ .. ..... :: ::::.: . .. . . : . . :: :. :: .: ::: .:. :... NP_036 IRNLIRDNRVVYGGGAAEISCALAVSQEADKCPTLEQYAMRAFADALEVIPMALSENSGM 410 420 430 440 450 460 460 470 480 490 500 510 pF1KE1 DSTDLVAKLRAFHNEAQVNPERKNLKWIGLDLSNGKPRDNKQAGVFEPTIVKVKSLKFAT . . ....:: .. ..:: .:.: . : :: :.: : : .....:: NP_036 NPIQTMTEVRA-RQVKEMNPA------LGIDCLHKGTNDMKQQHVIETLIGKKQQISLAT 470 480 490 500 510 520 520 530 540 550 pF1KE1 EAAITILRIDDLIKLHPESKDDKHGSYEDAVHSGALND . . ::.:::. : NP_036 QMVRMILKIDDIRKPGESEE 530 540 >>NP_001159757 (OMIM: 605140) T-complex protein 1 subuni (499 aa) initn: 932 init1: 318 opt: 838 Z-score: 1001.5 bits: 195.0 E(85289): 4.8e-49 Smith-Waterman score: 950; 36.7% identity (66.1% similar) in 507 aa overlap (41-540:1-484) 20 30 40 50 60 70 pF1KE1 RSTGETIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHP .::..:: : .::.::::::::::.: :: NP_001 MDKLIVDGRGKATISNDGATILKLLDVVHP 10 20 30 80 90 100 110 120 130 pF1KE1 AAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVR :::.: ..: :: :::::::::...:::.::.. :.. .:: .: ..: : . :: NP_001 AAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVN 40 50 60 70 80 90 140 150 160 170 180 pF1KE1 YINENLIV--NTDEL-GRDCLINAAKTSMSSKIIGINGDFFANMVVDAVLAIKYTDIRGQ :.: .. ..:.. : : . : :..:::.:. . :::.::::::. . :. NP_001 KIKEIAVTVKKADKVEQRKLLEKCAMTALSSKLISQQKAFFAKMVVDAVMMLD--DL--- 100 110 120 130 140 190 200 210 220 230 240 pF1KE1 PRYPVNSVNILKAHGRSQMESMLISGYALN---CVVGSQGMPKRIVNAKIACLDFSLQKT .. ..: :..: . .:.:..: :.. .: . .::. : ::: :. :. NP_001 --LQLKMIGIKKVQGGALEDSQLVAGVAFKKTFSYAGFEMQPKKYHNPKIALLNVELELK 150 160 170 180 190 200 250 260 270 280 290 300 pF1KE1 KMKLGVQVVITDPEKLDQIRQRESDITKERIQKILATGANVILTTGGIDDMCLKYFVEAG : .... . : . : . : .: ....:: .::.:.:. : :. .::.. NP_001 AEKDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVLSKLPIGDVATQYFADRD 210 220 230 240 250 260 310 320 330 340 350 360 pF1KE1 AMAVRRVLKRDLKRIAKASGATILSTLANLEGEETFEAAMLGQAEEVVQERICDDELILI . . :: ..:::: : :..: ... : : .::. . . .: .. .. NP_001 MFCAGRVPEEDLKRTMMACGGSIQTSVNALS------ADVLGRCQVFEETQIGGERYNFF 270 280 290 300 310 370 380 390 400 410 420 pF1KE1 KNT-KARTSASIILRGANDFMCDEMERSLHDALCVVKRVLESKSVVPGGGAVEAALSIYL . ::.: . :. ::..:: .: :::::::. .:.:.... ::: ::::.: :: :: NP_001 TGCPKAKTCTFILRGGAEQFM-EETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYL 320 330 340 350 360 370 430 440 450 460 470 480 pF1KE1 ENYATSMGSREQLAIAEFARSLLVIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPERKNL ..:. .. ...:: :. .:..: .:: : ::. :.:... :::: : .. . NP_001 RDYSRTIPGKQQLLIGAYAKALEIIPRQLCDNAGFDATNILNKLRARHAQGGT------- 380 390 400 410 420 490 500 510 520 530 540 pF1KE1 KWIGLDLSNGKPRDNKQAGVFEPTIVKVKSLKFATEAAITILRIDDLIKLHPESKDDKHG : :.:..: :: .: :.::..:....: :.::: :. .:. :: .:.: : NP_001 -WYGVDINNEDIADNFEAFVWEPAMVRINALTAASEAACLIVSVDETIK-NPRSTVDAPT 430 440 450 460 470 480 550 pF1KE1 SYEDAVHSGALND NP_001 AAGRGRGRGRPH 490 >>XP_011530781 (OMIM: 605140) PREDICTED: T-complex prote (499 aa) initn: 932 init1: 318 opt: 838 Z-score: 1001.5 bits: 195.0 E(85289): 4.8e-49 Smith-Waterman score: 950; 36.7% identity (66.1% similar) in 507 aa overlap (41-540:1-484) 20 30 40 50 60 70 pF1KE1 RSTGETIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHP .::..:: : .::.::::::::::.: :: XP_011 MDKLIVDGRGKATISNDGATILKLLDVVHP 10 20 30 80 90 100 110 120 130 pF1KE1 AAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVR :::.: ..: :: :::::::::...:::.::.. :.. .:: .: ..: : . :: XP_011 AAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVN 40 50 60 70 80 90 140 150 160 170 180 pF1KE1 YINENLIV--NTDEL-GRDCLINAAKTSMSSKIIGINGDFFANMVVDAVLAIKYTDIRGQ :.: .. ..:.. : : . : :..:::.:. . :::.::::::. . :. XP_011 KIKEIAVTVKKADKVEQRKLLEKCAMTALSSKLISQQKAFFAKMVVDAVMMLD--DL--- 100 110 120 130 140 190 200 210 220 230 240 pF1KE1 PRYPVNSVNILKAHGRSQMESMLISGYALN---CVVGSQGMPKRIVNAKIACLDFSLQKT .. ..: :..: . .:.:..: :.. .: . .::. : ::: :. :. XP_011 --LQLKMIGIKKVQGGALEDSQLVAGVAFKKTFSYAGFEMQPKKYHNPKIALLNVELELK 150 160 170 180 190 200 250 260 270 280 290 300 pF1KE1 KMKLGVQVVITDPEKLDQIRQRESDITKERIQKILATGANVILTTGGIDDMCLKYFVEAG : .... . : . : . : .: ....:: .::.:.:. : :. .::.. XP_011 AEKDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVLSKLPIGDVATQYFADRD 210 220 230 240 250 260 310 320 330 340 350 360 pF1KE1 AMAVRRVLKRDLKRIAKASGATILSTLANLEGEETFEAAMLGQAEEVVQERICDDELILI . . :: ..:::: : :..: ... : : .::. . . .: .. .. XP_011 MFCAGRVPEEDLKRTMMACGGSIQTSVNALS------ADVLGRCQVFEETQIGGERYNFF 270 280 290 300 310 370 380 390 400 410 420 pF1KE1 KNT-KARTSASIILRGANDFMCDEMERSLHDALCVVKRVLESKSVVPGGGAVEAALSIYL . ::.: . :. ::..:: .: :::::::. .:.:.... ::: ::::.: :: :: XP_011 TGCPKAKTCTFILRGGAEQFM-EETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYL 320 330 340 350 360 370 430 440 450 460 470 480 pF1KE1 ENYATSMGSREQLAIAEFARSLLVIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPERKNL ..:. .. ...:: :. .:..: .:: : ::. :.:... :::: : .. . XP_011 RDYSRTIPGKQQLLIGAYAKALEIIPRQLCDNAGFDATNILNKLRARHAQGGT------- 380 390 400 410 420 490 500 510 520 530 540 pF1KE1 KWIGLDLSNGKPRDNKQAGVFEPTIVKVKSLKFATEAAITILRIDDLIKLHPESKDDKHG : :.:..: :: .: :.::..:....: :.::: :. .:. :: .:.: : XP_011 -WYGVDINNEDIADNFEAFVWEPAMVRINALTAASEAACLIVSVDETIK-NPRSTVDAPT 430 440 450 460 470 480 550 pF1KE1 SYEDAVHSGALND XP_011 AAGRGRGRGRPH 490 >>XP_011530780 (OMIM: 605140) PREDICTED: T-complex prote (499 aa) initn: 932 init1: 318 opt: 838 Z-score: 1001.5 bits: 195.0 E(85289): 4.8e-49 Smith-Waterman score: 950; 36.7% identity (66.1% similar) in 507 aa overlap (41-540:1-484) 20 30 40 50 60 70 pF1KE1 RSTGETIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHP .::..:: : .::.::::::::::.: :: XP_011 MDKLIVDGRGKATISNDGATILKLLDVVHP 10 20 30 80 90 100 110 120 130 pF1KE1 AAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVR :::.: ..: :: :::::::::...:::.::.. :.. .:: .: ..: : . :: XP_011 AAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVN 40 50 60 70 80 90 140 150 160 170 180 pF1KE1 YINENLIV--NTDEL-GRDCLINAAKTSMSSKIIGINGDFFANMVVDAVLAIKYTDIRGQ :.: .. ..:.. : : . : :..:::.:. . :::.::::::. . :. XP_011 KIKEIAVTVKKADKVEQRKLLEKCAMTALSSKLISQQKAFFAKMVVDAVMMLD--DL--- 100 110 120 130 140 190 200 210 220 230 240 pF1KE1 PRYPVNSVNILKAHGRSQMESMLISGYALN---CVVGSQGMPKRIVNAKIACLDFSLQKT .. ..: :..: . .:.:..: :.. .: . .::. : ::: :. :. XP_011 --LQLKMIGIKKVQGGALEDSQLVAGVAFKKTFSYAGFEMQPKKYHNPKIALLNVELELK 150 160 170 180 190 200 250 260 270 280 290 300 pF1KE1 KMKLGVQVVITDPEKLDQIRQRESDITKERIQKILATGANVILTTGGIDDMCLKYFVEAG : .... . : . : . : .: ....:: .::.:.:. : :. .::.. XP_011 AEKDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVLSKLPIGDVATQYFADRD 210 220 230 240 250 260 310 320 330 340 350 360 pF1KE1 AMAVRRVLKRDLKRIAKASGATILSTLANLEGEETFEAAMLGQAEEVVQERICDDELILI . . :: ..:::: : :..: ... : : .::. . . .: .. .. XP_011 MFCAGRVPEEDLKRTMMACGGSIQTSVNALS------ADVLGRCQVFEETQIGGERYNFF 270 280 290 300 310 370 380 390 400 410 420 pF1KE1 KNT-KARTSASIILRGANDFMCDEMERSLHDALCVVKRVLESKSVVPGGGAVEAALSIYL . ::.: . :. ::..:: .: :::::::. .:.:.... ::: ::::.: :: :: XP_011 TGCPKAKTCTFILRGGAEQFM-EETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYL 320 330 340 350 360 370 430 440 450 460 470 480 pF1KE1 ENYATSMGSREQLAIAEFARSLLVIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPERKNL ..:. .. ...:: :. .:..: .:: : ::. :.:... :::: : .. . XP_011 RDYSRTIPGKQQLLIGAYAKALEIIPRQLCDNAGFDATNILNKLRARHAQGGT------- 380 390 400 410 420 490 500 510 520 530 540 pF1KE1 KWIGLDLSNGKPRDNKQAGVFEPTIVKVKSLKFATEAAITILRIDDLIKLHPESKDDKHG : :.:..: :: .: :.::..:....: :.::: :. .:. :: .:.: : XP_011 -WYGVDINNEDIADNFEAFVWEPAMVRINALTAASEAACLIVSVDETIK-NPRSTVDAPT 430 440 450 460 470 480 550 pF1KE1 SYEDAVHSGALND XP_011 AAGRGRGRGRPH 490 556 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 15:36:14 2016 done: Mon Nov 7 15:36:16 2016 Total Scan time: 9.480 Total Display time: 0.120 Function used was FASTA [36.3.4 Apr, 2011]