FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE2789, 227 aa 1>>>pF1KE2789 227 - 227 aa - 227 aa Library: human.CCDS.faa 18921897 residues in 33420 sequences Statistics: Expectation_n fit: rho(ln(x))= 13.8982+/-0.00107; mu= -21.6809+/- 0.065 mean_var=524.2203+/-106.197, 0's: 0 Z-trim(117.4): 8 B-trim: 263 in 1/51 Lambda= 0.056017 statistics sampled from 18331 (18338) to 18331 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.794), E-opt: 0.2 (0.549), width: 16 Scan time: 1.230 The best scores are: opt bits E(33420) CCDS3888.1 BASP1 gene_id:10409|Hs109|chr5 ( 227) 1441 129.5 1.8e-30 >>CCDS3888.1 BASP1 gene_id:10409|Hs109|chr5 (227 aa) initn: 1441 init1: 1441 opt: 1441 Z-score: 660.6 bits: 129.5 E(33420): 1.8e-30 Smith-Waterman score: 1441; 99.6% identity (99.6% similar) in 227 aa overlap (1-227:1-227) 10 20 30 40 50 60 pF1KE2 MGGKLSKKKKGYNVNDEKAKEKDKKAEGAATEEEGTPKESEPQAAAEPAEAKEGKEKPDQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS38 MGGKLSKKKKGYNVNDEKAKEKDKKAEGAATEEEGTPKESEPQAAAEPAEAKEGKEKPDQ 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 DAEGKAEEKEGEKDAAAAKEEAPKAEPEKTEGAAEAKAEPPKAPEQEQAAPGPAAGGEAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS38 DAEGKAEEKEGEKDAAAAKEEAPKAEPEKTEGAAEAKAEPPKAPEQEQAAPGPAAGGEAP 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 KAAEAAAAPAESAAPAAGEEPSKEEGEPKKTGAPAAPAAQETKSDGAPASDSKPGSSEAA ::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::: CCDS38 KAAEAAAAPAESAAPAAGEEPSKEEGEPKKTEAPAAPAAQETKSDGAPASDSKPGSSEAA 130 140 150 160 170 180 190 200 210 220 pF1KE2 PSSKETPAATEAPSSTPKAQGPAASAEEPKPVEAPAANSDQTVTVKE ::::::::::::::::::::::::::::::::::::::::::::::: CCDS38 PSSKETPAATEAPSSTPKAQGPAASAEEPKPVEAPAANSDQTVTVKE 190 200 210 220 227 residues in 1 query sequences 18921897 residues in 33420 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Fri Feb 19 20:41:45 2021 done: Fri Feb 19 20:41:45 2021 Total Scan time: 1.230 Total Display time: 0.020 Function used was FASTA [36.3.4 Apr, 2011]