FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3670, 493 aa 1>>>pF1KE3670 493 - 493 aa - 493 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.4484+/-0.000385; mu= 15.2407+/- 0.024 mean_var=154.5885+/-31.280, 0's: 0 Z-trim(117.7): 105 B-trim: 128 in 2/50 Lambda= 0.103154 statistics sampled from 29915 (30020) to 29915 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.701), E-opt: 0.2 (0.352), width: 16 Scan time: 8.380 The best scores are: opt bits E(85289) XP_016861020 (OMIM: 605615) PREDICTED: E3 ubiquiti ( 493) 3509 534.2 3.2e-151 NP_006312 (OMIM: 605615) E3 ubiquitin-protein liga ( 493) 3509 534.2 3.2e-151 NP_001304262 (OMIM: 605615) E3 ubiquitin-protein l ( 493) 3509 534.2 3.2e-151 XP_016861021 (OMIM: 605615) PREDICTED: E3 ubiquiti ( 493) 3509 534.2 3.2e-151 XP_016861027 (OMIM: 605615) PREDICTED: E3 ubiquiti ( 421) 2941 449.6 8e-126 XP_016861026 (OMIM: 605615) PREDICTED: E3 ubiquiti ( 421) 2941 449.6 8e-126 XP_011531577 (OMIM: 605615) PREDICTED: E3 ubiquiti ( 421) 2941 449.6 8e-126 XP_016861028 (OMIM: 605615) PREDICTED: E3 ubiquiti ( 421) 2941 449.6 8e-126 XP_016861025 (OMIM: 605615) PREDICTED: E3 ubiquiti ( 421) 2941 449.6 8e-126 XP_016861029 (OMIM: 605615) PREDICTED: E3 ubiquiti ( 409) 2938 449.2 1.1e-125 XP_016861030 (OMIM: 605615) PREDICTED: E3 ubiquiti ( 409) 2938 449.2 1.1e-125 NP_001304263 (OMIM: 605615) E3 ubiquitin-protein l ( 351) 2542 390.1 5.3e-108 XP_011531567 (OMIM: 605615) PREDICTED: E3 ubiquiti ( 516) 2308 355.5 2.1e-97 XP_011531568 (OMIM: 605615) PREDICTED: E3 ubiquiti ( 516) 2308 355.5 2.1e-97 XP_011531570 (OMIM: 605615) PREDICTED: E3 ubiquiti ( 516) 2308 355.5 2.1e-97 XP_011531569 (OMIM: 605615) PREDICTED: E3 ubiquiti ( 516) 2308 355.5 2.1e-97 XP_016861022 (OMIM: 605615) PREDICTED: E3 ubiquiti ( 444) 1740 270.9 5.2e-72 XP_011531573 (OMIM: 605615) PREDICTED: E3 ubiquiti ( 444) 1740 270.9 5.2e-72 XP_011531572 (OMIM: 605615) PREDICTED: E3 ubiquiti ( 444) 1740 270.9 5.2e-72 XP_016861023 (OMIM: 605615) PREDICTED: E3 ubiquiti ( 444) 1740 270.9 5.2e-72 XP_016861024 (OMIM: 605615) PREDICTED: E3 ubiquiti ( 444) 1740 270.9 5.2e-72 XP_011531575 (OMIM: 605615) PREDICTED: E3 ubiquiti ( 432) 1737 270.4 7e-72 XP_011531578 (OMIM: 605615) PREDICTED: E3 ubiquiti ( 254) 1206 191.2 3e-48 NP_005735 (OMIM: 605624) E3 ubiquitin-protein liga ( 557) 1135 181.0 7.7e-45 XP_011519741 (OMIM: 605624) PREDICTED: E3 ubiquiti ( 465) 1114 177.8 6e-44 XP_011519740 (OMIM: 605624) PREDICTED: E3 ubiquiti ( 498) 1066 170.7 8.9e-42 XP_011512731 (OMIM: 607489) PREDICTED: cullin-9 is (1834) 588 100.2 5.5e-20 XP_016866079 (OMIM: 607489) PREDICTED: cullin-9 is (1909) 588 100.2 5.6e-20 XP_011512729 (OMIM: 607489) PREDICTED: cullin-9 is (2095) 588 100.2 6e-20 XP_011512728 (OMIM: 607489) PREDICTED: cullin-9 is (2339) 588 100.3 6.4e-20 XP_011512727 (OMIM: 607489) PREDICTED: cullin-9 is (2456) 588 100.3 6.6e-20 NP_055904 (OMIM: 607489) cullin-9 [Homo sapiens] (2517) 588 100.3 6.8e-20 XP_011512726 (OMIM: 607489) PREDICTED: cullin-9 is (2539) 588 100.3 6.8e-20 XP_011512725 (OMIM: 607489) PREDICTED: cullin-9 is (2566) 588 100.3 6.8e-20 XP_016866078 (OMIM: 607489) PREDICTED: cullin-9 is (2566) 588 100.3 6.8e-20 XP_011512724 (OMIM: 607489) PREDICTED: cullin-9 is (2566) 588 100.3 6.8e-20 XP_016867854 (OMIM: 212840,609948) PREDICTED: E3 u ( 488) 248 48.9 3.9e-05 XP_011513738 (OMIM: 212840,609948) PREDICTED: E3 u ( 488) 248 48.9 3.9e-05 NP_996999 (OMIM: 212840,609948) E3 ubiquitin-prote ( 866) 248 49.2 5.7e-05 XP_016867852 (OMIM: 212840,609948) PREDICTED: E3 u ( 866) 248 49.2 5.7e-05 NP_996994 (OMIM: 212840,609948) E3 ubiquitin-prote ( 923) 248 49.2 5.9e-05 XP_005249842 (OMIM: 212840,609948) PREDICTED: E3 u ( 923) 248 49.2 5.9e-05 NP_001297261 (OMIM: 612487) E3 ubiquitin-protein l ( 921) 227 46.1 0.00052 NP_060469 (OMIM: 612487) E3 ubiquitin-protein liga (1072) 227 46.2 0.00057 NP_054643 (OMIM: 167000,211980,600116,602544,60757 ( 316) 204 42.2 0.0027 XP_016866398 (OMIM: 167000,211980,600116,602544,60 ( 385) 204 42.3 0.0031 NP_054642 (OMIM: 167000,211980,600116,602544,60757 ( 437) 204 42.3 0.0034 XP_011534165 (OMIM: 167000,211980,600116,602544,60 ( 464) 204 42.3 0.0035 NP_004553 (OMIM: 167000,211980,600116,602544,60757 ( 465) 204 42.3 0.0035 XP_016866397 (OMIM: 167000,211980,600116,602544,60 ( 503) 204 42.4 0.0037 >>XP_016861020 (OMIM: 605615) PREDICTED: E3 ubiquitin-pr (493 aa) initn: 3509 init1: 3509 opt: 3509 Z-score: 2836.0 bits: 534.2 E(85289): 3.2e-151 Smith-Waterman score: 3509; 100.0% identity (100.0% similar) in 493 aa overlap (1-493:1-493) 10 20 30 40 50 60 pF1KE3 MSVDMNSQGSDSNEEDYDPNCEEEEEEEEDDPGDIEDYYVGVASDVEQQGADAFDPEEYQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MSVDMNSQGSDSNEEDYDPNCEEEEEEEEDDPGDIEDYYVGVASDVEQQGADAFDPEEYQ 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 FTCLTYKESEGALNEHMTSLASVLKVSHSVAKLILVNFHWQVSEILDRYKSNSAQLLVEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 FTCLTYKESEGALNEHMTSLASVLKVSHSVAKLILVNFHWQVSEILDRYKSNSAQLLVEA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 RVQPNPSKHVPTSHPPHHCAVCMQFVRKENLLSLACQHQFCRSCWEQHCSVLVKDGVGVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 RVQPNPSKHVPTSHPPHHCAVCMQFVRKENLLSLACQHQFCRSCWEQHCSVLVKDGVGVG 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 VSCMAQDCPLRTPEDFVFPLLPNEELREKYRRYLFRDYVESHYQLQLCPGADCPMVIRVQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 VSCMAQDCPLRTPEDFVFPLLPNEELREKYRRYLFRDYVESHYQLQLCPGADCPMVIRVQ 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 EPRARRVQCNRCNEVFCFKCRQMYHAPTDCATIRKWLTKCADDSETANYISAHTKDCPKC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 EPRARRVQCNRCNEVFCFKCRQMYHAPTDCATIRKWLTKCADDSETANYISAHTKDCPKC 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 NICIEKNGGCNHMQCSKCKHDFCWMCLGDWKTHGSEYYECSRYKENPDIVNQSQQAQARE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 NICIEKNGGCNHMQCSKCKHDFCWMCLGDWKTHGSEYYECSRYKENPDIVNQSQQAQARE 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE3 ALKKYLFYFERWENHNKSLQLEAQTYQRIHEKIQERVMNNLGTWIDWQYLQNAAKLLAKC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 ALKKYLFYFERWENHNKSLQLEAQTYQRIHEKIQERVMNNLGTWIDWQYLQNAAKLLAKC 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE3 RYTLQYTYPYAYYMESGPRKKLFEYQQAQLEAEIENLSWKVERADSYDRGDLENQMHIAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 RYTLQYTYPYAYYMESGPRKKLFEYQQAQLEAEIENLSWKVERADSYDRGDLENQMHIAE 430 440 450 460 470 480 490 pF1KE3 QRRRTLLKDFHDT ::::::::::::: XP_016 QRRRTLLKDFHDT 490 >>NP_006312 (OMIM: 605615) E3 ubiquitin-protein ligase A (493 aa) initn: 3509 init1: 3509 opt: 3509 Z-score: 2836.0 bits: 534.2 E(85289): 3.2e-151 Smith-Waterman score: 3509; 100.0% identity (100.0% similar) in 493 aa overlap (1-493:1-493) 10 20 30 40 50 60 pF1KE3 MSVDMNSQGSDSNEEDYDPNCEEEEEEEEDDPGDIEDYYVGVASDVEQQGADAFDPEEYQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 MSVDMNSQGSDSNEEDYDPNCEEEEEEEEDDPGDIEDYYVGVASDVEQQGADAFDPEEYQ 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 FTCLTYKESEGALNEHMTSLASVLKVSHSVAKLILVNFHWQVSEILDRYKSNSAQLLVEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 FTCLTYKESEGALNEHMTSLASVLKVSHSVAKLILVNFHWQVSEILDRYKSNSAQLLVEA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 RVQPNPSKHVPTSHPPHHCAVCMQFVRKENLLSLACQHQFCRSCWEQHCSVLVKDGVGVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 RVQPNPSKHVPTSHPPHHCAVCMQFVRKENLLSLACQHQFCRSCWEQHCSVLVKDGVGVG 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 VSCMAQDCPLRTPEDFVFPLLPNEELREKYRRYLFRDYVESHYQLQLCPGADCPMVIRVQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 VSCMAQDCPLRTPEDFVFPLLPNEELREKYRRYLFRDYVESHYQLQLCPGADCPMVIRVQ 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 EPRARRVQCNRCNEVFCFKCRQMYHAPTDCATIRKWLTKCADDSETANYISAHTKDCPKC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 EPRARRVQCNRCNEVFCFKCRQMYHAPTDCATIRKWLTKCADDSETANYISAHTKDCPKC 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 NICIEKNGGCNHMQCSKCKHDFCWMCLGDWKTHGSEYYECSRYKENPDIVNQSQQAQARE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 NICIEKNGGCNHMQCSKCKHDFCWMCLGDWKTHGSEYYECSRYKENPDIVNQSQQAQARE 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE3 ALKKYLFYFERWENHNKSLQLEAQTYQRIHEKIQERVMNNLGTWIDWQYLQNAAKLLAKC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 ALKKYLFYFERWENHNKSLQLEAQTYQRIHEKIQERVMNNLGTWIDWQYLQNAAKLLAKC 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE3 RYTLQYTYPYAYYMESGPRKKLFEYQQAQLEAEIENLSWKVERADSYDRGDLENQMHIAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 RYTLQYTYPYAYYMESGPRKKLFEYQQAQLEAEIENLSWKVERADSYDRGDLENQMHIAE 430 440 450 460 470 480 490 pF1KE3 QRRRTLLKDFHDT ::::::::::::: NP_006 QRRRTLLKDFHDT 490 >>NP_001304262 (OMIM: 605615) E3 ubiquitin-protein ligas (493 aa) initn: 3509 init1: 3509 opt: 3509 Z-score: 2836.0 bits: 534.2 E(85289): 3.2e-151 Smith-Waterman score: 3509; 100.0% identity (100.0% similar) in 493 aa overlap (1-493:1-493) 10 20 30 40 50 60 pF1KE3 MSVDMNSQGSDSNEEDYDPNCEEEEEEEEDDPGDIEDYYVGVASDVEQQGADAFDPEEYQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MSVDMNSQGSDSNEEDYDPNCEEEEEEEEDDPGDIEDYYVGVASDVEQQGADAFDPEEYQ 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 FTCLTYKESEGALNEHMTSLASVLKVSHSVAKLILVNFHWQVSEILDRYKSNSAQLLVEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 FTCLTYKESEGALNEHMTSLASVLKVSHSVAKLILVNFHWQVSEILDRYKSNSAQLLVEA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 RVQPNPSKHVPTSHPPHHCAVCMQFVRKENLLSLACQHQFCRSCWEQHCSVLVKDGVGVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 RVQPNPSKHVPTSHPPHHCAVCMQFVRKENLLSLACQHQFCRSCWEQHCSVLVKDGVGVG 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 VSCMAQDCPLRTPEDFVFPLLPNEELREKYRRYLFRDYVESHYQLQLCPGADCPMVIRVQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 VSCMAQDCPLRTPEDFVFPLLPNEELREKYRRYLFRDYVESHYQLQLCPGADCPMVIRVQ 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 EPRARRVQCNRCNEVFCFKCRQMYHAPTDCATIRKWLTKCADDSETANYISAHTKDCPKC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 EPRARRVQCNRCNEVFCFKCRQMYHAPTDCATIRKWLTKCADDSETANYISAHTKDCPKC 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 NICIEKNGGCNHMQCSKCKHDFCWMCLGDWKTHGSEYYECSRYKENPDIVNQSQQAQARE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 NICIEKNGGCNHMQCSKCKHDFCWMCLGDWKTHGSEYYECSRYKENPDIVNQSQQAQARE 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE3 ALKKYLFYFERWENHNKSLQLEAQTYQRIHEKIQERVMNNLGTWIDWQYLQNAAKLLAKC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 ALKKYLFYFERWENHNKSLQLEAQTYQRIHEKIQERVMNNLGTWIDWQYLQNAAKLLAKC 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE3 RYTLQYTYPYAYYMESGPRKKLFEYQQAQLEAEIENLSWKVERADSYDRGDLENQMHIAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 RYTLQYTYPYAYYMESGPRKKLFEYQQAQLEAEIENLSWKVERADSYDRGDLENQMHIAE 430 440 450 460 470 480 490 pF1KE3 QRRRTLLKDFHDT ::::::::::::: NP_001 QRRRTLLKDFHDT 490 >>XP_016861021 (OMIM: 605615) PREDICTED: E3 ubiquitin-pr (493 aa) initn: 3509 init1: 3509 opt: 3509 Z-score: 2836.0 bits: 534.2 E(85289): 3.2e-151 Smith-Waterman score: 3509; 100.0% identity (100.0% similar) in 493 aa overlap (1-493:1-493) 10 20 30 40 50 60 pF1KE3 MSVDMNSQGSDSNEEDYDPNCEEEEEEEEDDPGDIEDYYVGVASDVEQQGADAFDPEEYQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MSVDMNSQGSDSNEEDYDPNCEEEEEEEEDDPGDIEDYYVGVASDVEQQGADAFDPEEYQ 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 FTCLTYKESEGALNEHMTSLASVLKVSHSVAKLILVNFHWQVSEILDRYKSNSAQLLVEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 FTCLTYKESEGALNEHMTSLASVLKVSHSVAKLILVNFHWQVSEILDRYKSNSAQLLVEA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 RVQPNPSKHVPTSHPPHHCAVCMQFVRKENLLSLACQHQFCRSCWEQHCSVLVKDGVGVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 RVQPNPSKHVPTSHPPHHCAVCMQFVRKENLLSLACQHQFCRSCWEQHCSVLVKDGVGVG 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 VSCMAQDCPLRTPEDFVFPLLPNEELREKYRRYLFRDYVESHYQLQLCPGADCPMVIRVQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 VSCMAQDCPLRTPEDFVFPLLPNEELREKYRRYLFRDYVESHYQLQLCPGADCPMVIRVQ 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 EPRARRVQCNRCNEVFCFKCRQMYHAPTDCATIRKWLTKCADDSETANYISAHTKDCPKC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 EPRARRVQCNRCNEVFCFKCRQMYHAPTDCATIRKWLTKCADDSETANYISAHTKDCPKC 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 NICIEKNGGCNHMQCSKCKHDFCWMCLGDWKTHGSEYYECSRYKENPDIVNQSQQAQARE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 NICIEKNGGCNHMQCSKCKHDFCWMCLGDWKTHGSEYYECSRYKENPDIVNQSQQAQARE 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE3 ALKKYLFYFERWENHNKSLQLEAQTYQRIHEKIQERVMNNLGTWIDWQYLQNAAKLLAKC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 ALKKYLFYFERWENHNKSLQLEAQTYQRIHEKIQERVMNNLGTWIDWQYLQNAAKLLAKC 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE3 RYTLQYTYPYAYYMESGPRKKLFEYQQAQLEAEIENLSWKVERADSYDRGDLENQMHIAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 RYTLQYTYPYAYYMESGPRKKLFEYQQAQLEAEIENLSWKVERADSYDRGDLENQMHIAE 430 440 450 460 470 480 490 pF1KE3 QRRRTLLKDFHDT ::::::::::::: XP_016 QRRRTLLKDFHDT 490 >>XP_016861027 (OMIM: 605615) PREDICTED: E3 ubiquitin-pr (421 aa) initn: 2938 init1: 2938 opt: 2941 Z-score: 2380.0 bits: 449.6 E(85289): 8e-126 Smith-Waterman score: 2941; 97.6% identity (98.8% similar) in 420 aa overlap (77-493:2-421) 50 60 70 80 90 100 pF1KE3 EQQGADAFDPEEYQFTCLTYKESEGALNEHMTSLASVLK---VSHSVAKLILVNFHWQVS .:... .: :::::::::::::::::: XP_016 MLTAISCILPMALVSHSVAKLILVNFHWQVS 10 20 30 110 120 130 140 150 160 pF1KE3 EILDRYKSNSAQLLVEARVQPNPSKHVPTSHPPHHCAVCMQFVRKENLLSLACQHQFCRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 EILDRYKSNSAQLLVEARVQPNPSKHVPTSHPPHHCAVCMQFVRKENLLSLACQHQFCRS 40 50 60 70 80 90 170 180 190 200 210 220 pF1KE3 CWEQHCSVLVKDGVGVGVSCMAQDCPLRTPEDFVFPLLPNEELREKYRRYLFRDYVESHY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 CWEQHCSVLVKDGVGVGVSCMAQDCPLRTPEDFVFPLLPNEELREKYRRYLFRDYVESHY 100 110 120 130 140 150 230 240 250 260 270 280 pF1KE3 QLQLCPGADCPMVIRVQEPRARRVQCNRCNEVFCFKCRQMYHAPTDCATIRKWLTKCADD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 QLQLCPGADCPMVIRVQEPRARRVQCNRCNEVFCFKCRQMYHAPTDCATIRKWLTKCADD 160 170 180 190 200 210 290 300 310 320 330 340 pF1KE3 SETANYISAHTKDCPKCNICIEKNGGCNHMQCSKCKHDFCWMCLGDWKTHGSEYYECSRY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 SETANYISAHTKDCPKCNICIEKNGGCNHMQCSKCKHDFCWMCLGDWKTHGSEYYECSRY 220 230 240 250 260 270 350 360 370 380 390 400 pF1KE3 KENPDIVNQSQQAQAREALKKYLFYFERWENHNKSLQLEAQTYQRIHEKIQERVMNNLGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 KENPDIVNQSQQAQAREALKKYLFYFERWENHNKSLQLEAQTYQRIHEKIQERVMNNLGT 280 290 300 310 320 330 410 420 430 440 450 460 pF1KE3 WIDWQYLQNAAKLLAKCRYTLQYTYPYAYYMESGPRKKLFEYQQAQLEAEIENLSWKVER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 WIDWQYLQNAAKLLAKCRYTLQYTYPYAYYMESGPRKKLFEYQQAQLEAEIENLSWKVER 340 350 360 370 380 390 470 480 490 pF1KE3 ADSYDRGDLENQMHIAEQRRRTLLKDFHDT :::::::::::::::::::::::::::::: XP_016 ADSYDRGDLENQMHIAEQRRRTLLKDFHDT 400 410 420 >>XP_016861026 (OMIM: 605615) PREDICTED: E3 ubiquitin-pr (421 aa) initn: 2938 init1: 2938 opt: 2941 Z-score: 2380.0 bits: 449.6 E(85289): 8e-126 Smith-Waterman score: 2941; 97.6% identity (98.8% similar) in 420 aa overlap (77-493:2-421) 50 60 70 80 90 100 pF1KE3 EQQGADAFDPEEYQFTCLTYKESEGALNEHMTSLASVLK---VSHSVAKLILVNFHWQVS .:... .: :::::::::::::::::: XP_016 MLTAISCILPMALVSHSVAKLILVNFHWQVS 10 20 30 110 120 130 140 150 160 pF1KE3 EILDRYKSNSAQLLVEARVQPNPSKHVPTSHPPHHCAVCMQFVRKENLLSLACQHQFCRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 EILDRYKSNSAQLLVEARVQPNPSKHVPTSHPPHHCAVCMQFVRKENLLSLACQHQFCRS 40 50 60 70 80 90 170 180 190 200 210 220 pF1KE3 CWEQHCSVLVKDGVGVGVSCMAQDCPLRTPEDFVFPLLPNEELREKYRRYLFRDYVESHY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 CWEQHCSVLVKDGVGVGVSCMAQDCPLRTPEDFVFPLLPNEELREKYRRYLFRDYVESHY 100 110 120 130 140 150 230 240 250 260 270 280 pF1KE3 QLQLCPGADCPMVIRVQEPRARRVQCNRCNEVFCFKCRQMYHAPTDCATIRKWLTKCADD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 QLQLCPGADCPMVIRVQEPRARRVQCNRCNEVFCFKCRQMYHAPTDCATIRKWLTKCADD 160 170 180 190 200 210 290 300 310 320 330 340 pF1KE3 SETANYISAHTKDCPKCNICIEKNGGCNHMQCSKCKHDFCWMCLGDWKTHGSEYYECSRY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 SETANYISAHTKDCPKCNICIEKNGGCNHMQCSKCKHDFCWMCLGDWKTHGSEYYECSRY 220 230 240 250 260 270 350 360 370 380 390 400 pF1KE3 KENPDIVNQSQQAQAREALKKYLFYFERWENHNKSLQLEAQTYQRIHEKIQERVMNNLGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 KENPDIVNQSQQAQAREALKKYLFYFERWENHNKSLQLEAQTYQRIHEKIQERVMNNLGT 280 290 300 310 320 330 410 420 430 440 450 460 pF1KE3 WIDWQYLQNAAKLLAKCRYTLQYTYPYAYYMESGPRKKLFEYQQAQLEAEIENLSWKVER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 WIDWQYLQNAAKLLAKCRYTLQYTYPYAYYMESGPRKKLFEYQQAQLEAEIENLSWKVER 340 350 360 370 380 390 470 480 490 pF1KE3 ADSYDRGDLENQMHIAEQRRRTLLKDFHDT :::::::::::::::::::::::::::::: XP_016 ADSYDRGDLENQMHIAEQRRRTLLKDFHDT 400 410 420 >>XP_011531577 (OMIM: 605615) PREDICTED: E3 ubiquitin-pr (421 aa) initn: 2938 init1: 2938 opt: 2941 Z-score: 2380.0 bits: 449.6 E(85289): 8e-126 Smith-Waterman score: 2941; 97.6% identity (98.8% similar) in 420 aa overlap (77-493:2-421) 50 60 70 80 90 100 pF1KE3 EQQGADAFDPEEYQFTCLTYKESEGALNEHMTSLASVLK---VSHSVAKLILVNFHWQVS .:... .: :::::::::::::::::: XP_011 MLTAISCILPMALVSHSVAKLILVNFHWQVS 10 20 30 110 120 130 140 150 160 pF1KE3 EILDRYKSNSAQLLVEARVQPNPSKHVPTSHPPHHCAVCMQFVRKENLLSLACQHQFCRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 EILDRYKSNSAQLLVEARVQPNPSKHVPTSHPPHHCAVCMQFVRKENLLSLACQHQFCRS 40 50 60 70 80 90 170 180 190 200 210 220 pF1KE3 CWEQHCSVLVKDGVGVGVSCMAQDCPLRTPEDFVFPLLPNEELREKYRRYLFRDYVESHY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 CWEQHCSVLVKDGVGVGVSCMAQDCPLRTPEDFVFPLLPNEELREKYRRYLFRDYVESHY 100 110 120 130 140 150 230 240 250 260 270 280 pF1KE3 QLQLCPGADCPMVIRVQEPRARRVQCNRCNEVFCFKCRQMYHAPTDCATIRKWLTKCADD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 QLQLCPGADCPMVIRVQEPRARRVQCNRCNEVFCFKCRQMYHAPTDCATIRKWLTKCADD 160 170 180 190 200 210 290 300 310 320 330 340 pF1KE3 SETANYISAHTKDCPKCNICIEKNGGCNHMQCSKCKHDFCWMCLGDWKTHGSEYYECSRY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 SETANYISAHTKDCPKCNICIEKNGGCNHMQCSKCKHDFCWMCLGDWKTHGSEYYECSRY 220 230 240 250 260 270 350 360 370 380 390 400 pF1KE3 KENPDIVNQSQQAQAREALKKYLFYFERWENHNKSLQLEAQTYQRIHEKIQERVMNNLGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 KENPDIVNQSQQAQAREALKKYLFYFERWENHNKSLQLEAQTYQRIHEKIQERVMNNLGT 280 290 300 310 320 330 410 420 430 440 450 460 pF1KE3 WIDWQYLQNAAKLLAKCRYTLQYTYPYAYYMESGPRKKLFEYQQAQLEAEIENLSWKVER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 WIDWQYLQNAAKLLAKCRYTLQYTYPYAYYMESGPRKKLFEYQQAQLEAEIENLSWKVER 340 350 360 370 380 390 470 480 490 pF1KE3 ADSYDRGDLENQMHIAEQRRRTLLKDFHDT :::::::::::::::::::::::::::::: XP_011 ADSYDRGDLENQMHIAEQRRRTLLKDFHDT 400 410 420 >>XP_016861028 (OMIM: 605615) PREDICTED: E3 ubiquitin-pr (421 aa) initn: 2938 init1: 2938 opt: 2941 Z-score: 2380.0 bits: 449.6 E(85289): 8e-126 Smith-Waterman score: 2941; 97.6% identity (98.8% similar) in 420 aa overlap (77-493:2-421) 50 60 70 80 90 100 pF1KE3 EQQGADAFDPEEYQFTCLTYKESEGALNEHMTSLASVLK---VSHSVAKLILVNFHWQVS .:... .: :::::::::::::::::: XP_016 MLTAISCILPMALVSHSVAKLILVNFHWQVS 10 20 30 110 120 130 140 150 160 pF1KE3 EILDRYKSNSAQLLVEARVQPNPSKHVPTSHPPHHCAVCMQFVRKENLLSLACQHQFCRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 EILDRYKSNSAQLLVEARVQPNPSKHVPTSHPPHHCAVCMQFVRKENLLSLACQHQFCRS 40 50 60 70 80 90 170 180 190 200 210 220 pF1KE3 CWEQHCSVLVKDGVGVGVSCMAQDCPLRTPEDFVFPLLPNEELREKYRRYLFRDYVESHY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 CWEQHCSVLVKDGVGVGVSCMAQDCPLRTPEDFVFPLLPNEELREKYRRYLFRDYVESHY 100 110 120 130 140 150 230 240 250 260 270 280 pF1KE3 QLQLCPGADCPMVIRVQEPRARRVQCNRCNEVFCFKCRQMYHAPTDCATIRKWLTKCADD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 QLQLCPGADCPMVIRVQEPRARRVQCNRCNEVFCFKCRQMYHAPTDCATIRKWLTKCADD 160 170 180 190 200 210 290 300 310 320 330 340 pF1KE3 SETANYISAHTKDCPKCNICIEKNGGCNHMQCSKCKHDFCWMCLGDWKTHGSEYYECSRY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 SETANYISAHTKDCPKCNICIEKNGGCNHMQCSKCKHDFCWMCLGDWKTHGSEYYECSRY 220 230 240 250 260 270 350 360 370 380 390 400 pF1KE3 KENPDIVNQSQQAQAREALKKYLFYFERWENHNKSLQLEAQTYQRIHEKIQERVMNNLGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 KENPDIVNQSQQAQAREALKKYLFYFERWENHNKSLQLEAQTYQRIHEKIQERVMNNLGT 280 290 300 310 320 330 410 420 430 440 450 460 pF1KE3 WIDWQYLQNAAKLLAKCRYTLQYTYPYAYYMESGPRKKLFEYQQAQLEAEIENLSWKVER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 WIDWQYLQNAAKLLAKCRYTLQYTYPYAYYMESGPRKKLFEYQQAQLEAEIENLSWKVER 340 350 360 370 380 390 470 480 490 pF1KE3 ADSYDRGDLENQMHIAEQRRRTLLKDFHDT :::::::::::::::::::::::::::::: XP_016 ADSYDRGDLENQMHIAEQRRRTLLKDFHDT 400 410 420 >>XP_016861025 (OMIM: 605615) PREDICTED: E3 ubiquitin-pr (421 aa) initn: 2938 init1: 2938 opt: 2941 Z-score: 2380.0 bits: 449.6 E(85289): 8e-126 Smith-Waterman score: 2941; 97.6% identity (98.8% similar) in 420 aa overlap (77-493:2-421) 50 60 70 80 90 100 pF1KE3 EQQGADAFDPEEYQFTCLTYKESEGALNEHMTSLASVLK---VSHSVAKLILVNFHWQVS .:... .: :::::::::::::::::: XP_016 MLTAISCILPMALVSHSVAKLILVNFHWQVS 10 20 30 110 120 130 140 150 160 pF1KE3 EILDRYKSNSAQLLVEARVQPNPSKHVPTSHPPHHCAVCMQFVRKENLLSLACQHQFCRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 EILDRYKSNSAQLLVEARVQPNPSKHVPTSHPPHHCAVCMQFVRKENLLSLACQHQFCRS 40 50 60 70 80 90 170 180 190 200 210 220 pF1KE3 CWEQHCSVLVKDGVGVGVSCMAQDCPLRTPEDFVFPLLPNEELREKYRRYLFRDYVESHY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 CWEQHCSVLVKDGVGVGVSCMAQDCPLRTPEDFVFPLLPNEELREKYRRYLFRDYVESHY 100 110 120 130 140 150 230 240 250 260 270 280 pF1KE3 QLQLCPGADCPMVIRVQEPRARRVQCNRCNEVFCFKCRQMYHAPTDCATIRKWLTKCADD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 QLQLCPGADCPMVIRVQEPRARRVQCNRCNEVFCFKCRQMYHAPTDCATIRKWLTKCADD 160 170 180 190 200 210 290 300 310 320 330 340 pF1KE3 SETANYISAHTKDCPKCNICIEKNGGCNHMQCSKCKHDFCWMCLGDWKTHGSEYYECSRY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 SETANYISAHTKDCPKCNICIEKNGGCNHMQCSKCKHDFCWMCLGDWKTHGSEYYECSRY 220 230 240 250 260 270 350 360 370 380 390 400 pF1KE3 KENPDIVNQSQQAQAREALKKYLFYFERWENHNKSLQLEAQTYQRIHEKIQERVMNNLGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 KENPDIVNQSQQAQAREALKKYLFYFERWENHNKSLQLEAQTYQRIHEKIQERVMNNLGT 280 290 300 310 320 330 410 420 430 440 450 460 pF1KE3 WIDWQYLQNAAKLLAKCRYTLQYTYPYAYYMESGPRKKLFEYQQAQLEAEIENLSWKVER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 WIDWQYLQNAAKLLAKCRYTLQYTYPYAYYMESGPRKKLFEYQQAQLEAEIENLSWKVER 340 350 360 370 380 390 470 480 490 pF1KE3 ADSYDRGDLENQMHIAEQRRRTLLKDFHDT :::::::::::::::::::::::::::::: XP_016 ADSYDRGDLENQMHIAEQRRRTLLKDFHDT 400 410 420 >>XP_016861029 (OMIM: 605615) PREDICTED: E3 ubiquitin-pr (409 aa) initn: 2938 init1: 2938 opt: 2938 Z-score: 2377.7 bits: 449.2 E(85289): 1.1e-125 Smith-Waterman score: 2938; 100.0% identity (100.0% similar) in 408 aa overlap (86-493:2-409) 60 70 80 90 100 110 pF1KE3 PEEYQFTCLTYKESEGALNEHMTSLASVLKVSHSVAKLILVNFHWQVSEILDRYKSNSAQ :::::::::::::::::::::::::::::: XP_016 MVSHSVAKLILVNFHWQVSEILDRYKSNSAQ 10 20 30 120 130 140 150 160 170 pF1KE3 LLVEARVQPNPSKHVPTSHPPHHCAVCMQFVRKENLLSLACQHQFCRSCWEQHCSVLVKD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 LLVEARVQPNPSKHVPTSHPPHHCAVCMQFVRKENLLSLACQHQFCRSCWEQHCSVLVKD 40 50 60 70 80 90 180 190 200 210 220 230 pF1KE3 GVGVGVSCMAQDCPLRTPEDFVFPLLPNEELREKYRRYLFRDYVESHYQLQLCPGADCPM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 GVGVGVSCMAQDCPLRTPEDFVFPLLPNEELREKYRRYLFRDYVESHYQLQLCPGADCPM 100 110 120 130 140 150 240 250 260 270 280 290 pF1KE3 VIRVQEPRARRVQCNRCNEVFCFKCRQMYHAPTDCATIRKWLTKCADDSETANYISAHTK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 VIRVQEPRARRVQCNRCNEVFCFKCRQMYHAPTDCATIRKWLTKCADDSETANYISAHTK 160 170 180 190 200 210 300 310 320 330 340 350 pF1KE3 DCPKCNICIEKNGGCNHMQCSKCKHDFCWMCLGDWKTHGSEYYECSRYKENPDIVNQSQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 DCPKCNICIEKNGGCNHMQCSKCKHDFCWMCLGDWKTHGSEYYECSRYKENPDIVNQSQQ 220 230 240 250 260 270 360 370 380 390 400 410 pF1KE3 AQAREALKKYLFYFERWENHNKSLQLEAQTYQRIHEKIQERVMNNLGTWIDWQYLQNAAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 AQAREALKKYLFYFERWENHNKSLQLEAQTYQRIHEKIQERVMNNLGTWIDWQYLQNAAK 280 290 300 310 320 330 420 430 440 450 460 470 pF1KE3 LLAKCRYTLQYTYPYAYYMESGPRKKLFEYQQAQLEAEIENLSWKVERADSYDRGDLENQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 LLAKCRYTLQYTYPYAYYMESGPRKKLFEYQQAQLEAEIENLSWKVERADSYDRGDLENQ 340 350 360 370 380 390 480 490 pF1KE3 MHIAEQRRRTLLKDFHDT :::::::::::::::::: XP_016 MHIAEQRRRTLLKDFHDT 400 493 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 23:36:07 2016 done: Sun Nov 6 23:36:08 2016 Total Scan time: 8.380 Total Display time: 0.060 Function used was FASTA [36.3.4 Apr, 2011]