FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1507, 295 aa 1>>>pF1KE1507 295 - 295 aa - 295 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.3646+/-0.000405; mu= 15.0635+/- 0.025 mean_var=66.1368+/-13.658, 0's: 0 Z-trim(110.4): 37 B-trim: 838 in 1/52 Lambda= 0.157708 statistics sampled from 18736 (18770) to 18736 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.595), E-opt: 0.2 (0.22), width: 16 Scan time: 6.730 The best scores are: opt bits E(85289) NP_954854 (OMIM: 601578) cyclin-G1 [Homo sapiens] ( 295) 1931 448.4 7.7e-126 NP_004051 (OMIM: 601578) cyclin-G1 [Homo sapiens] ( 295) 1931 448.4 7.7e-126 NP_004345 (OMIM: 603203) cyclin-G2 [Homo sapiens] ( 344) 972 230.2 4.2e-60 XP_011530700 (OMIM: 603203) PREDICTED: cyclin-G2 i ( 344) 972 230.2 4.2e-60 XP_011530701 (OMIM: 603203) PREDICTED: cyclin-G2 i ( 344) 972 230.2 4.2e-60 NP_444284 (OMIM: 168461,193300,254500) G1/S-specif ( 295) 217 58.4 1.9e-08 NP_001228 (OMIM: 123835) cyclin-A2 [Homo sapiens] ( 432) 211 57.1 6.8e-08 NP_001750 (OMIM: 123833,615938) G1/S-specific cycl ( 289) 190 52.3 1.3e-06 NP_001751 (OMIM: 123834) G1/S-specific cyclin-D3 i ( 292) 182 50.5 4.7e-06 NP_001104517 (OMIM: 604036) cyclin-A1 isoform c [H ( 421) 177 49.4 1.4e-05 XP_011533596 (OMIM: 604036) PREDICTED: cyclin-A1 i ( 421) 177 49.4 1.4e-05 XP_011533598 (OMIM: 604036) PREDICTED: cyclin-A1 i ( 421) 177 49.4 1.4e-05 XP_011533597 (OMIM: 604036) PREDICTED: cyclin-A1 i ( 421) 177 49.4 1.4e-05 NP_001104516 (OMIM: 604036) cyclin-A1 isoform c [H ( 421) 177 49.4 1.4e-05 NP_001274356 (OMIM: 123834) G1/S-specific cyclin-D ( 242) 174 48.6 1.4e-05 NP_001104515 (OMIM: 604036) cyclin-A1 isoform b [H ( 464) 177 49.4 1.5e-05 NP_003905 (OMIM: 604036) cyclin-A1 isoform a [Homo ( 465) 177 49.4 1.5e-05 NP_391990 (OMIM: 300456) G2/mitotic-specific cycli ( 291) 165 46.6 6.9e-05 XP_011515668 (OMIM: 603775) PREDICTED: G1/S-specif ( 288) 160 45.5 0.00015 XP_016869448 (OMIM: 603775) PREDICTED: G1/S-specif ( 404) 160 45.5 0.0002 XP_016869446 (OMIM: 603775) PREDICTED: G1/S-specif ( 404) 160 45.5 0.0002 NP_477097 (OMIM: 603775) G1/S-specific cyclin-E2 [ ( 404) 160 45.5 0.0002 XP_016869447 (OMIM: 603775) PREDICTED: G1/S-specif ( 404) 160 45.5 0.0002 NP_004692 (OMIM: 602755) G2/mitotic-specific cycli ( 398) 159 45.3 0.00023 NP_066970 (OMIM: 607752,615872) cyclin-O [Homo sap ( 350) 156 44.6 0.00033 NP_001129489 (OMIM: 123834) G1/S-specific cyclin-D ( 211) 150 43.1 0.00056 XP_011513273 (OMIM: 123834) PREDICTED: G1/S-specif ( 276) 148 42.7 0.00096 >>NP_954854 (OMIM: 601578) cyclin-G1 [Homo sapiens] (295 aa) initn: 1931 init1: 1931 opt: 1931 Z-score: 2380.2 bits: 448.4 E(85289): 7.7e-126 Smith-Waterman score: 1931; 100.0% identity (100.0% similar) in 295 aa overlap (1-295:1-295) 10 20 30 40 50 60 pF1KE1 MIEVLTTTDSQKLLHQLNALLEQESRCQPKVCGLRLIESAHDNGLRMTARLRDFEVKDLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_954 MIEVLTTTDSQKLLHQLNALLEQESRCQPKVCGLRLIESAHDNGLRMTARLRDFEVKDLL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 SLTQFFGFDTETFSLAVNLLDRFLSKMKVQPKHLGCVGLSCFYLAVKSIEEERNVPLATD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_954 SLTQFFGFDTETFSLAVNLLDRFLSKMKVQPKHLGCVGLSCFYLAVKSIEEERNVPLATD 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 LIRISQYRFTVSDLMRMEKIVLEKVCWKVKATTAFQFLQLYYSLLQENLPLERRNSINFE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_954 LIRISQYRFTVSDLMRMEKIVLEKVCWKVKATTAFQFLQLYYSLLQENLPLERRNSINFE 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 RLEAQLKACHCRIIFSKAKPSVLALSIIALEIQAQKCVELTEGIECLQKHSKINGRDLTF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_954 RLEAQLKACHCRIIFSKAKPSVLALSIIALEIQAQKCVELTEGIECLQKHSKINGRDLTF 190 200 210 220 230 240 250 260 270 280 290 pF1KE1 WQELVSKCLTEYSSNKCSKPNVQKLKWIVSGRTARQLKHSYYRITHLPTIPEMVP ::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_954 WQELVSKCLTEYSSNKCSKPNVQKLKWIVSGRTARQLKHSYYRITHLPTIPEMVP 250 260 270 280 290 >>NP_004051 (OMIM: 601578) cyclin-G1 [Homo sapiens] (295 aa) initn: 1931 init1: 1931 opt: 1931 Z-score: 2380.2 bits: 448.4 E(85289): 7.7e-126 Smith-Waterman score: 1931; 100.0% identity (100.0% similar) in 295 aa overlap (1-295:1-295) 10 20 30 40 50 60 pF1KE1 MIEVLTTTDSQKLLHQLNALLEQESRCQPKVCGLRLIESAHDNGLRMTARLRDFEVKDLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_004 MIEVLTTTDSQKLLHQLNALLEQESRCQPKVCGLRLIESAHDNGLRMTARLRDFEVKDLL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 SLTQFFGFDTETFSLAVNLLDRFLSKMKVQPKHLGCVGLSCFYLAVKSIEEERNVPLATD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_004 SLTQFFGFDTETFSLAVNLLDRFLSKMKVQPKHLGCVGLSCFYLAVKSIEEERNVPLATD 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 LIRISQYRFTVSDLMRMEKIVLEKVCWKVKATTAFQFLQLYYSLLQENLPLERRNSINFE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_004 LIRISQYRFTVSDLMRMEKIVLEKVCWKVKATTAFQFLQLYYSLLQENLPLERRNSINFE 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 RLEAQLKACHCRIIFSKAKPSVLALSIIALEIQAQKCVELTEGIECLQKHSKINGRDLTF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_004 RLEAQLKACHCRIIFSKAKPSVLALSIIALEIQAQKCVELTEGIECLQKHSKINGRDLTF 190 200 210 220 230 240 250 260 270 280 290 pF1KE1 WQELVSKCLTEYSSNKCSKPNVQKLKWIVSGRTARQLKHSYYRITHLPTIPEMVP ::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_004 WQELVSKCLTEYSSNKCSKPNVQKLKWIVSGRTARQLKHSYYRITHLPTIPEMVP 250 260 270 280 290 >>NP_004345 (OMIM: 603203) cyclin-G2 [Homo sapiens] (344 aa) initn: 972 init1: 498 opt: 972 Z-score: 1200.0 bits: 230.2 E(85289): 4.2e-60 Smith-Waterman score: 972; 52.8% identity (79.3% similar) in 290 aa overlap (3-292:7-295) 10 20 30 40 50 pF1KE1 MIEVLTTTDSQKLLHQLNALLEQESRCQPKVCGLRLIESAHDNGLRMTARLRDFEV : :. .. .:: ::. :::: : ::. :: :::.. .: . ::. .: NP_004 MKDLGAEHLAGHEGVQLLGLLNVYLEQEERFQPREKGLSLIEATPENDNTLCPGLRNAKV 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE1 KDLLSLTQFFGFDTETFSLAVNLLDRFLSKMKVQPKHLGCVGLSCFYLAVKSIEEERNVP .:: ::..::: :::: ::::.:::::. :::.::::.:.:. : ::.. .::. :.: NP_004 EDLRSLANFFGSCTETFVLAVNILDRFLALMKVKPKHLSCIGVCSFLLAARIVEEDCNIP 70 80 90 100 110 120 120 130 140 150 160 170 pF1KE1 LATDLIRISQYRFTVSDLMRMEKIVLEKVCWKVKATTAFQFLQLYYSLLQENLPLERRNS . :.::::: . :.::. :::::. ::. ....::::..::.::.... . ::.. NP_004 STHDVIRISQCKCTASDIKRMEKIISEKLHYELEATTALNFLHLYHTIILCHTS-ERKEI 130 140 150 160 170 180 190 200 210 220 230 pF1KE1 INFERLEAQLKACHCRIIFSKAKPSVLALSIIALEIQAQKCVELTEGIECLQKHSKINGR .....::::::::.::.:::::::::::: .. ::... : ::: : . ..:::::: NP_004 LSLDKLEAQLKACNCRLIFSKAKPSVLALCLLNLEVETLKSVELLEILLLVKKHSKINDT 180 190 200 210 220 230 240 250 260 270 280 290 pF1KE1 DLTFWQELVSKCLTEYSSNKCSKPNVQKLKWIVSGRTARQLKHSYYRITHLPTIPEMVP .. .:.:::::::.:::: .: ::...:: :::: :::..:..::: . .:::::: NP_004 EFFYWRELVSKCLAEYSSPECCKPDLKKLVWIVSRRTAQNLHNSYYSVPELPTIPEGGCF 240 250 260 270 280 290 NP_004 DESESEDSCEDMSCGEESLSSSPPSDQECTFFFNFKVAQTLCFPS 300 310 320 330 340 >>XP_011530700 (OMIM: 603203) PREDICTED: cyclin-G2 isofo (344 aa) initn: 972 init1: 498 opt: 972 Z-score: 1200.0 bits: 230.2 E(85289): 4.2e-60 Smith-Waterman score: 972; 52.8% identity (79.3% similar) in 290 aa overlap (3-292:7-295) 10 20 30 40 50 pF1KE1 MIEVLTTTDSQKLLHQLNALLEQESRCQPKVCGLRLIESAHDNGLRMTARLRDFEV : :. .. .:: ::. :::: : ::. :: :::.. .: . ::. .: XP_011 MKDLGAEHLAGHEGVQLLGLLNVYLEQEERFQPREKGLSLIEATPENDNTLCPGLRNAKV 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE1 KDLLSLTQFFGFDTETFSLAVNLLDRFLSKMKVQPKHLGCVGLSCFYLAVKSIEEERNVP .:: ::..::: :::: ::::.:::::. :::.::::.:.:. : ::.. .::. :.: XP_011 EDLRSLANFFGSCTETFVLAVNILDRFLALMKVKPKHLSCIGVCSFLLAARIVEEDCNIP 70 80 90 100 110 120 120 130 140 150 160 170 pF1KE1 LATDLIRISQYRFTVSDLMRMEKIVLEKVCWKVKATTAFQFLQLYYSLLQENLPLERRNS . :.::::: . :.::. :::::. ::. ....::::..::.::.... . ::.. XP_011 STHDVIRISQCKCTASDIKRMEKIISEKLHYELEATTALNFLHLYHTIILCHTS-ERKEI 130 140 150 160 170 180 190 200 210 220 230 pF1KE1 INFERLEAQLKACHCRIIFSKAKPSVLALSIIALEIQAQKCVELTEGIECLQKHSKINGR .....::::::::.::.:::::::::::: .. ::... : ::: : . ..:::::: XP_011 LSLDKLEAQLKACNCRLIFSKAKPSVLALCLLNLEVETLKSVELLEILLLVKKHSKINDT 180 190 200 210 220 230 240 250 260 270 280 290 pF1KE1 DLTFWQELVSKCLTEYSSNKCSKPNVQKLKWIVSGRTARQLKHSYYRITHLPTIPEMVP .. .:.:::::::.:::: .: ::...:: :::: :::..:..::: . .:::::: XP_011 EFFYWRELVSKCLAEYSSPECCKPDLKKLVWIVSRRTAQNLHNSYYSVPELPTIPEGGCF 240 250 260 270 280 290 XP_011 DESESEDSCEDMSCGEESLSSSPPSDQECTFFFNFKVAQTLCFPS 300 310 320 330 340 >>XP_011530701 (OMIM: 603203) PREDICTED: cyclin-G2 isofo (344 aa) initn: 972 init1: 498 opt: 972 Z-score: 1200.0 bits: 230.2 E(85289): 4.2e-60 Smith-Waterman score: 972; 52.8% identity (79.3% similar) in 290 aa overlap (3-292:7-295) 10 20 30 40 50 pF1KE1 MIEVLTTTDSQKLLHQLNALLEQESRCQPKVCGLRLIESAHDNGLRMTARLRDFEV : :. .. .:: ::. :::: : ::. :: :::.. .: . ::. .: XP_011 MKDLGAEHLAGHEGVQLLGLLNVYLEQEERFQPREKGLSLIEATPENDNTLCPGLRNAKV 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE1 KDLLSLTQFFGFDTETFSLAVNLLDRFLSKMKVQPKHLGCVGLSCFYLAVKSIEEERNVP .:: ::..::: :::: ::::.:::::. :::.::::.:.:. : ::.. .::. :.: XP_011 EDLRSLANFFGSCTETFVLAVNILDRFLALMKVKPKHLSCIGVCSFLLAARIVEEDCNIP 70 80 90 100 110 120 120 130 140 150 160 170 pF1KE1 LATDLIRISQYRFTVSDLMRMEKIVLEKVCWKVKATTAFQFLQLYYSLLQENLPLERRNS . :.::::: . :.::. :::::. ::. ....::::..::.::.... . ::.. XP_011 STHDVIRISQCKCTASDIKRMEKIISEKLHYELEATTALNFLHLYHTIILCHTS-ERKEI 130 140 150 160 170 180 190 200 210 220 230 pF1KE1 INFERLEAQLKACHCRIIFSKAKPSVLALSIIALEIQAQKCVELTEGIECLQKHSKINGR .....::::::::.::.:::::::::::: .. ::... : ::: : . ..:::::: XP_011 LSLDKLEAQLKACNCRLIFSKAKPSVLALCLLNLEVETLKSVELLEILLLVKKHSKINDT 180 190 200 210 220 230 240 250 260 270 280 290 pF1KE1 DLTFWQELVSKCLTEYSSNKCSKPNVQKLKWIVSGRTARQLKHSYYRITHLPTIPEMVP .. .:.:::::::.:::: .: ::...:: :::: :::..:..::: . .:::::: XP_011 EFFYWRELVSKCLAEYSSPECCKPDLKKLVWIVSRRTAQNLHNSYYSVPELPTIPEGGCF 240 250 260 270 280 290 XP_011 DESESEDSCEDMSCGEESLSSSPPSDQECTFFFNFKVAQTLCFPS 300 310 320 330 340 >>NP_444284 (OMIM: 168461,193300,254500) G1/S-specific c (295 aa) initn: 111 init1: 69 opt: 217 Z-score: 272.6 bits: 58.4 E(85289): 1.9e-08 Smith-Waterman score: 217; 24.9% identity (57.2% similar) in 201 aa overlap (17-213:28-213) 10 20 30 40 pF1KE1 MIEVLTTTDSQKLLHQLNALLEQESRCQPKVCGLRLIESAHDNGLRMTA : :.:. : : :.: .. ... .. NP_444 MEHQLLCCEVETIRRAYPDANLLNDRVLRAMLKAEETCAPSVSYFKCVQK------EVLP 10 20 30 40 50 50 60 70 80 90 100 pF1KE1 RLRDFEVKDLLSLTQFFGFDTETFSLAVNLLDRFLSKMKVQPKHLGCVGLSCFYLAVKSI .: . . .: . . . :.: ::.: :::::: :. ..: .: .:...: : NP_444 SMRKIVATWMLEVCEEQKCEEEVFPLAMNYLDRFLSLEPVKKSRLQLLGATCMFVASKMK 60 70 80 90 100 110 110 120 130 140 150 160 pF1KE1 EEERNVPLATDLIRI-SQYRFTVSDLMRMEKIVLEKVCWKVKATTAFQFLQLYYSLL--- : ..::... . : .. . .:..:: ....:. :.. : : .:.. . : . NP_444 E---TIPLTAEKLCIYTDNSIRPEELLQMELLLVNKLKWNLAAMTPHDFIEHFLSKMPEA 120 130 140 150 160 170 170 180 190 200 210 220 pF1KE1 QENLPLERRNSINFERLEAQLKACHCRIIFSKAKPSVLALSIIALEIQAQKCVELTEGIE .:: . :... .: : : . : . ::..: . .. .: NP_444 EENKQIIRKHAQTFVAL------CATDVKFISNPPSMVAAGSVVAAVQGLNLRSPNNFLS 180 190 200 210 220 230 240 250 260 270 280 pF1KE1 CLQKHSKINGRDLTFWQELVSKCLTEYSSNKCSKPNVQKLKWIVSGRTARQLKHSYYRIT NP_444 YYRLTRFLSRVIKCDPDCLRACQEQIEALLESSLRQAQQNMDPKAAEEEEEEEEEVDLAC 230 240 250 260 270 280 >>NP_001228 (OMIM: 123835) cyclin-A2 [Homo sapiens] (432 aa) initn: 183 init1: 104 opt: 211 Z-score: 262.7 bits: 57.1 E(85289): 6.8e-08 Smith-Waterman score: 213; 31.7% identity (61.5% similar) in 161 aa overlap (2-162:170-319) 10 20 30 pF1KE1 MIEVLTTTDSQKLLHQLNALLEQESRCQPKV . : . : .. .: : :.: .:.::: NP_001 PLVPLDYPMDGSFESPHTMDMSIVLEDEKPVSVNEVPDYHEDIHTY--LREMEVKCKPKV 140 150 160 170 180 190 40 50 60 70 80 90 pF1KE1 CGLRLIESAHDNGLRMTARLRDFEVKDLLSLTQFFGFDTETFSLAVNLLDRFLSKMKVQP : ... : .: .: . : :. . . . ...::. :::: .:::::.:.: NP_001 -GY--MKKQPD----ITNSMRAILVDWLVEVGEEYKLQNETLHLAVNYIDRFLSSMSVLR 200 210 220 230 240 250 100 110 120 130 140 150 pF1KE1 KHLGCVGLSCFYLAVKSIEEERNVPLATDLIRISQYRFTVSDLMRMEKIVLEKVCWKVKA .: :: . . :: : :: : ..... :.. .: ....:::..::. . . . : NP_001 GKLQLVGTAAMLLASKF--EEIYPPEVAEFVYITDDTYTKKQVLRMEHLVLKVLTFDLAA 260 270 280 290 300 160 170 180 190 200 210 pF1KE1 TTAFQFLQLYYSLLQENLPLERRNSINFERLEAQLKACHCRIIFSKAKPSVLALSIIALE :. ::: :. NP_001 PTVNQFLTQYFLHQQPANCKVESLAMFLGELSLIDADPYLKYLPSVIAGAAFHLALYTVT 310 320 330 340 350 360 >>NP_001750 (OMIM: 123833,615938) G1/S-specific cyclin-D (289 aa) initn: 113 init1: 94 opt: 190 Z-score: 239.5 bits: 52.3 E(85289): 1.3e-06 Smith-Waterman score: 190; 25.4% identity (57.3% similar) in 213 aa overlap (17-226:27-225) 10 20 30 40 50 pF1KE1 MIEVLTTTDSQKLLHQLNALLEQESRCQPKVCGLRLIESAHDNGLRMTAR :. :: : : :. .. .. .: . NP_001 MELLCHEVDPVRRAVRDRNLLRDDRVLQNLLTIEERYLPQCSYFKCVQ--KD----IQPY 10 20 30 40 50 60 70 80 90 100 110 pF1KE1 LRDFEVKDLLSLTQFFGFDTETFSLAVNLLDRFLSKMKVQPKHLGCVGLSCFYLAVKSIE .: . . .: . . . :.: ::.: :::::. . . .:: .: :..:: : : NP_001 MRRMVATWMLEVCEEQKCEEEVFPLAMNYLDRFLAGVPTPKSHLQLLGAVCMFLASKLKE 60 70 80 90 100 110 120 130 140 150 160 pF1KE1 EERNVPLATDLIRI-SQYRFTVSDLMRMEKIVLEKVCWKVKATTAFQFLQLYYSLLQENL . ::... . : .. . ..:.. : .:: :. :.. :.: .:.. .:.. : NP_001 ---TSPLTAEKLCIYTDNSIKPQELLEWELVVLGKLKWNLAAVTPHDFIE---HILRK-L 120 130 140 150 160 170 180 190 200 210 220 pF1KE1 PLERRNSINFERLEAQ--LKACHCRIIFSKAKPSVLALSIIALEIQAQKCVELTEGIECL : ..:..... : .:: . : . :. ::..: . .. : . . : . .. : NP_001 P-QQREKLSLIRKHAQTFIALCATDFKFAMYPPSMIATGSVGAAICGLQQDEEVSSLTCD 170 180 190 200 210 220 230 240 250 260 270 280 pF1KE1 QKHSKINGRDLTFWQELVSKCLTEYSSNKCSKPNVQKLKWIVSGRTARQLKHSYYRITHL NP_001 ALTELLAKITNTDVDCLKACQEQIEAVLLNSLQQYRQDQRDGSKSEDELDQASTPTDVRD 230 240 250 260 270 280 >>NP_001751 (OMIM: 123834) G1/S-specific cyclin-D3 isofo (292 aa) initn: 98 init1: 80 opt: 182 Z-score: 229.6 bits: 50.5 E(85289): 4.7e-06 Smith-Waterman score: 182; 24.3% identity (53.0% similar) in 251 aa overlap (17-260:28-265) 10 20 30 40 pF1KE1 MIEVLTTTDSQKLLHQLNALLEQESRCQPKVCGLRLIESAHDNGLRMTA :..::. : : :.. .. .. .. NP_001 MELLCCEGTRHAPRAGPDPRLLGDQRVLQSLLRLEERYVPRASYFQCVQR------EIKP 10 20 30 40 50 50 60 70 80 90 100 pF1KE1 RLRDFEVKDLLSLTQFFGFDTETFSLAVNLLDRFLSKMKVQPKHLGCVGLSCFYLAVKSI ..: . . .: . . . :.: ::.: :::.:: . .. .: .: :. :: : NP_001 HMRKMLAYWMLEVCEEQRCEEEVFPLAMNYLDRYLSCVPTRKAQLQLLGAVCMLLASKLR 60 70 80 90 100 110 110 120 130 140 150 160 pF1KE1 EEERNVPLATDLIRI-SQYRFTVSDLMRMEKIVLEKVCWKVKATTAFQFLQLYYSLLQEN : ..::. . . : ... . .: : .:: :. : . :. : .:: . : . . NP_001 E---TTPLTIEKLCIYTDHAVSPRQLRDWEVLVLGKLKWDLAAVIAHDFLA--FILHRLS 120 130 140 150 160 170 180 190 200 210 220 pF1KE1 LPLERRNSINFERLEAQLKACHCRIIFSKAKPSVLALSIIALEIQAQKCVELTEGIECLQ :: .:. .. .. .. : : :. ::..: . :. .:. .. : : . NP_001 LPRDRQALVK-KHAQTFLALCATDYTFAMYPPSMIATGSIGAAVQGLGACSMS-GDELTE 170 180 190 200 210 220 230 240 250 260 270 280 pF1KE1 KHSKINGRDLTFW---QELVSKCLTEY---SSNKCSKPNVQKLKWIVSGRTARQLKHSYY . :.: .. :: . : : .:. :.: NP_001 LLAGITGTEVDCLRACQEQIEAALRESLREASQTSSSPAPKAPRGSSSQGPSQTSTPTDV 230 240 250 260 270 280 290 pF1KE1 RITHLPTIPEMVP NP_001 TAIHL 290 >>NP_001104517 (OMIM: 604036) cyclin-A1 isoform c [Homo (421 aa) initn: 191 init1: 103 opt: 177 Z-score: 221.1 bits: 49.4 E(85289): 1.4e-05 Smith-Waterman score: 184; 27.9% identity (58.2% similar) in 208 aa overlap (3-210:160-350) 10 20 30 pF1KE1 MIEVLTTTDSQKLLHQLNALLEQESRCQPKVC .:...:. . ..: : : : : .::. NP_001 HFLLDFNTVSPMLVDSSLLSQSEDISSLGTDVINVTEYAEEIYQY--LREAEIRHRPKA- 130 140 150 160 170 180 40 50 60 70 80 90 pF1KE1 GLRLIESAHDNGLRMTARLRDFEVKDLLSLTQFFGFDTETFSLAVNLLDRFLSKMKVQPK . ... : .: .: . : :. . . . . .::. ::::.:::::: :.: NP_001 --HYMKKQPD----ITEGMRTILVDWLVEVGEEYKLRAETLYLAVNFLDRFLSCMSVLRG 190 200 210 220 230 240 100 110 120 130 140 150 pF1KE1 HLGCVGLSCFYLAVKSIEEERNVPLATDLIRISQYRFTVSDLMRMEKIVLEKVCWKVKAT .: :: . . :: : :: : . ... :.. .: .:..::...:. . . . . NP_001 KLQLVGTAAMLLASK--YEEIYPPEVDEFVYITDDTYTKRQLLKMEHLLLKVLAFDLTVP 250 260 270 280 290 160 170 180 190 200 210 pF1KE1 TAFQFLQLYYSLLQENLPLERRNSINFERLEAQLKACHCRIIFSKAKPSVLALSIIALEI :. ::: : : .... .. .: .. . :.: : : ::..: . . : NP_001 TTNQFLLQY--LRRQGVCVRTENLAKYVAELSLLEADP----FLKYLPSLIAAAAFCLAN 300 310 320 330 340 350 220 230 240 250 260 270 pF1KE1 QAQKCVELTEGIECLQKHSKINGRDLTFWQELVSKCLTEYSSNKCSKPNVQKLKWIVSGR NP_001 YTVNKHFWPETLAAFTGYSLSEIVPCLSELHKAYLDIPHRPQQAIREKYKASKYLCVSLM 360 370 380 390 400 410 295 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 23:38:17 2016 done: Sun Nov 6 23:38:18 2016 Total Scan time: 6.730 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]