FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE4328, 334 aa 1>>>pF1KE4328 334 - 334 aa - 334 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.9672+/-0.000431; mu= 17.7017+/- 0.027 mean_var=60.2894+/-11.977, 0's: 0 Z-trim(110.1): 31 B-trim: 45 in 1/48 Lambda= 0.165179 statistics sampled from 18382 (18387) to 18382 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.591), E-opt: 0.2 (0.216), width: 16 Scan time: 7.270 The best scores are: opt bits E(85289) NP_001625 (OMIM: 180980) S-adenosylmethionine deca ( 334) 2244 543.5 2.4e-154 NP_001274143 (OMIM: 180980) S-adenosylmethionine d ( 305) 1810 440.0 3e-123 NP_001274144 (OMIM: 180980) S-adenosylmethionine d ( 265) 1789 435.0 8.6e-122 NP_001274145 (OMIM: 180980) S-adenosylmethionine d ( 214) 1177 289.1 5.8e-78 >>NP_001625 (OMIM: 180980) S-adenosylmethionine decarbox (334 aa) initn: 2244 init1: 2244 opt: 2244 Z-score: 2892.0 bits: 543.5 E(85289): 2.4e-154 Smith-Waterman score: 2244; 100.0% identity (100.0% similar) in 334 aa overlap (1-334:1-334) 10 20 30 40 50 60 pF1KE4 MEAAHFFEGTEKLLEVWFSRQQPDANQGSGDLRTIPRSEWDILLKDVQCSIISVTKTDKQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MEAAHFFEGTEKLLEVWFSRQQPDANQGSGDLRTIPRSEWDILLKDVQCSIISVTKTDKQ 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 EAYVLSESSMFVSKRRFILKTCGTTLLLKALVPLLKLARDYSGFDSIQSFFYSRKNFMKP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 EAYVLSESSMFVSKRRFILKTCGTTLLLKALVPLLKLARDYSGFDSIQSFFYSRKNFMKP 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 SHQGYPHRNFQEEIEFLNAIFPNGAAYCMGRMNSDCWYLYTLDFPESRVISQPDQTLEIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 SHQGYPHRNFQEEIEFLNAIFPNGAAYCMGRMNSDCWYLYTLDFPESRVISQPDQTLEIL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 MSELDPAVMDQFYMKDGVTAKDVTRESGIRDLIPGSVIDATMFNPCGYSMNGMKSDGTYW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MSELDPAVMDQFYMKDGVTAKDVTRESGIRDLIPGSVIDATMFNPCGYSMNGMKSDGTYW 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 TIHITPEPEFSYVSFETNLSQTSYDDLIRKVVEVFKPGKFVTTLFVNQSSKCRTVLASPQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 TIHITPEPEFSYVSFETNLSQTSYDDLIRKVVEVFKPGKFVTTLFVNQSSKCRTVLASPQ 250 260 270 280 290 300 310 320 330 pF1KE4 KIEGFKRLDCQSAMFNDYNFVFTSFAKKQQQQQS :::::::::::::::::::::::::::::::::: NP_001 KIEGFKRLDCQSAMFNDYNFVFTSFAKKQQQQQS 310 320 330 >>NP_001274143 (OMIM: 180980) S-adenosylmethionine decar (305 aa) initn: 2044 init1: 1810 opt: 1810 Z-score: 2333.7 bits: 440.0 E(85289): 3e-123 Smith-Waterman score: 1990; 91.3% identity (91.3% similar) in 334 aa overlap (1-334:1-305) 10 20 30 40 50 60 pF1KE4 MEAAHFFEGTEKLLEVWFSRQQPDANQGSGDLRTIPRSEWDILLKDVQCSIISVTKTDKQ :::::::::::::::::::::::::::::::::::: NP_001 MEAAHFFEGTEKLLEVWFSRQQPDANQGSGDLRTIP------------------------ 10 20 30 70 80 90 100 110 120 pF1KE4 EAYVLSESSMFVSKRRFILKTCGTTLLLKALVPLLKLARDYSGFDSIQSFFYSRKNFMKP ::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 -----SESSMFVSKRRFILKTCGTTLLLKALVPLLKLARDYSGFDSIQSFFYSRKNFMKP 40 50 60 70 80 90 130 140 150 160 170 180 pF1KE4 SHQGYPHRNFQEEIEFLNAIFPNGAAYCMGRMNSDCWYLYTLDFPESRVISQPDQTLEIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 SHQGYPHRNFQEEIEFLNAIFPNGAAYCMGRMNSDCWYLYTLDFPESRVISQPDQTLEIL 100 110 120 130 140 150 190 200 210 220 230 240 pF1KE4 MSELDPAVMDQFYMKDGVTAKDVTRESGIRDLIPGSVIDATMFNPCGYSMNGMKSDGTYW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MSELDPAVMDQFYMKDGVTAKDVTRESGIRDLIPGSVIDATMFNPCGYSMNGMKSDGTYW 160 170 180 190 200 210 250 260 270 280 290 300 pF1KE4 TIHITPEPEFSYVSFETNLSQTSYDDLIRKVVEVFKPGKFVTTLFVNQSSKCRTVLASPQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 TIHITPEPEFSYVSFETNLSQTSYDDLIRKVVEVFKPGKFVTTLFVNQSSKCRTVLASPQ 220 230 240 250 260 270 310 320 330 pF1KE4 KIEGFKRLDCQSAMFNDYNFVFTSFAKKQQQQQS :::::::::::::::::::::::::::::::::: NP_001 KIEGFKRLDCQSAMFNDYNFVFTSFAKKQQQQQS 280 290 300 >>NP_001274144 (OMIM: 180980) S-adenosylmethionine decar (265 aa) initn: 1789 init1: 1789 opt: 1789 Z-score: 2307.5 bits: 435.0 E(85289): 8.6e-122 Smith-Waterman score: 1789; 100.0% identity (100.0% similar) in 265 aa overlap (70-334:1-265) 40 50 60 70 80 90 pF1KE4 WDILLKDVQCSIISVTKTDKQEAYVLSESSMFVSKRRFILKTCGTTLLLKALVPLLKLAR :::::::::::::::::::::::::::::: NP_001 MFVSKRRFILKTCGTTLLLKALVPLLKLAR 10 20 30 100 110 120 130 140 150 pF1KE4 DYSGFDSIQSFFYSRKNFMKPSHQGYPHRNFQEEIEFLNAIFPNGAAYCMGRMNSDCWYL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 DYSGFDSIQSFFYSRKNFMKPSHQGYPHRNFQEEIEFLNAIFPNGAAYCMGRMNSDCWYL 40 50 60 70 80 90 160 170 180 190 200 210 pF1KE4 YTLDFPESRVISQPDQTLEILMSELDPAVMDQFYMKDGVTAKDVTRESGIRDLIPGSVID :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 YTLDFPESRVISQPDQTLEILMSELDPAVMDQFYMKDGVTAKDVTRESGIRDLIPGSVID 100 110 120 130 140 150 220 230 240 250 260 270 pF1KE4 ATMFNPCGYSMNGMKSDGTYWTIHITPEPEFSYVSFETNLSQTSYDDLIRKVVEVFKPGK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 ATMFNPCGYSMNGMKSDGTYWTIHITPEPEFSYVSFETNLSQTSYDDLIRKVVEVFKPGK 160 170 180 190 200 210 280 290 300 310 320 330 pF1KE4 FVTTLFVNQSSKCRTVLASPQKIEGFKRLDCQSAMFNDYNFVFTSFAKKQQQQQS ::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 FVTTLFVNQSSKCRTVLASPQKIEGFKRLDCQSAMFNDYNFVFTSFAKKQQQQQS 220 230 240 250 260 >>NP_001274145 (OMIM: 180980) S-adenosylmethionine decar (214 aa) initn: 1418 init1: 1177 opt: 1177 Z-score: 1520.7 bits: 289.1 E(85289): 5.8e-78 Smith-Waterman score: 1182; 64.1% identity (64.1% similar) in 334 aa overlap (1-334:1-214) 10 20 30 40 50 60 pF1KE4 MEAAHFFEGTEKLLEVWFSRQQPDANQGSGDLRTIPRSEWDILLKDVQCSIISVTKTDKQ ::::::::::::::::::::::::::::::::::::: NP_001 MEAAHFFEGTEKLLEVWFSRQQPDANQGSGDLRTIPR----------------------- 10 20 30 70 80 90 100 110 120 pF1KE4 EAYVLSESSMFVSKRRFILKTCGTTLLLKALVPLLKLARDYSGFDSIQSFFYSRKNFMKP NP_001 ------------------------------------------------------------ 130 140 150 160 170 180 pF1KE4 SHQGYPHRNFQEEIEFLNAIFPNGAAYCMGRMNSDCWYLYTLDFPESRVISQPDQTLEIL ::::::::::::::::::::::: NP_001 -------------------------------------YLYTLDFPESRVISQPDQTLEIL 40 50 60 190 200 210 220 230 240 pF1KE4 MSELDPAVMDQFYMKDGVTAKDVTRESGIRDLIPGSVIDATMFNPCGYSMNGMKSDGTYW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MSELDPAVMDQFYMKDGVTAKDVTRESGIRDLIPGSVIDATMFNPCGYSMNGMKSDGTYW 70 80 90 100 110 120 250 260 270 280 290 300 pF1KE4 TIHITPEPEFSYVSFETNLSQTSYDDLIRKVVEVFKPGKFVTTLFVNQSSKCRTVLASPQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 TIHITPEPEFSYVSFETNLSQTSYDDLIRKVVEVFKPGKFVTTLFVNQSSKCRTVLASPQ 130 140 150 160 170 180 310 320 330 pF1KE4 KIEGFKRLDCQSAMFNDYNFVFTSFAKKQQQQQS :::::::::::::::::::::::::::::::::: NP_001 KIEGFKRLDCQSAMFNDYNFVFTSFAKKQQQQQS 190 200 210 334 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 02:16:59 2016 done: Sun Nov 6 02:17:00 2016 Total Scan time: 7.270 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]