FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE4309, 318 aa 1>>>pF1KE4309 318 - 318 aa - 318 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.9298+/-0.000394; mu= 17.4363+/- 0.025 mean_var=54.9445+/-11.328, 0's: 0 Z-trim(110.1): 24 B-trim: 72 in 1/49 Lambda= 0.173026 statistics sampled from 18418 (18437) to 18418 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.586), E-opt: 0.2 (0.216), width: 16 Scan time: 7.160 The best scores are: opt bits E(85289) NP_000223 (OMIM: 600900,604286) beta-sarcoglycan [ ( 318) 2076 526.4 2.9e-149 XP_005266562 (OMIM: 253700,608896) PREDICTED: gamm ( 291) 210 60.6 4.4e-09 XP_006719924 (OMIM: 253700,608896) PREDICTED: gamm ( 309) 210 60.6 4.7e-09 NP_000222 (OMIM: 253700,608896) gamma-sarcoglycan ( 291) 208 60.1 6.3e-09 NP_001121681 (OMIM: 601287,601411,606685) delta-sa ( 289) 198 57.6 3.5e-08 XP_011532923 (OMIM: 601287,601411,606685) PREDICTE ( 289) 198 57.6 3.5e-08 XP_016865213 (OMIM: 601287,601411,606685) PREDICTE ( 290) 198 57.6 3.5e-08 XP_005266023 (OMIM: 601287,601411,606685) PREDICTE ( 290) 198 57.6 3.5e-08 NP_000328 (OMIM: 601287,601411,606685) delta-sarco ( 290) 198 57.6 3.5e-08 XP_016865212 (OMIM: 601287,601411,606685) PREDICTE ( 290) 198 57.6 3.5e-08 >>NP_000223 (OMIM: 600900,604286) beta-sarcoglycan [Homo (318 aa) initn: 2076 init1: 2076 opt: 2076 Z-score: 2800.8 bits: 526.4 E(85289): 2.9e-149 Smith-Waterman score: 2076; 100.0% identity (100.0% similar) in 318 aa overlap (1-318:1-318) 10 20 30 40 50 60 pF1KE4 MAAAAAAAAEQQSSNGPVKKSMREKAVERRSVNKEHNSNFKAGYIPIDEDRLHKTGLRGR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_000 MAAAAAAAAEQQSSNGPVKKSMREKAVERRSVNKEHNSNFKAGYIPIDEDRLHKTGLRGR 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 KGNLAICVIILLFILAVINLIITLVIWAVIRIGPNGCDSMEFHESGLLRFKQVSDMGVIH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_000 KGNLAICVIILLFILAVINLIITLVIWAVIRIGPNGCDSMEFHESGLLRFKQVSDMGVIH 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 PLYKSTVGGRRNENLVITGNNQPIVFQQGTTKLSVENNKTSITSDIGMQFFDPRTQNILF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_000 PLYKSTVGGRRNENLVITGNNQPIVFQQGTTKLSVENNKTSITSDIGMQFFDPRTQNILF 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 STDYETHEFHLPSGVKSLNVQKASTERITSNATSDLNIKVDGRAIVRGNEGVFIMGKTIE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_000 STDYETHEFHLPSGVKSLNVQKASTERITSNATSDLNIKVDGRAIVRGNEGVFIMGKTIE 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 FHMGGNMELKAENSIILNGSVMVSTTRLPSSSSGDQLGSGDWVRYKLCMCADGTLFKVQV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_000 FHMGGNMELKAENSIILNGSVMVSTTRLPSSSSGDQLGSGDWVRYKLCMCADGTLFKVQV 250 260 270 280 290 300 310 pF1KE4 TSQNMGCQISDNPCGNTH :::::::::::::::::: NP_000 TSQNMGCQISDNPCGNTH 310 >>XP_005266562 (OMIM: 253700,608896) PREDICTED: gamma-sa (291 aa) initn: 64 init1: 45 opt: 210 Z-score: 284.0 bits: 60.6 E(85289): 4.4e-09 Smith-Waterman score: 210; 23.6% identity (58.5% similar) in 284 aa overlap (48-314:19-290) 20 30 40 50 60 70 pF1KE4 VKKSMREKAVERRSVNKEHNSNFKAGYIPIDEDRLHKTGLRG-RKGNLAICVIILLFILA ... ..: :. : :: : . :..::.:: XP_005 MVREQYTTATEGICIERPENQYVYKIGIYGWRKRCLYLFVLLLLIIL- 10 20 30 40 80 90 100 110 120 130 pF1KE4 VINLIITLVIWAVIRIGPNGCDSMEFHESGLLRFKQVSDMGVIHPLYKSTVGGRRNENLV :.:: .:. : :. ..: : . ..:: :.. :.. . ::: . . .: . .:. XP_005 VVNLALTIWILKVMWFSPAGMGHLCVTKDGL-RLEGESEF--LFPLYAKEIHSRVDSSLL 50 60 70 80 90 100 140 150 160 170 180 pF1KE4 ITGNNQPIV------------FQQGTTKLSVENNKTSITSDIGMQFFDPRTQNILFSTDY . .... : .. : . :.:.. .:.:. : .: .... .:: XP_005 LQSTQNVTVNARNSEGEVTGRLKVGPKMVEVQNQQFQINSNDGKPLFTVDEKEVVVGTD- 110 120 130 140 150 160 190 200 210 220 230 240 pF1KE4 ETHEFHLPSGVKSLNVQKASTERITSNATSDLNIKVDGRAI-VRGNEGVFIMGKTIEFHM . : : .: ... : . .. .:: .. :.. . . .:: :.... ... XP_005 -KLRVTGPEG--ALFEHSVETPLVRADPFQDLRLESPTRSLSMDAPRGVHIQAHAGKIEA 170 180 190 200 210 220 250 260 270 280 290 300 pF1KE4 GGNMELKAENSIILNGSVMVS--TTRLPSSSSGDQLGSGD-WVRYKLCMCADGTLFKVQV ..:.. ..: .: .... :. ::. .: ::. :..:.: :: :. ..: XP_005 LSQMDILFHSS---DGMLVLDAETVCLPKLVQGTWGPSGSSQSLYEICVCPDGKLY-LSV 230 240 250 260 270 310 pF1KE4 TSQNMGCQISDNPCGNTH .. . :: .. : XP_005 AGVSTTCQEHNHICL 280 290 >>XP_006719924 (OMIM: 253700,608896) PREDICTED: gamma-sa (309 aa) initn: 64 init1: 45 opt: 210 Z-score: 283.6 bits: 60.6 E(85289): 4.7e-09 Smith-Waterman score: 210; 23.6% identity (58.5% similar) in 284 aa overlap (48-314:37-308) 20 30 40 50 60 70 pF1KE4 VKKSMREKAVERRSVNKEHNSNFKAGYIPIDEDRLHKTGLRG-RKGNLAICVIILLFILA ... ..: :. : :: : . :..::.:: XP_006 AVCAPGLQEVQQMVREQYTTATEGICIERPENQYVYKIGIYGWRKRCLYLFVLLLLIIL- 10 20 30 40 50 60 80 90 100 110 120 130 pF1KE4 VINLIITLVIWAVIRIGPNGCDSMEFHESGLLRFKQVSDMGVIHPLYKSTVGGRRNENLV :.:: .:. : :. ..: : . ..:: :.. :.. . ::: . . .: . .:. XP_006 VVNLALTIWILKVMWFSPAGMGHLCVTKDGL-RLEGESEF--LFPLYAKEIHSRVDSSLL 70 80 90 100 110 120 140 150 160 170 180 pF1KE4 ITGNNQPIV------------FQQGTTKLSVENNKTSITSDIGMQFFDPRTQNILFSTDY . .... : .. : . :.:.. .:.:. : .: .... .:: XP_006 LQSTQNVTVNARNSEGEVTGRLKVGPKMVEVQNQQFQINSNDGKPLFTVDEKEVVVGTD- 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 ETHEFHLPSGVKSLNVQKASTERITSNATSDLNIKVDGRAI-VRGNEGVFIMGKTIEFHM . : : .: ... : . .. .:: .. :.. . . .:: :.... ... XP_006 -KLRVTGPEG--ALFEHSVETPLVRADPFQDLRLESPTRSLSMDAPRGVHIQAHAGKIEA 190 200 210 220 230 250 260 270 280 290 300 pF1KE4 GGNMELKAENSIILNGSVMVS--TTRLPSSSSGDQLGSGD-WVRYKLCMCADGTLFKVQV ..:.. ..: .: .... :. ::. .: ::. :..:.: :: :. ..: XP_006 LSQMDILFHSS---DGMLVLDAETVCLPKLVQGTWGPSGSSQSLYEICVCPDGKLY-LSV 240 250 260 270 280 290 310 pF1KE4 TSQNMGCQISDNPCGNTH .. . :: .. : XP_006 AGVSTTCQEHNHICL 300 >>NP_000222 (OMIM: 253700,608896) gamma-sarcoglycan [Hom (291 aa) initn: 64 init1: 45 opt: 208 Z-score: 281.3 bits: 60.1 E(85289): 6.3e-09 Smith-Waterman score: 208; 23.6% identity (58.5% similar) in 284 aa overlap (48-314:19-290) 20 30 40 50 60 70 pF1KE4 VKKSMREKAVERRSVNKEHNSNFKAGYIPIDEDRLHKTGLRG-RKGNLAICVIILLFILA ... ..: :. : :: : . :..::.:: NP_000 MVREQYTTATEGICIERPENQYVYKIGIYGWRKRCLYLFVLLLLIIL- 10 20 30 40 80 90 100 110 120 130 pF1KE4 VINLIITLVIWAVIRIGPNGCDSMEFHESGLLRFKQVSDMGVIHPLYKSTVGGRRNENLV :.:: .:. : :. ..: : . ..:: :.. :.. . ::: . . .: . .:. NP_000 VVNLALTIWILKVMWFSPAGMGHLCVTKDGL-RLEGESEF--LFPLYAKEIHSRVDSSLL 50 60 70 80 90 100 140 150 160 170 180 pF1KE4 ITGNNQPIV------------FQQGTTKLSVENNKTSITSDIGMQFFDPRTQNILFSTDY . .... : .. : . :.:.. .:.:. : .: .... .:: NP_000 LQSTQNVTVNARNSEGEVTGRLKVGPKMVEVQNQQFQINSNDGKPLFTVDEKEVVVGTD- 110 120 130 140 150 160 190 200 210 220 230 240 pF1KE4 ETHEFHLPSGVKSLNVQKASTERITSNATSDLNIKVDGRAI-VRGNEGVFIMGKTIEFHM . : : .: ... : . .. .:: .. :.. . . .:: :.... ... NP_000 -KLRVTGPEG--ALFEHSVETPLVRADPFQDLRLESPTRSLSMDAPRGVHIQAHAGKIEA 170 180 190 200 210 220 250 260 270 280 290 300 pF1KE4 GGNMELKAENSIILNGSVMVS--TTRLPSSSSGDQLGSGD-WVRYKLCMCADGTLFKVQV ..:.. ..: .: .... :. ::. .: ::. :..:.: :: :. ..: NP_000 LSQMDILFHSS---DGMLVLDAETVCLPKLVQGTWGPSGSSQSLYEICVCPDGKLY-LSV 230 240 250 260 270 310 pF1KE4 TSQNMGCQISDNPCGNTH .. . :: .. : NP_000 AGVSTTCQEHSHICL 280 290 >>NP_001121681 (OMIM: 601287,601411,606685) delta-sarcog (289 aa) initn: 125 init1: 78 opt: 198 Z-score: 267.9 bits: 57.6 E(85289): 3.5e-08 Smith-Waterman score: 199; 21.1% identity (56.4% similar) in 280 aa overlap (51-314:20-288) 30 40 50 60 70 80 pF1KE4 SMREKAVERRSVNKEHNSNFKAGYIPIDEDRLHKTGLRGRKGNLAICVIILLFILAVINL ...:.:. : . ..::.:: ..:: NP_001 MPQEQYTHHRSTMPGSVGPQVYKVGIYGWRKRCLYFFVLLLMILILVNL 10 20 30 40 90 100 110 120 130 pF1KE4 IITLVIWAVIRIGPNGCDSMEFHESGLLRFKQVSDMGVIHPLYKSTVGGR---------- .:. : :. . .: .... :.:: : .: ..::: . . .: NP_001 AMTIWILKVMNFTIDGMGNLRITEKGL---KLEGDSEFLQPLYAKEIQSRPGNALYFKSA 50 60 70 80 90 100 140 150 160 170 180 pF1KE4 RNENLVITGNNQPIVFQQGTTKLSVE--NNKTSITSDIGMQFFDPRTQNILFSTDYETHE :: .. : ... .. : : .:: ..: . . : .:. ..... ... . NP_001 RNVTVNILNDQTKVLTQLITGPKAVEAYGKKFEVKTVSGKLLFSADNNEVVVGAE----R 110 120 130 140 150 160 190 200 210 220 230 240 pF1KE4 FHLPSGVKSLNVQKASTERITSNATSDLNIKVDGRAIV-RGNEGVFIMGKTIEFHMGGNM ... .. .. .. : . .. ..: .. :..: .. .:: : ... ... NP_001 LRVLGAEGTVFPKSIETPNVRADPFKELRLESPTRSLVMEAPKGVEINAEAGNMEATCRT 170 180 190 200 210 220 250 260 270 280 290 300 pF1KE4 ELKAENSIILNGSVMVSTT--RLPSSSSGDQLGSGDWVR-YKLCMCADGTLFKVQVTSQN ::. :.. .: . .... ::: :. .: . ...:.::.: :: :. . . NP_001 ELRLESK---DGEIKLDAAKIRLPRLPHGSYTPTGTRQKVFEICVCANGRLFLSQAGAGS 230 240 250 260 270 310 pF1KE4 MGCQISDNPCGNTH :::. . : NP_001 T-CQINTSVCL 280 >>XP_011532923 (OMIM: 601287,601411,606685) PREDICTED: d (289 aa) initn: 125 init1: 78 opt: 198 Z-score: 267.9 bits: 57.6 E(85289): 3.5e-08 Smith-Waterman score: 199; 21.1% identity (56.4% similar) in 280 aa overlap (51-314:20-288) 30 40 50 60 70 80 pF1KE4 SMREKAVERRSVNKEHNSNFKAGYIPIDEDRLHKTGLRGRKGNLAICVIILLFILAVINL ...:.:. : . ..::.:: ..:: XP_011 MPQEQYTHHRSTMPGSVGPQVYKVGIYGWRKRCLYFFVLLLMILILVNL 10 20 30 40 90 100 110 120 130 pF1KE4 IITLVIWAVIRIGPNGCDSMEFHESGLLRFKQVSDMGVIHPLYKSTVGGR---------- .:. : :. . .: .... :.:: : .: ..::: . . .: XP_011 AMTIWILKVMNFTIDGMGNLRITEKGL---KLEGDSEFLQPLYAKEIQSRPGNALYFKSA 50 60 70 80 90 100 140 150 160 170 180 pF1KE4 RNENLVITGNNQPIVFQQGTTKLSVE--NNKTSITSDIGMQFFDPRTQNILFSTDYETHE :: .. : ... .. : : .:: ..: . . : .:. ..... ... . XP_011 RNVTVNILNDQTKVLTQLITGPKAVEAYGKKFEVKTVSGKLLFSADNNEVVVGAE----R 110 120 130 140 150 160 190 200 210 220 230 240 pF1KE4 FHLPSGVKSLNVQKASTERITSNATSDLNIKVDGRAIV-RGNEGVFIMGKTIEFHMGGNM ... .. .. .. : . .. ..: .. :..: .. .:: : ... ... XP_011 LRVLGAEGTVFPKSIETPNVRADPFKELRLESPTRSLVMEAPKGVEINAEAGNMEATCRT 170 180 190 200 210 220 250 260 270 280 290 300 pF1KE4 ELKAENSIILNGSVMVSTT--RLPSSSSGDQLGSGDWVR-YKLCMCADGTLFKVQVTSQN ::. :.. .: . .... ::: :. .: . ...:.::.: :: :. . . XP_011 ELRLESK---DGEIKLDAAKIRLPRLPHGSYTPTGTRQKVFEICVCANGRLFLSQAGAGS 230 240 250 260 270 310 pF1KE4 MGCQISDNPCGNTH :::. . : XP_011 T-CQINTSVCL 280 >>XP_016865213 (OMIM: 601287,601411,606685) PREDICTED: d (290 aa) initn: 125 init1: 78 opt: 198 Z-score: 267.8 bits: 57.6 E(85289): 3.5e-08 Smith-Waterman score: 199; 21.1% identity (56.4% similar) in 280 aa overlap (51-314:21-289) 30 40 50 60 70 80 pF1KE4 SMREKAVERRSVNKEHNSNFKAGYIPIDEDRLHKTGLRGRKGNLAICVIILLFILAVINL ...:.:. : . ..::.:: ..:: XP_016 MMPQEQYTHHRSTMPGSVGPQVYKVGIYGWRKRCLYFFVLLLMILILVNL 10 20 30 40 50 90 100 110 120 130 pF1KE4 IITLVIWAVIRIGPNGCDSMEFHESGLLRFKQVSDMGVIHPLYKSTVGGR---------- .:. : :. . .: .... :.:: : .: ..::: . . .: XP_016 AMTIWILKVMNFTIDGMGNLRITEKGL---KLEGDSEFLQPLYAKEIQSRPGNALYFKSA 60 70 80 90 100 140 150 160 170 180 pF1KE4 RNENLVITGNNQPIVFQQGTTKLSVE--NNKTSITSDIGMQFFDPRTQNILFSTDYETHE :: .. : ... .. : : .:: ..: . . : .:. ..... ... . XP_016 RNVTVNILNDQTKVLTQLITGPKAVEAYGKKFEVKTVSGKLLFSADNNEVVVGAE----R 110 120 130 140 150 160 190 200 210 220 230 240 pF1KE4 FHLPSGVKSLNVQKASTERITSNATSDLNIKVDGRAIV-RGNEGVFIMGKTIEFHMGGNM ... .. .. .. : . .. ..: .. :..: .. .:: : ... ... XP_016 LRVLGAEGTVFPKSIETPNVRADPFKELRLESPTRSLVMEAPKGVEINAEAGNMEATCRT 170 180 190 200 210 220 250 260 270 280 290 300 pF1KE4 ELKAENSIILNGSVMVSTT--RLPSSSSGDQLGSGDWVR-YKLCMCADGTLFKVQVTSQN ::. :.. .: . .... ::: :. .: . ...:.::.: :: :. . . XP_016 ELRLESK---DGEIKLDAAKIRLPRLPHGSYTPTGTRQKVFEICVCANGRLFLSQAGAGS 230 240 250 260 270 280 310 pF1KE4 MGCQISDNPCGNTH :::. . : XP_016 T-CQINTSVCL 290 >>XP_005266023 (OMIM: 601287,601411,606685) PREDICTED: d (290 aa) initn: 125 init1: 78 opt: 198 Z-score: 267.8 bits: 57.6 E(85289): 3.5e-08 Smith-Waterman score: 199; 21.1% identity (56.4% similar) in 280 aa overlap (51-314:21-289) 30 40 50 60 70 80 pF1KE4 SMREKAVERRSVNKEHNSNFKAGYIPIDEDRLHKTGLRGRKGNLAICVIILLFILAVINL ...:.:. : . ..::.:: ..:: XP_005 MMPQEQYTHHRSTMPGSVGPQVYKVGIYGWRKRCLYFFVLLLMILILVNL 10 20 30 40 50 90 100 110 120 130 pF1KE4 IITLVIWAVIRIGPNGCDSMEFHESGLLRFKQVSDMGVIHPLYKSTVGGR---------- .:. : :. . .: .... :.:: : .: ..::: . . .: XP_005 AMTIWILKVMNFTIDGMGNLRITEKGL---KLEGDSEFLQPLYAKEIQSRPGNALYFKSA 60 70 80 90 100 140 150 160 170 180 pF1KE4 RNENLVITGNNQPIVFQQGTTKLSVE--NNKTSITSDIGMQFFDPRTQNILFSTDYETHE :: .. : ... .. : : .:: ..: . . : .:. ..... ... . XP_005 RNVTVNILNDQTKVLTQLITGPKAVEAYGKKFEVKTVSGKLLFSADNNEVVVGAE----R 110 120 130 140 150 160 190 200 210 220 230 240 pF1KE4 FHLPSGVKSLNVQKASTERITSNATSDLNIKVDGRAIV-RGNEGVFIMGKTIEFHMGGNM ... .. .. .. : . .. ..: .. :..: .. .:: : ... ... XP_005 LRVLGAEGTVFPKSIETPNVRADPFKELRLESPTRSLVMEAPKGVEINAEAGNMEATCRT 170 180 190 200 210 220 250 260 270 280 290 300 pF1KE4 ELKAENSIILNGSVMVSTT--RLPSSSSGDQLGSGDWVR-YKLCMCADGTLFKVQVTSQN ::. :.. .: . .... ::: :. .: . ...:.::.: :: :. . . XP_005 ELRLESK---DGEIKLDAAKIRLPRLPHGSYTPTGTRQKVFEICVCANGRLFLSQAGAGS 230 240 250 260 270 280 310 pF1KE4 MGCQISDNPCGNTH :::. . : XP_005 T-CQINTSVCL 290 >>NP_000328 (OMIM: 601287,601411,606685) delta-sarcoglyc (290 aa) initn: 125 init1: 78 opt: 198 Z-score: 267.8 bits: 57.6 E(85289): 3.5e-08 Smith-Waterman score: 199; 21.1% identity (56.4% similar) in 280 aa overlap (51-314:21-289) 30 40 50 60 70 80 pF1KE4 SMREKAVERRSVNKEHNSNFKAGYIPIDEDRLHKTGLRGRKGNLAICVIILLFILAVINL ...:.:. : . ..::.:: ..:: NP_000 MMPQEQYTHHRSTMPGSVGPQVYKVGIYGWRKRCLYFFVLLLMILILVNL 10 20 30 40 50 90 100 110 120 130 pF1KE4 IITLVIWAVIRIGPNGCDSMEFHESGLLRFKQVSDMGVIHPLYKSTVGGR---------- .:. : :. . .: .... :.:: : .: ..::: . . .: NP_000 AMTIWILKVMNFTIDGMGNLRITEKGL---KLEGDSEFLQPLYAKEIQSRPGNALYFKSA 60 70 80 90 100 140 150 160 170 180 pF1KE4 RNENLVITGNNQPIVFQQGTTKLSVE--NNKTSITSDIGMQFFDPRTQNILFSTDYETHE :: .. : ... .. : : .:: ..: . . : .:. ..... ... . NP_000 RNVTVNILNDQTKVLTQLITGPKAVEAYGKKFEVKTVSGKLLFSADNNEVVVGAE----R 110 120 130 140 150 160 190 200 210 220 230 240 pF1KE4 FHLPSGVKSLNVQKASTERITSNATSDLNIKVDGRAIV-RGNEGVFIMGKTIEFHMGGNM ... .. .. .. : . .. ..: .. :..: .. .:: : ... ... NP_000 LRVLGAEGTVFPKSIETPNVRADPFKELRLESPTRSLVMEAPKGVEINAEAGNMEATCRT 170 180 190 200 210 220 250 260 270 280 290 300 pF1KE4 ELKAENSIILNGSVMVSTT--RLPSSSSGDQLGSGDWVR-YKLCMCADGTLFKVQVTSQN ::. :.. .: . .... ::: :. .: . ...:.::.: :: :. . . NP_000 ELRLESK---DGEIKLDAAKIRLPRLPHGSYTPTGTRQKVFEICVCANGRLFLSQAGAGS 230 240 250 260 270 280 310 pF1KE4 MGCQISDNPCGNTH :::. . : NP_000 T-CQINTSVCL 290 >>XP_016865212 (OMIM: 601287,601411,606685) PREDICTED: d (290 aa) initn: 125 init1: 78 opt: 198 Z-score: 267.8 bits: 57.6 E(85289): 3.5e-08 Smith-Waterman score: 199; 21.1% identity (56.4% similar) in 280 aa overlap (51-314:21-289) 30 40 50 60 70 80 pF1KE4 SMREKAVERRSVNKEHNSNFKAGYIPIDEDRLHKTGLRGRKGNLAICVIILLFILAVINL ...:.:. : . ..::.:: ..:: XP_016 MMPQEQYTHHRSTMPGSVGPQVYKVGIYGWRKRCLYFFVLLLMILILVNL 10 20 30 40 50 90 100 110 120 130 pF1KE4 IITLVIWAVIRIGPNGCDSMEFHESGLLRFKQVSDMGVIHPLYKSTVGGR---------- .:. : :. . .: .... :.:: : .: ..::: . . .: XP_016 AMTIWILKVMNFTIDGMGNLRITEKGL---KLEGDSEFLQPLYAKEIQSRPGNALYFKSA 60 70 80 90 100 140 150 160 170 180 pF1KE4 RNENLVITGNNQPIVFQQGTTKLSVE--NNKTSITSDIGMQFFDPRTQNILFSTDYETHE :: .. : ... .. : : .:: ..: . . : .:. ..... ... . XP_016 RNVTVNILNDQTKVLTQLITGPKAVEAYGKKFEVKTVSGKLLFSADNNEVVVGAE----R 110 120 130 140 150 160 190 200 210 220 230 240 pF1KE4 FHLPSGVKSLNVQKASTERITSNATSDLNIKVDGRAIV-RGNEGVFIMGKTIEFHMGGNM ... .. .. .. : . .. ..: .. :..: .. .:: : ... ... XP_016 LRVLGAEGTVFPKSIETPNVRADPFKELRLESPTRSLVMEAPKGVEINAEAGNMEATCRT 170 180 190 200 210 220 250 260 270 280 290 300 pF1KE4 ELKAENSIILNGSVMVSTT--RLPSSSSGDQLGSGDWVR-YKLCMCADGTLFKVQVTSQN ::. :.. .: . .... ::: :. .: . ...:.::.: :: :. . . XP_016 ELRLESK---DGEIKLDAAKIRLPRLPHGSYTPTGTRQKVFEICVCANGRLFLSQAGAGS 230 240 250 260 270 280 310 pF1KE4 MGCQISDNPCGNTH :::. . : XP_016 T-CQINTSVCL 290 318 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 16:35:55 2016 done: Mon Nov 7 16:35:56 2016 Total Scan time: 7.160 Total Display time: 0.020 Function used was FASTA [36.3.4 Apr, 2011]