FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE4355, 372 aa 1>>>pF1KE4355 372 - 372 aa - 372 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.2720+/-0.000877; mu= 16.4192+/- 0.053 mean_var=58.0853+/-11.592, 0's: 0 Z-trim(104.7): 17 B-trim: 6 in 1/49 Lambda= 0.168283 statistics sampled from 8003 (8013) to 8003 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.626), E-opt: 0.2 (0.246), width: 16 Scan time: 2.680 The best scores are: opt bits E(32554) CCDS902.1 HSD3B2 gene_id:3284|Hs108|chr1 ( 372) 2463 606.3 1.3e-173 CCDS903.1 HSD3B1 gene_id:3283|Hs108|chr1 ( 373) 2337 575.8 2.2e-164 CCDS10698.1 HSD3B7 gene_id:80270|Hs108|chr16 ( 369) 820 207.5 1.6e-53 CCDS42205.1 SDR42E1 gene_id:93517|Hs108|chr16 ( 393) 462 120.5 2.5e-27 CCDS45466.1 HSD3B7 gene_id:80270|Hs108|chr16 ( 196) 396 104.4 8.8e-23 CCDS14717.1 NSDHL gene_id:50814|Hs108|chrX ( 373) 303 81.9 9.8e-16 >>CCDS902.1 HSD3B2 gene_id:3284|Hs108|chr1 (372 aa) initn: 2463 init1: 2463 opt: 2463 Z-score: 3230.1 bits: 606.3 E(32554): 1.3e-173 Smith-Waterman score: 2463; 100.0% identity (100.0% similar) in 372 aa overlap (1-372:1-372) 10 20 30 40 50 60 pF1KE4 MGWSCLVTGAGGLLGQRIVRLLVEEKELKEIRALDKAFRPELREEFSKLQNRTKLTVLEG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS90 MGWSCLVTGAGGLLGQRIVRLLVEEKELKEIRALDKAFRPELREEFSKLQNRTKLTVLEG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 DILDEPFLKRACQDVSVVIHTACIIDVFGVTHRESIMNVNVKGTQLLLEACVQASVPVFI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS90 DILDEPFLKRACQDVSVVIHTACIIDVFGVTHRESIMNVNVKGTQLLLEACVQASVPVFI 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 YTSSIEVAGPNSYKEIIQNGHEEEPLENTWPTPYPYSKKLAEKAVLAANGWNLKNGDTLY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS90 YTSSIEVAGPNSYKEIIQNGHEEEPLENTWPTPYPYSKKLAEKAVLAANGWNLKNGDTLY 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 TCALRPTYIYGEGGPFLSASINEALNNNGILSSVGKFSTVNPVYVGNVAWAHILALRALR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS90 TCALRPTYIYGEGGPFLSASINEALNNNGILSSVGKFSTVNPVYVGNVAWAHILALRALR 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 DPKKAPSVRGQFYYISDDTPHQSYDNLNYILSKEFGLRLDSRWSLPLTLMYWIGFLLEVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS90 DPKKAPSVRGQFYYISDDTPHQSYDNLNYILSKEFGLRLDSRWSLPLTLMYWIGFLLEVV 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE4 SFLLSPIYSYQPPFNRHTVTLSNSVFTFSYKKAQRDLAYKPLYSWEEAKQKTVEWVGSLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS90 SFLLSPIYSYQPPFNRHTVTLSNSVFTFSYKKAQRDLAYKPLYSWEEAKQKTVEWVGSLV 310 320 330 340 350 360 370 pF1KE4 DRHKETLKSKTQ :::::::::::: CCDS90 DRHKETLKSKTQ 370 >>CCDS903.1 HSD3B1 gene_id:3283|Hs108|chr1 (373 aa) initn: 2337 init1: 2337 opt: 2337 Z-score: 3064.8 bits: 575.8 E(32554): 2.2e-164 Smith-Waterman score: 2337; 93.8% identity (98.1% similar) in 371 aa overlap (2-372:3-373) 10 20 30 40 50 pF1KE4 MGWSCLVTGAGGLLGQRIVRLLVEEKELKEIRALDKAFRPELREEFSKLQNRTKLTVLE :::::::::::.:::::.::::.::::::::.::::: ::::::::::::.::::::: CCDS90 MTGWSCLVTGAGGFLGQRIIRLLVKEKELKEIRVLDKAFGPELREEFSKLQNKTKLTVLE 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE4 GDILDEPFLKRACQDVSVVIHTACIIDVFGVTHRESIMNVNVKGTQLLLEACVQASVPVF ::::::::::::::::::.::::::::::::::::::::::::::::::::::::::::: CCDS90 GDILDEPFLKRACQDVSVIIHTACIIDVFGVTHRESIMNVNVKGTQLLLEACVQASVPVF 70 80 90 100 110 120 120 130 140 150 160 170 pF1KE4 IYTSSIEVAGPNSYKEIIQNGHEEEPLENTWPTPYPYSKKLAEKAVLAANGWNLKNGDTL ::::::::::::::::::::::::::::::::.:::.:::::::::::::::::::: :: CCDS90 IYTSSIEVAGPNSYKEIIQNGHEEEPLENTWPAPYPHSKKLAEKAVLAANGWNLKNGGTL 130 140 150 160 170 180 180 190 200 210 220 230 pF1KE4 YTCALRPTYIYGEGGPFLSASINEALNNNGILSSVGKFSTVNPVYVGNVAWAHILALRAL ::::::: ::::::. :::::::::::::::::::::::::::::::::::::::::::: CCDS90 YTCALRPMYIYGEGSRFLSASINEALNNNGILSSVGKFSTVNPVYVGNVAWAHILALRAL 190 200 210 220 230 240 240 250 260 270 280 290 pF1KE4 RDPKKAPSVRGQFYYISDDTPHQSYDNLNYILSKEFGLRLDSRWSLPLTLMYWIGFLLEV .:::::::.::::::::::::::::::::: ::::::::::::::.::.::::::::::. CCDS90 QDPKKAPSIRGQFYYISDDTPHQSYDNLNYTLSKEFGLRLDSRWSFPLSLMYWIGFLLEI 250 260 270 280 290 300 300 310 320 330 340 350 pF1KE4 VSFLLSPIYSYQPPFNRHTVTLSNSVFTFSYKKAQRDLAYKPLYSWEEAKQKTVEWVGSL ::::: :::.:.:::::: ::::::::::::::::::::::::::::::::::::::::: CCDS90 VSFLLRPIYTYRPPFNRHIVTLSNSVFTFSYKKAQRDLAYKPLYSWEEAKQKTVEWVGSL 310 320 330 340 350 360 360 370 pF1KE4 VDRHKETLKSKTQ ::::::::::::: CCDS90 VDRHKETLKSKTQ 370 >>CCDS10698.1 HSD3B7 gene_id:80270|Hs108|chr16 (369 aa) initn: 583 init1: 525 opt: 820 Z-score: 1074.4 bits: 207.5 E(32554): 1.6e-53 Smith-Waterman score: 820; 40.4% identity (69.5% similar) in 354 aa overlap (6-356:13-361) 10 20 30 40 50 pF1KE4 MGWSCLVTGAGGLLGQRIVRLLVE-EKELKEIRALDKAFRPELREEFSKLQNR ::::. :.::...::.:.. : .: :.:..:. . : : ::.. . CCDS10 MADSAQAQKLVYLVTGGCGFLGEHVVRMLLQREPRLGELRVFDQHLGPWL-EELKT--GP 10 20 30 40 50 60 70 80 90 100 110 pF1KE4 TKLTVLEGDILDEPFLKRACQDVSVVIHTACIIDVFGVTHRESIMNVNVKGTQLLLEACV ...:...::. . . : . :::::: ..:::: . ..: .:::.::. ..:::: CCDS10 VRVTAIQGDVTQAHEVAAAVAGAHVVIHTAGLVDVFGRASPKTIHEVNVQGTRNVIEACV 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE4 QASVPVFIYTSSIEVAGPNSYKEIIQNGHEEEPLENTWPTPYPYSKKLAEKAVLAANGWN :... ..::::.::.:::. . . :.:. : : . ::: :: ::: :: ::: . CCDS10 QTGTRFLVYTSSMEVVGPNTKGHPFYRGNEDTPYEAVHRHPYPCSKALAEWLVLEANGRK 120 130 140 150 160 170 180 190 200 210 220 230 pF1KE4 LKNGDTLYTCALRPTYIYGEGGPFLSASINEALNNNGILSSVGKFSTVNP-VYVGNVAWA ...: : ::::::: ::::: .. ..: .: : . :. . :::::::: CCDS10 VRGGLPLVTCALRPTGIYGEGHQIMRDFYRQGLRLGGWLFRAIPASVEHGRVYVGNVAWM 180 190 200 210 220 230 240 250 260 270 280 290 pF1KE4 HILALRALRDPKKAPSVRGQFYYISDDTPHQSYDNLNYILSKEFGLRL-DSRWSLPLTLM :.:: : :. ..: . :: :. : .:..::...:. . :::: .: :: :. CCDS10 HVLAARELE--QRATLMGGQVYFCYDGSPYRSYEDFNMEFLGPCGLRLVGARPLLPYWLL 240 250 260 270 280 290 300 310 320 330 340 350 pF1KE4 YWIGFLLEVVSFLLSPIYSYQPPFNRHTVTLSNSVFTFSYKKAQRDLAYKPLYSWEEAKQ ... : ....:: :. : : .: .:....:..:: : :::: ..:.::.:::... CCDS10 VFLAALNALLQWLLRPLVLYAPLLNPYTLAVANTTFTVSTDKAQRHFGYEPLFSWEDSRT 300 310 320 330 340 350 360 370 pF1KE4 KTVEWVGSLVDRHKETLKSKTQ .:. :: CCDS10 RTILWVQAATGSAQ 360 >>CCDS42205.1 SDR42E1 gene_id:93517|Hs108|chr16 (393 aa) initn: 293 init1: 149 opt: 462 Z-score: 604.3 bits: 120.5 E(32554): 2.5e-27 Smith-Waterman score: 462; 34.8% identity (61.6% similar) in 310 aa overlap (58-355:54-349) 30 40 50 60 70 80 pF1KE4 LKEIRALDKAFRPELREEFSKLQNRTKLTVLEGDILDEPFLKRACQDVSVVIHTACIIDV ..::: ...: ::..:. :.. . CCDS42 LGCALNQNGVHVILFDISSPAQTIPEGIKFIQGDIRHLSDVEKAFQDADVT----CVFHI 30 40 50 60 70 90 100 110 120 130 140 pF1KE4 --FGVTHRES-----IMNVNVKGTQLLLEACVQASVPVFIYTSSIEVAGPNSYKEIIQNG .:.. ::. : .:::.::. .:..: . :: ..:::...: . ..:.:: CCDS42 ASYGMSGREQLNRNLIKEVNVRGTDNILQVCQRRRVPRLVYTSTFNVIFGG---QVIRNG 80 90 100 110 120 130 150 160 170 180 190 pF1KE4 HEEEPLE--NTWPTPYPYSKKLAEKAVLAANGWNLKNGD-TLYTCALRPTYIYGEGGPFL : : . : : .:..::. :: ::. : :: .: ::::::. ::: : CCDS42 DESLPYLPLHLHPDHYSRTKSIAEQKVLEANATPLDRGDGVLRTCALRPAGIYGPGEQRH 140 150 160 170 180 190 200 210 220 230 240 250 pF1KE4 SASINEALNNNGILSSV--GKFSTVNPVYVGNVAWAHILALRALRDPKKAPSVRGQFYYI : ... :... : : :. :.: :.. ::::: .::: :. . :: :.: CCDS42 LPRIVSYIEK-GLFKFVYGDPRSLVEFVHVDNLVQAHILASEALR-ADKGHIASGQPYFI 200 210 220 230 240 250 260 270 280 290 300 310 pF1KE4 SDDTPHQSYDNLNYILSKEFGLRLDSRWSLPLTLMYWIGFLLEVVSFLLSPIYSYQPPFN :: : .... . : . .: . : :::::.: ..:: :.: :.:. .:..:: .. CCDS42 SDGRPVNNFEFFRP-LVEGLGYTFPST-RLPLTLVYCFAFLTEMVHFILGRLYNFQPFLT 260 270 280 290 300 310 320 330 340 350 360 370 pF1KE4 RHTVTLSNSVFTFSYKKAQRDLAYKPLYSWEEAKQKTVEWVGSLVDRHKETLKSKTQ : : .. . :: .::...:.:: . :..::: CCDS42 RTEVYKTGVTHYFSLEKAKKELGYK---AQPFDLQEAVEWFKAHGHGRSSGSRDSECFVW 320 330 340 350 360 CCDS42 DGLLVFLLIIAVLMWLPSSVILSL 370 380 390 >>CCDS45466.1 HSD3B7 gene_id:80270|Hs108|chr16 (196 aa) initn: 370 init1: 312 opt: 396 Z-score: 522.5 bits: 104.4 E(32554): 8.8e-23 Smith-Waterman score: 396; 42.2% identity (72.3% similar) in 166 aa overlap (6-170:13-175) 10 20 30 40 50 pF1KE4 MGWSCLVTGAGGLLGQRIVRLLVE-EKELKEIRALDKAFRPELREEFSKLQNR ::::. :.::...::.:.. : .: :.:..:. . : : ::.. . CCDS45 MADSAQAQKLVYLVTGGCGFLGEHVVRMLLQREPRLGELRVFDQHLGPWL-EELKT--GP 10 20 30 40 50 60 70 80 90 100 110 pF1KE4 TKLTVLEGDILDEPFLKRACQDVSVVIHTACIIDVFGVTHRESIMNVNVKGTQLLLEACV ...:...::. . . : . :::::: ..:::: . ..: .:::.::. ..:::: CCDS45 VRVTAIQGDVTQAHEVAAAVAGAHVVIHTAGLVDVFGRASPKTIHEVNVQGTRNVIEACV 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE4 QASVPVFIYTSSIEVAGPNSYKEIIQNGHEEEPLENTWPTPYPYSKKLAEKAVLAANGWN :... ..::::.::.:::. . . :.:. : : . ::: :: ::: :: ::: CCDS45 QTGTRFLVYTSSMEVVGPNTKGHPFYRGNEDTPYEAVHRHPYPCSKALAEWLVLEANGRK 120 130 140 150 160 170 180 190 200 210 220 230 pF1KE4 LKNGDTLYTCALRPTYIYGEGGPFLSASINEALNNNGILSSVGKFSTVNPVYVGNVAWAH CCDS45 AMLPGCTCWQPGSWSSGQP 180 190 >>CCDS14717.1 NSDHL gene_id:50814|Hs108|chrX (373 aa) initn: 285 init1: 127 opt: 303 Z-score: 396.0 bits: 81.9 E(32554): 9.8e-16 Smith-Waterman score: 407; 29.2% identity (60.1% similar) in 353 aa overlap (5-354:40-364) 10 20 30 pF1KE4 MGWSCLVTGAGGLLGQRIVRLLVEEKELKEIRAL : : :..:.:::..: :. : . :. CCDS14 RDQVARTHLTEDTPKVNADIEKVNQNQAKRCTVIGGSGFLGQHMV-----EQLLARGYAV 10 20 30 40 50 60 40 50 60 70 80 90 pF1KE4 DKAFRPELREEFSKLQNRTKLTVLEGDILDEPFLKRACQDVSVVIHTACIIDVFGVTHRE . .: .... :.. : : : ::. .. : : . :..:.: : . ...: CCDS14 N-VF--DIQQGFDNPQVRFFL----GDLCSRQDLYPALKGVNTVFH--CASPPPSSNNKE 70 80 90 100 110 100 110 120 130 140 150 pF1KE4 SIMNVNVKGTQLLLEACVQASVPVFIYTSSIEVAGPNSYKEI-IQNGHEEEPLENTWPTP .. :: ::. ..:.: .:.: .: ::: : .. . :.:: :. : CCDS14 LFYRVNYIGTKNVIETCKEAGVQKLILTSSASVI----FEGVDIKNGTEDLPYAMKPIDY 120 130 140 150 160 170 160 170 180 190 200 210 pF1KE4 YPYSKKLAEKAVLAANGWNLKNGDTLYTCALRPTYIYGEGGPFLSASINEALNNNGILSS : .: : :.:::.:: . :: . : :.:: :.: : : . :: :. . CCDS14 YTETKILQERAVLGANDPE-KN---FLTTAIRPHGIFGPRDPQLVPILIEAARNGKMKFV 180 190 200 210 220 220 230 240 250 260 270 pF1KE4 VGKFST-VNPVYVGNVAWAHILALRALRDPKKAPSVRGQFYYISDDTPHQSYDNLNYILS .:. .. :. ..: ::. .:::: . : .. .. :. ..:..: : . :. ::. CCDS14 IGNGKNLVDFTFVENVVHGHILAAEQL---SRDSTLGGKAFHITNDEPIPFWTFLSRILT 230 240 250 260 270 280 280 290 300 310 320 330 pF1KE4 KEFGLRLDS-RWSLPLTLMYWIGFLLEVVSFLLSPIYSYQPPFNRHTVTLSNSVFTFSYK :: .. .. .: . :....:: .. ...::. . :: :. :.:... .: . CCDS14 ---GLNYEAPKYHIPYWVAYYLALLLSLLVMVISPVIQLQPTFTPMRVALAGTFHYYSCE 290 300 310 320 330 340 340 350 360 370 pF1KE4 KAQRDLAYKPLYSWEEAKQKTVEWVGSLVDRHKETLKSKTQ .:.. ..:.:: . ..: ..::. CCDS14 RAKKAMGYQPLVTMDDAMERTVQSFRHLRRVK 350 360 370 372 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 02:06:30 2016 done: Sun Nov 6 02:06:30 2016 Total Scan time: 2.680 Total Display time: 0.010 Function used was FASTA [36.3.4 Apr, 2011]