FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6713, 721 aa 1>>>pF1KE6713 721 - 721 aa - 721 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.7376+/-0.00082; mu= 15.0121+/- 0.050 mean_var=132.8889+/-26.571, 0's: 0 Z-trim(113.2): 11 B-trim: 318 in 1/52 Lambda= 0.111258 statistics sampled from 13838 (13847) to 13838 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.747), E-opt: 0.2 (0.425), width: 16 Scan time: 3.520 The best scores are: opt bits E(32554) CCDS31473.1 LARGE2 gene_id:120071|Hs108|chr11 ( 721) 5008 815.4 0 CCDS76399.1 LARGE2 gene_id:120071|Hs108|chr11 ( 690) 4597 749.4 4.2e-216 CCDS13912.1 LARGE1 gene_id:9215|Hs108|chr22 ( 756) 3149 517.0 4.2e-146 >>CCDS31473.1 LARGE2 gene_id:120071|Hs108|chr11 (721 aa) initn: 5008 init1: 5008 opt: 5008 Z-score: 4349.5 bits: 815.4 E(32554): 0 Smith-Waterman score: 5008; 99.9% identity (100.0% similar) in 721 aa overlap (1-721:1-721) 10 20 30 40 50 60 pF1KE6 MLPRGRPRALGAAALLLLLLLLGFLLFGGDLGCERRKPGGRAGAPGCFPGPLMPRVPPDG ::::::::::::::::::::::::::::::::::::.::::::::::::::::::::::: CCDS31 MLPRGRPRALGAAALLLLLLLLGFLLFGGDLGCERREPGGRAGAPGCFPGPLMPRVPPDG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 RLRRAAALDGDPGAGPGDHNRSDCGPQPPPPPKCELLHVAIVCAGHNSSRDVITLVKSML :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 RLRRAAALDGDPGAGPGDHNRSDCGPQPPPPPKCELLHVAIVCAGHNSSRDVITLVKSML 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 FYRKNPLHLHLVTDAVARNILETLFHTWMVPAVRVSFYHADQLKPQVSWIPNKHYSGLYG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 FYRKNPLHLHLVTDAVARNILETLFHTWMVPAVRVSFYHADQLKPQVSWIPNKHYSGLYG 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 LMKLVLPSALPAELARVIVLDTDVTFASDISELWALFAHFSDTQAIGLVENQSDWYLGNL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 LMKLVLPSALPAELARVIVLDTDVTFASDISELWALFAHFSDTQAIGLVENQSDWYLGNL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE6 WKNHRPWPALGRGFNTGVILLRLDRLRQAGWEQMWRLTARRELLSLPATSLADQDIFNAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 WKNHRPWPALGRGFNTGVILLRLDRLRQAGWEQMWRLTARRELLSLPATSLADQDIFNAV 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE6 IKEHPGLVQRLPCVWNVQLSDHTLAERCYSEASDLKVIHWNSPKKLRVKNKHVEFFRNFY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 IKEHPGLVQRLPCVWNVQLSDHTLAERCYSEASDLKVIHWNSPKKLRVKNKHVEFFRNFY 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE6 LTFLEYDGNLLRRELFVCPSQPPPGAEQLQQALAQLDEEDPCFEFRQQQLTVHRVHVTFL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 LTFLEYDGNLLRRELFVCPSQPPPGAEQLQQALAQLDEEDPCFEFRQQQLTVHRVHVTFL 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE6 PHEPPPPRPHDVTLVAQLSMDRLQMLEALCRHWPGPMSLALYLTDAEAQQFLHFVEASPV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 PHEPPPPRPHDVTLVAQLSMDRLQMLEALCRHWPGPMSLALYLTDAEAQQFLHFVEASPV 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE6 LAARQDVAYHVVYREGPLYPVNQLRNVALAQALTPYVFLSDIDFLPAYSLYDYLRASIEQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 LAARQDVAYHVVYREGPLYPVNQLRNVALAQALTPYVFLSDIDFLPAYSLYDYLRASIEQ 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE6 LGLGSRRKAALVVPAFETLRYRFSFPHSKVELLALLDAGTLYTFRYHEWPRGHAPTDYAR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 LGLGSRRKAALVVPAFETLRYRFSFPHSKVELLALLDAGTLYTFRYHEWPRGHAPTDYAR 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE6 WREAQAPYRVQWAANYEPYVVVPRDCPRYDPRFVGFGWNKVAHIVELDAQEYELLVLPEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 WREAQAPYRVQWAANYEPYVVVPRDCPRYDPRFVGFGWNKVAHIVELDAQEYELLVLPEA 610 620 630 640 650 660 670 680 690 700 710 720 pF1KE6 FTIHLPHAPSLDISRFRSSPTYRDCLQALKDEFHQDLSRHHGAAALKYLPALQQPQSPAR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 FTIHLPHAPSLDISRFRSSPTYRDCLQALKDEFHQDLSRHHGAAALKYLPALQQPQSPAR 670 680 690 700 710 720 pF1KE6 G : CCDS31 G >>CCDS76399.1 LARGE2 gene_id:120071|Hs108|chr11 (690 aa) initn: 4597 init1: 4597 opt: 4597 Z-score: 3993.2 bits: 749.4 E(32554): 4.2e-216 Smith-Waterman score: 4693; 95.7% identity (95.7% similar) in 721 aa overlap (1-721:1-690) 10 20 30 40 50 60 pF1KE6 MLPRGRPRALGAAALLLLLLLLGFLLFGGDLGCERRKPGGRAGAPGCFPGPLMPRVPPDG ::::::::::::::::::::::::::: :: CCDS76 MLPRGRPRALGAAALLLLLLLLGFLLF-------------------------------DG 10 20 70 80 90 100 110 120 pF1KE6 RLRRAAALDGDPGAGPGDHNRSDCGPQPPPPPKCELLHVAIVCAGHNSSRDVITLVKSML :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 RLRRAAALDGDPGAGPGDHNRSDCGPQPPPPPKCELLHVAIVCAGHNSSRDVITLVKSML 30 40 50 60 70 80 130 140 150 160 170 180 pF1KE6 FYRKNPLHLHLVTDAVARNILETLFHTWMVPAVRVSFYHADQLKPQVSWIPNKHYSGLYG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 FYRKNPLHLHLVTDAVARNILETLFHTWMVPAVRVSFYHADQLKPQVSWIPNKHYSGLYG 90 100 110 120 130 140 190 200 210 220 230 240 pF1KE6 LMKLVLPSALPAELARVIVLDTDVTFASDISELWALFAHFSDTQAIGLVENQSDWYLGNL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 LMKLVLPSALPAELARVIVLDTDVTFASDISELWALFAHFSDTQAIGLVENQSDWYLGNL 150 160 170 180 190 200 250 260 270 280 290 300 pF1KE6 WKNHRPWPALGRGFNTGVILLRLDRLRQAGWEQMWRLTARRELLSLPATSLADQDIFNAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 WKNHRPWPALGRGFNTGVILLRLDRLRQAGWEQMWRLTARRELLSLPATSLADQDIFNAV 210 220 230 240 250 260 310 320 330 340 350 360 pF1KE6 IKEHPGLVQRLPCVWNVQLSDHTLAERCYSEASDLKVIHWNSPKKLRVKNKHVEFFRNFY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 IKEHPGLVQRLPCVWNVQLSDHTLAERCYSEASDLKVIHWNSPKKLRVKNKHVEFFRNFY 270 280 290 300 310 320 370 380 390 400 410 420 pF1KE6 LTFLEYDGNLLRRELFVCPSQPPPGAEQLQQALAQLDEEDPCFEFRQQQLTVHRVHVTFL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 LTFLEYDGNLLRRELFVCPSQPPPGAEQLQQALAQLDEEDPCFEFRQQQLTVHRVHVTFL 330 340 350 360 370 380 430 440 450 460 470 480 pF1KE6 PHEPPPPRPHDVTLVAQLSMDRLQMLEALCRHWPGPMSLALYLTDAEAQQFLHFVEASPV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 PHEPPPPRPHDVTLVAQLSMDRLQMLEALCRHWPGPMSLALYLTDAEAQQFLHFVEASPV 390 400 410 420 430 440 490 500 510 520 530 540 pF1KE6 LAARQDVAYHVVYREGPLYPVNQLRNVALAQALTPYVFLSDIDFLPAYSLYDYLRASIEQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 LAARQDVAYHVVYREGPLYPVNQLRNVALAQALTPYVFLSDIDFLPAYSLYDYLRASIEQ 450 460 470 480 490 500 550 560 570 580 590 600 pF1KE6 LGLGSRRKAALVVPAFETLRYRFSFPHSKVELLALLDAGTLYTFRYHEWPRGHAPTDYAR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 LGLGSRRKAALVVPAFETLRYRFSFPHSKVELLALLDAGTLYTFRYHEWPRGHAPTDYAR 510 520 530 540 550 560 610 620 630 640 650 660 pF1KE6 WREAQAPYRVQWAANYEPYVVVPRDCPRYDPRFVGFGWNKVAHIVELDAQEYELLVLPEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 WREAQAPYRVQWAANYEPYVVVPRDCPRYDPRFVGFGWNKVAHIVELDAQEYELLVLPEA 570 580 590 600 610 620 670 680 690 700 710 720 pF1KE6 FTIHLPHAPSLDISRFRSSPTYRDCLQALKDEFHQDLSRHHGAAALKYLPALQQPQSPAR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 FTIHLPHAPSLDISRFRSSPTYRDCLQALKDEFHQDLSRHHGAAALKYLPALQQPQSPAR 630 640 650 660 670 680 pF1KE6 G : CCDS76 G 690 >>CCDS13912.1 LARGE1 gene_id:9215|Hs108|chr22 (756 aa) initn: 3016 init1: 2426 opt: 3149 Z-score: 2736.6 bits: 517.0 E(32554): 4.2e-146 Smith-Waterman score: 3149; 67.3% identity (87.4% similar) in 666 aa overlap (55-711:89-752) 30 40 50 60 70 pF1KE6 LLFGGDLGCERRKPGGRAGAPGCFPGPLMPRVPPDGRLRRAAALDGDPGAGPGDH----- :.: : .. . . . :.: ... CCDS13 QRERESLEVRMREVEEENRALRRQLSLAQGRAPSHRRGNHSKTYSMEEGTGDSENLRAGI 60 70 80 90 100 110 80 90 100 110 120 130 pF1KE6 ---NRSDCGPQPPPPPKCELLHVAIVCAGHNSSRDVITLVKSMLFYRKNPLHLHLVTDAV : :.:: :: ::: .::::::::.:.::::.:::::.::.:.::::.::..:.. CCDS13 VAGNSSECGQQPVVE-KCETIHVAIVCAGYNASRDVVTLVKSVLFHRRNPLHFHLIADSI 120 130 140 150 160 170 140 150 160 170 180 190 pF1KE6 ARNILETLFHTWMVPAVRVSFYHADQLKPQVSWIPNKHYSGLYGLMKLVLPSALPAELAR :..:: :::.:::::::::.::.::.:: .:::::::::::.:::::::: ..:::.: : CCDS13 AEQILATLFQTWMVPAVRVDFYNADELKSEVSWIPNKHYSGIYGLMKLVLTKTLPANLER 180 190 200 210 220 230 200 210 220 230 240 250 pF1KE6 VIVLDTDVTFASDISELWALFAHFSDTQAIGLVENQSDWYLGNLWKNHRPWPALGRGFNT :::::::.:::.::.::::.: .:. :..:::::::::::::::::::::::::::.:: CCDS13 VIVLDTDITFATDIAELWAVFHKFKGQQVLGLVENQSDWYLGNLWKNHRPWPALGRGYNT 240 250 260 270 280 290 260 270 280 290 300 310 pF1KE6 GVILLRLDRLRQAGWEQMWRLTARRELLSLPATSLADQDIFNAVIKEHPGLVQRLPCVWN ::::: ::.::. :::::::::.:::... .::::::::::::::..: :: .::: :: CCDS13 GVILLLLDKLRKMKWEQMWRLTAERELMGMLSTSLADQDIFNAVIKQNPFLVYQLPCFWN 300 310 320 330 340 350 320 330 340 350 360 370 pF1KE6 VQLSDHTLAERCYSEASDLKVIHWNSPKKLRVKNKHVEFFRNFYLTFLEYDGNLLRRELF ::::::: .:.:: ..::::::::::::::::::::::::::.::::::::::::::::: CCDS13 VQLSDHTRSEQCYRDVSDLKVIHWNSPKKLRVKNKHVEFFRNLYLTFLEYDGNLLRRELF 360 370 380 390 400 410 380 390 400 410 420 430 pF1KE6 VCPSQPPPGAEQLQQALAQLDEEDPCFEFRQQQLTVHRVHVTFLPHE-PPPPRPHDVTLV :::. ..:.::. :..:::.: :.:::....::::.:. :: .: : ::::: CCDS13 GCPSEADVNSENLQKQLSELDEDDLCYEFRRERFTVHRTHLYFLHYEYEPAADSTDVTLV 420 430 440 450 460 470 440 450 460 470 480 490 pF1KE6 AQLSMDRLQMLEALCRHWPGPMSLALYLTDAEAQQFLHFVEASPVLAARQDVAYHVVYRE :::::::::::::.:.:: ::.::::::.::::::::.....: :: .:..:.::.::.: CCDS13 AQLSMDRLQMLEAICKHWEGPISLALYLSDAEAQQFLRYAQGSEVLMSRHNVGYHIVYKE 480 490 500 510 520 530 500 510 520 530 540 550 pF1KE6 GPLYPVNQLRNVALAQALTPYVFLSDIDFLPAYSLYDYLRASIEQLGLGSRRKAALVVPA : .:::: :::::. . :::.::::::::: :.::.::: :. :: :.. .:: ..::: CCDS13 GQFYPVNLLRNVAMKHISTPYMFLSDIDFLPMYGLYEYLRKSVIQLDLANTKKA-MIVPA 540 550 560 570 580 590 560 570 580 590 600 610 pF1KE6 FETLRYRFSFPHSKVELLALLDAGTLYTFRYHEWPRGHAPTDYARWREAQAPYRVQWAAN :::::::.:::.::.:::..:: :::.::::: : .:::::..:.:: : .::::.: :. CCDS13 FETLRYRLSFPKSKAELLSMLDMGTLFTFRYHVWTKGHAPTNFAKWRTATTPYRVEWEAD 600 610 620 630 640 650 620 630 640 650 660 670 pF1KE6 YEPYVVVPRDCPRYDPRFVGFGWNKVAHIVELDAQEYELLVLPEAFTIHLPHAPSLDISR .:::::: ::::.:: :::::::::::::.:::.::::..:::.:. ::.:::::.::.. CCDS13 FEPYVVVRRDCPEYDRRFVGFGWNKVAHIMELDVQEYEFIVLPNAYMIHMPHAPSFDITK 660 670 680 690 700 710 680 690 700 710 720 pF1KE6 FRSSPTYRDCLQALKDEFHQDLSRHHGAAALKYLPALQQPQSPARG :::. :: ::..::.::.::.::..: :::::: : CCDS13 FRSNKQYRICLKTLKEEFQQDMSRRYGFAALKYLTAENNS 720 730 740 750 721 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 15:37:22 2016 done: Tue Nov 8 15:37:23 2016 Total Scan time: 3.520 Total Display time: 0.040 Function used was FASTA [36.3.4 Apr, 2011]